RNA–Protein interactions for RNA: ENST00000550208.1

BRF1-216, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 3

Gene BRF1, Length 1,040 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-216ENST00000550208 TANGO2Q6ICL3 276 aa23.81■■□□□ 1.4
BRF1-216ENST00000550208 ZSCAN18Q8TBC5 510 aaPredicted RBP23.81■■□□□ 1.4
BRF1-216ENST00000550208 MRPS31Q92665 395 aaKnown RBP23.81■■□□□ 1.4
BRF1-216ENST00000550208 UBXN6Q9BZV1 441 aa23.81■■□□□ 1.4
BRF1-216ENST00000550208 COMMD8Q9NX08 183 aa23.81■■□□□ 1.4
BRF1-216ENST00000550208 IGSF9Q9P2J2 1179 aa23.81■■□□□ 1.4
BRF1-216ENST00000550208 HESX1Q9UBX0 185 aa23.81■■□□□ 1.4
BRF1-216ENST00000550208 CHORDC1Q9UHD1 332 aaPredicted RBP23.81■■□□□ 1.4
BRF1-216ENST00000550208 NUMBLQ9Y6R0 609 aa23.81■■□□□ 1.4
BRF1-216ENST00000550208 NCOR1O75376 2440 aa23.8■■□□□ 1.4
BRF1-216ENST00000550208 DLL1O00548 723 aa23.8■■□□□ 1.4
BRF1-216ENST00000550208 SERPINC1P01008 464 aa23.8■■□□□ 1.4
BRF1-216ENST00000550208 CLCN1P35523 988 aa23.8■■□□□ 1.4
BRF1-216ENST00000550208 ZNF445P59923 1031 aa23.8■■□□□ 1.4
BRF1-216ENST00000550208 FANCCQ00597 558 aa23.8■■□□□ 1.4
BRF1-216ENST00000550208 PKDCCQ504Y2 493 aa23.8■■□□□ 1.4
BRF1-216ENST00000550208 MON1AQ86VX9 555 aa23.8■■□□□ 1.4
BRF1-216ENST00000550208 MAB21L3Q8N8X9 362 aa23.8■■□□□ 1.4
BRF1-216ENST00000550208 ZNF606Q8WXB4 792 aa23.8■■□□□ 1.4
BRF1-216ENST00000550208 FBXO32Q969P5 355 aa23.8■■□□□ 1.4
BRF1-216ENST00000550208 TTC28Q96AY4 2481 aa23.8■■□□□ 1.4
BRF1-216ENST00000550208 ASB16Q96NS5 453 aa23.8■■□□□ 1.4
BRF1-216ENST00000550208 STK33Q9BYT3 514 aa23.8■■□□□ 1.4
BRF1-216ENST00000550208 PLA2G2FQ9BZM2 168 aa23.8■■□□□ 1.4
BRF1-216ENST00000550208 TRPM5Q9NZQ8 1165 aa23.8■■□□□ 1.4
BRF1-216ENST00000550208 WDR3Q9UNX4 943 aaKnown RBP eCLIP23.8■■□□□ 1.4
BRF1-216ENST00000550208 A0A1B0GTH6 734 aa23.79■■□□□ 1.4
BRF1-216ENST00000550208 VIPR2P41587 438 aa23.79■■□□□ 1.4
BRF1-216ENST00000550208 BCAT1P54687 386 aa23.79■■□□□ 1.4
BRF1-216ENST00000550208 POLR2FP61218 127 aaKnown RBP23.79■■□□□ 1.4
BRF1-216ENST00000550208 NR1I3Q14994 352 aa23.79■■□□□ 1.4
BRF1-216ENST00000550208 STILQ15468 1287 aa23.79■■□□□ 1.4
BRF1-216ENST00000550208 MTSS1LQ765P7 747 aa23.79■■□□□ 1.4
BRF1-216ENST00000550208 PIGZQ86VD9 579 aa23.79■■□□□ 1.4
BRF1-216ENST00000550208 ARID3BQ8IVW6 561 aaPredicted RBP23.79■■□□□ 1.4
BRF1-216ENST00000550208 FAM71AQ8IYT1 594 aa23.79■■□□□ 1.4
BRF1-216ENST00000550208 SLC44A3Q8N4M1 653 aa23.79■■□□□ 1.4
BRF1-216ENST00000550208 NEK11Q8NG66 645 aa23.79■■□□□ 1.4
BRF1-216ENST00000550208 SMARCD2Q92925 531 aa23.79■■□□□ 1.4
BRF1-216ENST00000550208 NXPE3Q969Y0 559 aa23.79■■□□□ 1.4
BRF1-216ENST00000550208 KXD1Q9BQD3 176 aa23.79■■□□□ 1.4
BRF1-216ENST00000550208 PNPLA8Q9NP80 782 aa23.79■■□□□ 1.4
BRF1-216ENST00000550208 ZNF638Q14966 1978 aaKnown RBP23.79■■□□□ 1.4
BRF1-216ENST00000550208 FAM92AA1XBS5 289 aa23.78■■□□□ 1.4
BRF1-216ENST00000550208 ZNF840PA6NDX5 716 aa23.78■■□□□ 1.4
BRF1-216ENST00000550208 THAP12O43422 761 aa23.78■■□□□ 1.4
BRF1-216ENST00000550208 ABL1P00519 1130 aa23.78■■□□□ 1.4
BRF1-216ENST00000550208 RFX1P22670 979 aa23.78■■□□□ 1.4
BRF1-216ENST00000550208 FCARP24071 287 aa23.78■■□□□ 1.4
BRF1-216ENST00000550208 GNA15P30679 374 aa23.78■■□□□ 1.4
BRF1-216ENST00000550208 KIF11P52732 1056 aa23.78■■□□□ 1.4
BRF1-216ENST00000550208 SLC8A3P57103 927 aa23.78■■□□□ 1.4
BRF1-216ENST00000550208 BST2Q10589 180 aaKnown RBP23.78■■□□□ 1.4
BRF1-216ENST00000550208 SMYD5Q6GMV2 418 aa23.78■■□□□ 1.4
BRF1-216ENST00000550208 SLITRK1Q96PX8 696 aa23.78■■□□□ 1.4
BRF1-216ENST00000550208 CYP2S1Q96SQ9 504 aa23.78■■□□□ 1.4
BRF1-216ENST00000550208 SMOC2Q9H3U7 446 aa23.78■■□□□ 1.4
BRF1-216ENST00000550208 FBXO44Q9H4M3 255 aa23.78■■□□□ 1.4
BRF1-216ENST00000550208 ZFP14Q9HCL3 533 aa23.78■■□□□ 1.4
BRF1-216ENST00000550208 TRPC7Q9HCX4 862 aa23.78■■□□□ 1.4
BRF1-216ENST00000550208 NLRC4Q9NPP4 1024 aa23.78■■□□□ 1.4
BRF1-216ENST00000550208 DENND4CQ5VZ89 1909 aa23.78■■□□□ 1.4
BRF1-216ENST00000550208 C2orf78A6NCI8 922 aa23.77■■□□□ 1.4
BRF1-216ENST00000550208 M0QYV0 167 aa23.77■■□□□ 1.4
BRF1-216ENST00000550208 XPO1O14980 1071 aaKnown RBP23.77■■□□□ 1.4
BRF1-216ENST00000550208 CFHP08603 1231 aa23.77■■□□□ 1.4
BRF1-216ENST00000550208 DDX6P26196 483 aaKnown RBP eCLIP23.77■■□□□ 1.4
BRF1-216ENST00000550208 PPP3CCP48454 512 aa23.77■■□□□ 1.4
BRF1-216ENST00000550208 PGFP49763 221 aa23.77■■□□□ 1.4
BRF1-216ENST00000550208 PTK2Q05397 1052 aa23.77■■□□□ 1.4
BRF1-216ENST00000550208 TDGQ13569 410 aa23.77■■□□□ 1.4
BRF1-216ENST00000550208 DENND1BQ6P3S1 775 aa23.77■■□□□ 1.4
BRF1-216ENST00000550208 CMTM8Q8IZV2 173 aa23.77■■□□□ 1.4
BRF1-216ENST00000550208 RNF214Q8ND24 703 aa23.77■■□□□ 1.4
BRF1-216ENST00000550208 SLC35F5Q8WV83 523 aa23.77■■□□□ 1.4
BRF1-216ENST00000550208 SECISBP2LQ93073 1101 aaKnown RBP23.77■■□□□ 1.4
BRF1-216ENST00000550208 SLC22A12Q96S37 553 aa23.77■■□□□ 1.4
BRF1-216ENST00000550208 SMG9Q9H0W8 520 aaKnown RBP23.77■■□□□ 1.4
BRF1-216ENST00000550208 TRPV4Q9HBA0 871 aa23.77■■□□□ 1.4
BRF1-216ENST00000550208 GMIPQ9P107 970 aa23.77■■□□□ 1.4
BRF1-216ENST00000550208 SORCS3Q9UPU3 1222 aa23.77■■□□□ 1.4
BRF1-216ENST00000550208 SOBPA7XYQ1 873 aa23.76■■□□□ 1.39
BRF1-216ENST00000550208 MED7O43513 233 aa23.76■■□□□ 1.39
BRF1-216ENST00000550208 ECI2O75521 394 aa23.76■■□□□ 1.39
BRF1-216ENST00000550208 WEE1P30291 646 aa23.76■■□□□ 1.39
BRF1-216ENST00000550208 RAB41Q5JT25 222 aa23.76■■□□□ 1.39
BRF1-216ENST00000550208 SLC47A2Q86VL8 602 aa23.76■■□□□ 1.39
BRF1-216ENST00000550208 ARL14EPQ8N8R7 260 aaPredicted RBP23.76■■□□□ 1.39
BRF1-216ENST00000550208 OVCA2Q8WZ82 227 aa23.76■■□□□ 1.39
BRF1-216ENST00000550208 ELSPBP1Q96BH3 223 aa23.76■■□□□ 1.39
BRF1-216ENST00000550208 RSPRY1Q96DX4 576 aa23.76■■□□□ 1.39
BRF1-216ENST00000550208 ZMYM5Q9UJ78 669 aa23.76■■□□□ 1.39
BRF1-216ENST00000550208 SCML2Q9UQR0 700 aa23.76■■□□□ 1.39
BRF1-216ENST00000550208 USP3Q9Y6I4 520 aa23.76■■□□□ 1.39
BRF1-216ENST00000550208 VCANP13611 3396 aa23.75■■□□□ 1.39
BRF1-216ENST00000550208 OBSL1O75147 1896 aa23.75■■□□□ 1.39
BRF1-216ENST00000550208 PI4K2BG5E9Z4 385 aa23.75■■□□□ 1.39
BRF1-216ENST00000550208 DCXO43602 365 aa23.75■■□□□ 1.39
BRF1-216ENST00000550208 GABBR2O75899 941 aa23.75■■□□□ 1.39
BRF1-216ENST00000550208 ZDHHC11BP0C7U3 371 aa23.75■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms