RNA–Protein interactions for RNA: ENST00000550102.5

CHMP1A-208, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 5 BASIC

Gene CHMP1A, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-208ENST00000550102 FBXO32Q969P5 355 aa18.26■□□□□ 0.51
CHMP1A-208ENST00000550102 ZFYVE19Q96K21 471 aa18.26■□□□□ 0.51
CHMP1A-208ENST00000550102 SLC22A12Q96S37 553 aa18.26■□□□□ 0.51
CHMP1A-208ENST00000550102 HNRNPABQ99729 332 aaKnown RBP18.26■□□□□ 0.51
CHMP1A-208ENST00000550102 SRRTQ9BXP5 876 aaKnown RBP18.26■□□□□ 0.51
CHMP1A-208ENST00000550102 CSNK1G1Q9HCP0 422 aa18.26■□□□□ 0.51
CHMP1A-208ENST00000550102 LMBRD1Q9NUN5 540 aa18.26■□□□□ 0.51
CHMP1A-208ENST00000550102 ZNF840PA6NDX5 716 aa18.25■□□□□ 0.51
CHMP1A-208ENST00000550102 GOLGA6L22H0YM25 854 aa18.25■□□□□ 0.51
CHMP1A-208ENST00000550102 TNFRSF10BO14763 440 aa18.25■□□□□ 0.51
CHMP1A-208ENST00000550102 P4HA2O15460 535 aa18.25■□□□□ 0.51
CHMP1A-208ENST00000550102 CCDC192P0DO97 292 aa18.25■□□□□ 0.51
CHMP1A-208ENST00000550102 CD72P21854 359 aa18.25■□□□□ 0.51
CHMP1A-208ENST00000550102 TBXAS1P24557 533 aaPredicted RBP18.25■□□□□ 0.51
CHMP1A-208ENST00000550102 KPNA1P52294 538 aaPredicted RBP18.25■□□□□ 0.51
CHMP1A-208ENST00000550102 MLLT6P55198 1093 aaPredicted RBP18.25■□□□□ 0.51
CHMP1A-208ENST00000550102 ZNF394Q53GI3 561 aa18.25■□□□□ 0.51
CHMP1A-208ENST00000550102 CC2D1AQ6P1N0 951 aaPredicted RBP18.25■□□□□ 0.51
CHMP1A-208ENST00000550102 C1orf228Q6PIY5 440 aa18.25■□□□□ 0.51
CHMP1A-208ENST00000550102 ARL14EPQ8N8R7 260 aaPredicted RBP18.25■□□□□ 0.51
CHMP1A-208ENST00000550102 TATDN2Q93075 761 aa18.25■□□□□ 0.51
CHMP1A-208ENST00000550102 CYFIP2Q96F07 1278 aa18.25■□□□□ 0.51
CHMP1A-208ENST00000550102 NELL2Q99435 816 aa18.25■□□□□ 0.51
CHMP1A-208ENST00000550102 SMOQ99835 787 aa18.25■□□□□ 0.51
CHMP1A-208ENST00000550102 GCNT4Q9P109 453 aa18.25■□□□□ 0.51
CHMP1A-208ENST00000550102 DLGAP2Q9P1A6 1054 aa18.25■□□□□ 0.51
CHMP1A-208ENST00000550102 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.25■□□□□ 0.51
CHMP1A-208ENST00000550102 FAM170BA6NMN3 283 aa18.24■□□□□ 0.51
CHMP1A-208ENST00000550102 HDCP19113 662 aa18.24■□□□□ 0.51
CHMP1A-208ENST00000550102 TARSP26639 723 aaKnown RBP18.24■□□□□ 0.51
CHMP1A-208ENST00000550102 MAGEA9P43362 315 aa18.24■□□□□ 0.51
CHMP1A-208ENST00000550102 MAP3K7CLP57077 242 aa18.24■□□□□ 0.51
CHMP1A-208ENST00000550102 MTF1Q14872 753 aa18.24■□□□□ 0.51
CHMP1A-208ENST00000550102 ZNF77Q15935 545 aa18.24■□□□□ 0.51
CHMP1A-208ENST00000550102 CLEC20AQ6ZU45 233 aa18.24■□□□□ 0.51
CHMP1A-208ENST00000550102 ZMIZ2Q8NF64 920 aa18.24■□□□□ 0.51
CHMP1A-208ENST00000550102 SCAMP5Q8TAC9 235 aa18.24■□□□□ 0.51
CHMP1A-208ENST00000550102 NT5C1BQ96P26 610 aa18.24■□□□□ 0.51
CHMP1A-208ENST00000550102 CYP2S1Q96SQ9 504 aa18.24■□□□□ 0.51
CHMP1A-208ENST00000550102 C8orf33Q9H7E9 229 aaPredicted RBP18.24■□□□□ 0.51
CHMP1A-208ENST00000550102 PNPLA8Q9NP80 782 aa18.24■□□□□ 0.51
CHMP1A-208ENST00000550102 COMMD8Q9NX08 183 aa18.24■□□□□ 0.51
CHMP1A-208ENST00000550102 ARHGAP26Q9UNA1 814 aa18.24■□□□□ 0.51
CHMP1A-208ENST00000550102 CACNA1IQ9P0X4 2223 aa18.24■□□□□ 0.51
CHMP1A-208ENST00000550102 NCAM2O15394 837 aa18.23■□□□□ 0.51
CHMP1A-208ENST00000550102 BEST1O76090 585 aa18.23■□□□□ 0.51
CHMP1A-208ENST00000550102 ABL1P00519 1130 aa18.23■□□□□ 0.51
CHMP1A-208ENST00000550102 OAS1P00973 400 aaKnown RBP18.23■□□□□ 0.51
CHMP1A-208ENST00000550102 AFPP02771 609 aaKnown RBP18.23■□□□□ 0.51
CHMP1A-208ENST00000550102 RAD23BP54727 409 aa18.23■□□□□ 0.51
CHMP1A-208ENST00000550102 LRMPQ12912 555 aa18.23■□□□□ 0.51
CHMP1A-208ENST00000550102 PDGFRLQ15198 375 aa18.23■□□□□ 0.51
CHMP1A-208ENST00000550102 ITPRIPL2Q3MIP1 535 aa18.23■□□□□ 0.51
CHMP1A-208ENST00000550102 DPCR1Q3MIW9 517 aa18.23■□□□□ 0.51
CHMP1A-208ENST00000550102 RALGPS2Q86X27 583 aaPredicted RBP18.23■□□□□ 0.51
CHMP1A-208ENST00000550102 SLC4A11Q8NBS3 891 aa18.23■□□□□ 0.51
CHMP1A-208ENST00000550102 TTC16Q8NEE8 873 aa18.23■□□□□ 0.51
CHMP1A-208ENST00000550102 RIN3Q8TB24 985 aa18.23■□□□□ 0.51
CHMP1A-208ENST00000550102 FAM3CQ92520 227 aa18.23■□□□□ 0.51
CHMP1A-208ENST00000550102 JAKMIP2Q96AA8 810 aa18.23■□□□□ 0.51
CHMP1A-208ENST00000550102 TMEM176AQ96HP8 235 aa18.23■□□□□ 0.51
CHMP1A-208ENST00000550102 CNOT6LQ96LI5 555 aaKnown RBP18.23■□□□□ 0.51
CHMP1A-208ENST00000550102 HEXIM2Q96MH2 286 aaKnown RBP18.23■□□□□ 0.51
CHMP1A-208ENST00000550102 FBXO44Q9H4M3 255 aa18.23■□□□□ 0.51
CHMP1A-208ENST00000550102 GKN1Q9NS71 199 aa18.23■□□□□ 0.51
CHMP1A-208ENST00000550102 GTSE1Q9NYZ3 720 aa18.23■□□□□ 0.51
CHMP1A-208ENST00000550102 IL37Q9NZH6 218 aa18.23■□□□□ 0.51
CHMP1A-208ENST00000550102 DACH1Q9UI36 760 aa18.23■□□□□ 0.51
CHMP1A-208ENST00000550102 NDRG2Q9UN36 371 aaKnown RBP18.23■□□□□ 0.51
CHMP1A-208ENST00000550102 MTF2Q9Y483 593 aaPredicted RBP18.23■□□□□ 0.51
CHMP1A-208ENST00000550102 FANCMQ8IYD8 2048 aa18.23■□□□□ 0.51
CHMP1A-208ENST00000550102 FAM92AA1XBS5 289 aa18.22■□□□□ 0.51
CHMP1A-208ENST00000550102 SHISA7A6NL88 538 aa18.22■□□□□ 0.51
CHMP1A-208ENST00000550102 SPECC1L-ADORA2AF8WAN1 911 aa18.22■□□□□ 0.51
CHMP1A-208ENST00000550102 OLFM2O95897 454 aa18.22■□□□□ 0.51
CHMP1A-208ENST00000550102 TCF3P15923 654 aa18.22■□□□□ 0.51
CHMP1A-208ENST00000550102 CTHP32929 405 aa18.22■□□□□ 0.51
CHMP1A-208ENST00000550102 TUBP50607 506 aa18.22■□□□□ 0.51
CHMP1A-208ENST00000550102 TNK2Q07912 1038 aa18.22■□□□□ 0.51
CHMP1A-208ENST00000550102 KCNH2Q12809 1159 aa18.22■□□□□ 0.51
CHMP1A-208ENST00000550102 PPP1R26Q5T8A7 1209 aaPredicted RBP18.22■□□□□ 0.51
CHMP1A-208ENST00000550102 SH3RF2Q8TEC5 729 aa18.22■□□□□ 0.51
CHMP1A-208ENST00000550102 FAM83CQ9BQN1 747 aa18.22■□□□□ 0.51
CHMP1A-208ENST00000550102 GMIPQ9P107 970 aa18.22■□□□□ 0.51
CHMP1A-208ENST00000550102 KIAA1549LQ6ZVL6 1849 aa18.21■□□□□ 0.51
CHMP1A-208ENST00000550102 H0Y858 1186 aa18.21■□□□□ 0.51
CHMP1A-208ENST00000550102 HOXD11P31277 338 aaPredicted RBP18.21■□□□□ 0.51
CHMP1A-208ENST00000550102 RPS9P46781 194 aaKnown RBP18.21■□□□□ 0.51
CHMP1A-208ENST00000550102 SOX9P48436 509 aa18.21■□□□□ 0.51
CHMP1A-208ENST00000550102 SLC7A9P82251 487 aa18.21■□□□□ 0.51
CHMP1A-208ENST00000550102 ANGPT1Q15389 498 aa18.21■□□□□ 0.51
CHMP1A-208ENST00000550102 TPD52L1Q16890 204 aaPredicted RBP18.21■□□□□ 0.51
CHMP1A-208ENST00000550102 ARHGAP17Q68EM7 881 aa18.21■□□□□ 0.51
CHMP1A-208ENST00000550102 GPRIN1Q7Z2K8 1008 aa18.21■□□□□ 0.51
CHMP1A-208ENST00000550102 PPM1KQ8N3J5 372 aa18.21■□□□□ 0.51
CHMP1A-208ENST00000550102 TTC8Q8TAM2 541 aa18.21■□□□□ 0.51
CHMP1A-208ENST00000550102 ATP2A3Q93084 1043 aa18.21■□□□□ 0.51
CHMP1A-208ENST00000550102 CLDN23Q96B33 292 aa18.21■□□□□ 0.51
CHMP1A-208ENST00000550102 EBF3Q9H4W6 596 aa18.21■□□□□ 0.51
CHMP1A-208ENST00000550102 HPS4Q9NQG7 708 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms