RNA–Protein interactions for RNA: ENST00000547208.5

BEST3-208, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 1,187 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-208ENST00000547208 KCNK16Q96T55 309 aa10.97□□□□□ -0.65
BEST3-208ENST00000547208 APOBEC3GQ9HC16 384 aaKnown RBP10.97□□□□□ -0.65
BEST3-208ENST00000547208 C2orf42Q9NWW7 574 aa10.97□□□□□ -0.65
BEST3-208ENST00000547208 ZSCAN32Q9NX65 697 aa10.97□□□□□ -0.65
BEST3-208ENST00000547208 HMGXB4Q9UGU5 601 aa10.97□□□□□ -0.65
BEST3-208ENST00000547208 RALYQ9UKM9 306 aaKnown RBP10.97□□□□□ -0.65
BEST3-208ENST00000547208 ARHGAP26Q9UNA1 814 aa10.97□□□□□ -0.65
BEST3-208ENST00000547208 FRMD4BQ9Y2L6 1034 aa10.97□□□□□ -0.65
BEST3-208ENST00000547208 KMT2BQ9UMN6 2715 aaPredicted RBP10.97□□□□□ -0.65
BEST3-208ENST00000547208 TNFRSF10BO14763 440 aa10.96□□□□□ -0.65
BEST3-208ENST00000547208 KIF20AO95235 890 aa10.96□□□□□ -0.65
BEST3-208ENST00000547208 HLA-DRAP01903 254 aa10.96□□□□□ -0.65
BEST3-208ENST00000547208 CKMP06732 381 aa10.96□□□□□ -0.65
BEST3-208ENST00000547208 TRIM49P0CI25 452 aa10.96□□□□□ -0.65
BEST3-208ENST00000547208 TRIM49CP0CI26 452 aa10.96□□□□□ -0.65
BEST3-208ENST00000547208 PFKLP17858 780 aa10.96□□□□□ -0.65
BEST3-208ENST00000547208 HDCP19113 662 aa10.96□□□□□ -0.65
BEST3-208ENST00000547208 ANXA13P27216 316 aa10.96□□□□□ -0.65
BEST3-208ENST00000547208 GCLMP48507 274 aa10.96□□□□□ -0.65
BEST3-208ENST00000547208 NDST1P52848 882 aa10.96□□□□□ -0.65
BEST3-208ENST00000547208 NUCB2P80303 420 aa10.96□□□□□ -0.65
BEST3-208ENST00000547208 FOXK2Q01167 660 aa10.96□□□□□ -0.65
BEST3-208ENST00000547208 SATB1Q01826 763 aa10.96□□□□□ -0.65
BEST3-208ENST00000547208 LRRC32Q14392 662 aa10.96□□□□□ -0.65
BEST3-208ENST00000547208 EML3Q32P44 896 aa10.96□□□□□ -0.65
BEST3-208ENST00000547208 EDRF1Q3B7T1 1238 aa10.96□□□□□ -0.65
BEST3-208ENST00000547208 TMEM196Q5HYL7 178 aa10.96□□□□□ -0.65
BEST3-208ENST00000547208 DGKKQ5KSL6 1271 aa10.96□□□□□ -0.65
BEST3-208ENST00000547208 NAIF1Q69YI7 327 aaPredicted RBP10.96□□□□□ -0.65
BEST3-208ENST00000547208 FSTL4Q6MZW2 842 aa10.96□□□□□ -0.65
BEST3-208ENST00000547208 INTS8Q75QN2 995 aaKnown RBP10.96□□□□□ -0.65
BEST3-208ENST00000547208 ACOT1Q86TX2 421 aa10.96□□□□□ -0.65
BEST3-208ENST00000547208 FAM35AQ86V20 835 aa10.96□□□□□ -0.65
BEST3-208ENST00000547208 FAM186BQ8IYM0 893 aa10.96□□□□□ -0.65
BEST3-208ENST00000547208 FUKQ8N0W3 1084 aa10.96□□□□□ -0.65
BEST3-208ENST00000547208 CRYBG2Q8N1P7 616 aa10.96□□□□□ -0.65
BEST3-208ENST00000547208 SPEM1Q8N4L4 309 aa10.96□□□□□ -0.65
BEST3-208ENST00000547208 ZMIZ2Q8NF64 920 aa10.96□□□□□ -0.65
BEST3-208ENST00000547208 TAS1R2Q8TE23 839 aa10.96□□□□□ -0.65
BEST3-208ENST00000547208 SH3RF2Q8TEC5 729 aa10.96□□□□□ -0.65
BEST3-208ENST00000547208 OSCP1Q8WVF1 389 aa10.96□□□□□ -0.65
BEST3-208ENST00000547208 TAF4BQ92750 862 aa10.96□□□□□ -0.65
BEST3-208ENST00000547208 RNF38Q9H0F5 515 aa10.96□□□□□ -0.65
BEST3-208ENST00000547208 MAP1BP46821 2468 aaKnown RBP10.96□□□□□ -0.66
BEST3-208ENST00000547208 K7ESF4 209 aa10.95□□□□□ -0.66
BEST3-208ENST00000547208 TRDMT1O14717 391 aaKnown RBP10.95□□□□□ -0.66
BEST3-208ENST00000547208 KINO60870 393 aaKnown RBP10.95□□□□□ -0.66
BEST3-208ENST00000547208 BEST1O76090 585 aa10.95□□□□□ -0.66
BEST3-208ENST00000547208 PAPSS2O95340 614 aaPredicted RBP10.95□□□□□ -0.66
BEST3-208ENST00000547208 OAS1P00973 400 aaKnown RBP10.95□□□□□ -0.66
BEST3-208ENST00000547208 CCDC130P13994 396 aa10.95□□□□□ -0.66
BEST3-208ENST00000547208 HOXC13P31276 330 aa10.95□□□□□ -0.66
BEST3-208ENST00000547208 PSMC2P35998 433 aaKnown RBP10.95□□□□□ -0.66
BEST3-208ENST00000547208 PIK3CAP42336 1068 aa10.95□□□□□ -0.66
BEST3-208ENST00000547208 PRCPP42785 496 aa10.95□□□□□ -0.66
BEST3-208ENST00000547208 PPP3CCP48454 512 aa10.95□□□□□ -0.66
BEST3-208ENST00000547208 CCR3P51677 355 aa10.95□□□□□ -0.66
BEST3-208ENST00000547208 SLC7A9P82251 487 aa10.95□□□□□ -0.66
BEST3-208ENST00000547208 INCA1Q0VD86 236 aa10.95□□□□□ -0.66
BEST3-208ENST00000547208 TAF10Q12962 218 aa10.95□□□□□ -0.66
BEST3-208ENST00000547208 ORC1Q13415 861 aa10.95□□□□□ -0.66
BEST3-208ENST00000547208 ADAM9Q13443 819 aa10.95□□□□□ -0.66
BEST3-208ENST00000547208 PDGFRLQ15198 375 aa10.95□□□□□ -0.66
BEST3-208ENST00000547208 COBLL1Q53SF7 1204 aa10.95□□□□□ -0.66
BEST3-208ENST00000547208 PKN3Q6P5Z2 889 aa10.95□□□□□ -0.66
BEST3-208ENST00000547208 ERMP1Q7Z2K6 904 aa10.95□□□□□ -0.66
BEST3-208ENST00000547208 ZC3H3Q8IXZ2 948 aaKnown RBP10.95□□□□□ -0.66
BEST3-208ENST00000547208 NUP93Q8N1F7 819 aa10.95□□□□□ -0.66
BEST3-208ENST00000547208 SCAMP5Q8TAC9 235 aa10.95□□□□□ -0.66
BEST3-208ENST00000547208 ERCC4Q92889 916 aaPredicted RBP10.95□□□□□ -0.66
BEST3-208ENST00000547208 EEF2KMTQ96G04 330 aa10.95□□□□□ -0.66
BEST3-208ENST00000547208 TNIP3Q96KP6 325 aa10.95□□□□□ -0.66
BEST3-208ENST00000547208 TWNKQ96RR1 684 aa10.95□□□□□ -0.66
BEST3-208ENST00000547208 FAM126AQ9BYI3 521 aaPredicted RBP10.95□□□□□ -0.66
BEST3-208ENST00000547208 EPC1Q9H2F5 836 aa10.95□□□□□ -0.66
BEST3-208ENST00000547208 LINC00597Q9H2U6 94 aa10.95□□□□□ -0.66
BEST3-208ENST00000547208 ECT2Q9H8V3 914 aa10.95□□□□□ -0.66
BEST3-208ENST00000547208 FBRSL1Q9HCM7 1045 aaKnown RBP10.95□□□□□ -0.66
BEST3-208ENST00000547208 CSNK1G1Q9HCP0 422 aa10.95□□□□□ -0.66
BEST3-208ENST00000547208 IL37Q9NZH6 218 aa10.95□□□□□ -0.66
BEST3-208ENST00000547208 EHD2Q9NZN4 543 aa10.95□□□□□ -0.66
BEST3-208ENST00000547208 TRPM5Q9NZQ8 1165 aa10.95□□□□□ -0.66
BEST3-208ENST00000547208 WNT6Q9Y6F9 365 aa10.95□□□□□ -0.66
BEST3-208ENST00000547208 FAM92AA1XBS5 289 aa10.94□□□□□ -0.66
BEST3-208ENST00000547208 P4HA1P13674 534 aa10.94□□□□□ -0.66
BEST3-208ENST00000547208 RPL13P26373 211 aaKnown RBP10.94□□□□□ -0.66
BEST3-208ENST00000547208 YWHAQP27348 245 aa10.94□□□□□ -0.66
BEST3-208ENST00000547208 GJA4P35212 333 aa10.94□□□□□ -0.66
BEST3-208ENST00000547208 CXCL12P48061 93 aa10.94□□□□□ -0.66
BEST3-208ENST00000547208 PDE6CP51160 858 aa10.94□□□□□ -0.66
BEST3-208ENST00000547208 SLC5A3P53794 718 aa10.94□□□□□ -0.66
BEST3-208ENST00000547208 PMS1P54277 932 aaKnown RBP10.94□□□□□ -0.66
BEST3-208ENST00000547208 DMWDQ09019 674 aa10.94□□□□□ -0.66
BEST3-208ENST00000547208 GAB4Q2WGN9 574 aa10.94□□□□□ -0.66
BEST3-208ENST00000547208 ZNF658Q5TYW1 1059 aaPredicted RBP10.94□□□□□ -0.66
BEST3-208ENST00000547208 SNX30Q5VWJ9 437 aa10.94□□□□□ -0.66
BEST3-208ENST00000547208 CC2D1AQ6P1N0 951 aaPredicted RBP10.94□□□□□ -0.66
BEST3-208ENST00000547208 UNC93AQ86WB7 457 aa10.94□□□□□ -0.66
BEST3-208ENST00000547208 SYNPOQ8N3V7 929 aa10.94□□□□□ -0.66
BEST3-208ENST00000547208 C12orf29Q8N999 325 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms