RNA–Protein interactions for RNA: ENST00000546997.1

BRF1-208, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-208ENST00000546997 C6orf118Q5T5N4 469 aa17.32■□□□□ 0.36
BRF1-208ENST00000546997 LRRC52Q8N7C0 313 aa17.32■□□□□ 0.36
BRF1-208ENST00000546997 PABPC3Q9H361 631 aaKnown RBP17.32■□□□□ 0.36
BRF1-208ENST00000546997 SLC38A7Q9NVC3 462 aa17.32■□□□□ 0.36
BRF1-208ENST00000546997 PCDHB4Q9Y5E5 795 aa17.32■□□□□ 0.36
BRF1-208ENST00000546997 KIAA0355O15063 1070 aa17.31■□□□□ 0.36
BRF1-208ENST00000546997 TIMP1P01033 207 aa17.31■□□□□ 0.36
BRF1-208ENST00000546997 NQO1P15559 274 aaKnown RBP17.31■□□□□ 0.36
BRF1-208ENST00000546997 LRPAP1P30533 357 aa17.31■□□□□ 0.36
BRF1-208ENST00000546997 ADCY2Q08462 1091 aa17.31■□□□□ 0.36
BRF1-208ENST00000546997 BZW1Q7L1Q6 419 aaKnown RBP17.31■□□□□ 0.36
BRF1-208ENST00000546997 DDX42Q86XP3 938 aaKnown RBP eCLIP17.31■□□□□ 0.36
BRF1-208ENST00000546997 UBN1Q9NPG3 1134 aa17.31■□□□□ 0.36
BRF1-208ENST00000546997 SPATS2LQ9NUQ6 558 aaKnown RBP17.31■□□□□ 0.36
BRF1-208ENST00000546997 TMEM161AQ9NX61 479 aa17.31■□□□□ 0.36
BRF1-208ENST00000546997 CNTN6Q9UQ52 1028 aa17.31■□□□□ 0.36
BRF1-208ENST00000546997 CASTOR2A6NHX0 329 aa17.31■□□□□ 0.36
BRF1-208ENST00000546997 INPPL1O15357 1258 aa17.31■□□□□ 0.36
BRF1-208ENST00000546997 CHN1P15882 459 aa17.31■□□□□ 0.36
BRF1-208ENST00000546997 CLCNKBP51801 687 aa17.31■□□□□ 0.36
BRF1-208ENST00000546997 ZNF132P52740 706 aa17.31■□□□□ 0.36
BRF1-208ENST00000546997 ACCSLQ4AC99 568 aa17.31■□□□□ 0.36
BRF1-208ENST00000546997 CRIPAKQ8N1N5 446 aa17.31■□□□□ 0.36
BRF1-208ENST00000546997 RBBP8NLQ8NC74 664 aaPredicted RBP17.31■□□□□ 0.36
BRF1-208ENST00000546997 STAMBPL1Q96FJ0 436 aa17.31■□□□□ 0.36
BRF1-208ENST00000546997 SH3GL3Q99963 347 aa17.31■□□□□ 0.36
BRF1-208ENST00000546997 DDX47Q9H0S4 455 aaKnown RBP17.31■□□□□ 0.36
BRF1-208ENST00000546997 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.31■□□□□ 0.36
BRF1-208ENST00000546997 CTTNBP2NLQ9P2B4 639 aa17.31■□□□□ 0.36
BRF1-208ENST00000546997 HMGXB4Q9UGU5 601 aa17.31■□□□□ 0.36
BRF1-208ENST00000546997 SNX9Q9Y5X1 595 aa17.31■□□□□ 0.36
BRF1-208ENST00000546997 O00370 1275 aa17.3■□□□□ 0.36
BRF1-208ENST00000546997 DDX3YO15523 660 aaKnown RBP17.3■□□□□ 0.36
BRF1-208ENST00000546997 B4GALT3O60512 393 aa17.3■□□□□ 0.36
BRF1-208ENST00000546997 WFS1O76024 890 aa17.3■□□□□ 0.36
BRF1-208ENST00000546997 RPSAP08865 295 aaKnown RBP17.3■□□□□ 0.36
BRF1-208ENST00000546997 CSF2RAP15509 400 aa17.3■□□□□ 0.36
BRF1-208ENST00000546997 FLT3P36888 993 aa17.3■□□□□ 0.36
BRF1-208ENST00000546997 DHX34Q14147 1143 aaKnown RBP17.3■□□□□ 0.36
BRF1-208ENST00000546997 GALNTL6Q49A17 601 aa17.3■□□□□ 0.36
BRF1-208ENST00000546997 ZNF394Q53GI3 561 aa17.3■□□□□ 0.36
BRF1-208ENST00000546997 COL13A1Q5TAT6 717 aaPredicted RBP17.3■□□□□ 0.36
BRF1-208ENST00000546997 GLB1LQ6UWU2 654 aa17.3■□□□□ 0.36
BRF1-208ENST00000546997 C3orf58Q8NDZ4 430 aa17.3■□□□□ 0.36
BRF1-208ENST00000546997 MTA2O94776 668 aa17.29■□□□□ 0.36
BRF1-208ENST00000546997 OAS1P00973 400 aaKnown RBP17.29■□□□□ 0.36
BRF1-208ENST00000546997 RAG1P15918 1043 aa17.29■□□□□ 0.36
BRF1-208ENST00000546997 GATMP50440 423 aa17.29■□□□□ 0.36
BRF1-208ENST00000546997 LILRA4P59901 499 aa17.29■□□□□ 0.36
BRF1-208ENST00000546997 TNFAIP8L3Q5GJ75 292 aa17.29■□□□□ 0.36
BRF1-208ENST00000546997 DUPD1Q68J44 220 aa17.29■□□□□ 0.36
BRF1-208ENST00000546997 TEX9Q8N6V9 391 aa17.29■□□□□ 0.36
BRF1-208ENST00000546997 ZNF483Q8TF39 744 aaPredicted RBP17.29■□□□□ 0.36
BRF1-208ENST00000546997 ZNF560Q96MR9 790 aa17.29■□□□□ 0.36
BRF1-208ENST00000546997 AMACRQ9UHK6 382 aa17.29■□□□□ 0.36
BRF1-208ENST00000546997 ALG6Q9Y672 507 aa17.29■□□□□ 0.36
BRF1-208ENST00000546997 PTPRSQ13332 1948 aa17.29■□□□□ 0.36
BRF1-208ENST00000546997 ANKRD33BA6NCL7 494 aa17.29■□□□□ 0.36
BRF1-208ENST00000546997 SMNDC1O75940 238 aaKnown RBP eCLIP17.29■□□□□ 0.36
BRF1-208ENST00000546997 P4HA1P13674 534 aa17.29■□□□□ 0.36
BRF1-208ENST00000546997 TAF6P49848 677 aa17.29■□□□□ 0.36
BRF1-208ENST00000546997 SARNPP82979 210 aaKnown RBP17.29■□□□□ 0.36
BRF1-208ENST00000546997 ORC1Q13415 861 aa17.29■□□□□ 0.36
BRF1-208ENST00000546997 ACAD10Q6JQN1 1059 aa17.29■□□□□ 0.36
BRF1-208ENST00000546997 C11orf63Q6NUN7 778 aa17.29■□□□□ 0.36
BRF1-208ENST00000546997 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.29■□□□□ 0.36
BRF1-208ENST00000546997 TWNKQ96RR1 684 aa17.29■□□□□ 0.36
BRF1-208ENST00000546997 ADAM7Q9H2U9 754 aa17.29■□□□□ 0.36
BRF1-208ENST00000546997 ELAC1Q9H777 363 aaKnown RBP17.29■□□□□ 0.36
BRF1-208ENST00000546997 ZDHHC18Q9NUE0 388 aa17.29■□□□□ 0.36
BRF1-208ENST00000546997 INTS9Q9NV88 658 aaKnown RBP17.29■□□□□ 0.36
BRF1-208ENST00000546997 PCDHB7Q9Y5E2 793 aa17.29■□□□□ 0.36
BRF1-208ENST00000546997 TSC2P49815 1807 aa17.29■□□□□ 0.36
BRF1-208ENST00000546997 CEP290O15078 2479 aa17.29■□□□□ 0.36
BRF1-208ENST00000546997 KPNA7A9QM74 516 aa17.28■□□□□ 0.36
BRF1-208ENST00000546997 PODXLO00592 558 aa17.28■□□□□ 0.36
BRF1-208ENST00000546997 ATP2C2O75185 946 aa17.28■□□□□ 0.36
BRF1-208ENST00000546997 CYP1A2P05177 515 aa17.28■□□□□ 0.36
BRF1-208ENST00000546997 RFC2P35250 354 aa17.28■□□□□ 0.36
BRF1-208ENST00000546997 SKIV2L2P42285 1042 aaKnown RBP17.28■□□□□ 0.36
BRF1-208ENST00000546997 PMS2P54278 862 aa17.28■□□□□ 0.36
BRF1-208ENST00000546997 UPP1Q16831 310 aa17.28■□□□□ 0.36
BRF1-208ENST00000546997 CLEC16AQ2KHT3 1053 aa17.28■□□□□ 0.36
BRF1-208ENST00000546997 CMPK2Q5EBM0 449 aa17.28■□□□□ 0.36
BRF1-208ENST00000546997 DENND2CQ68D51 928 aa17.28■□□□□ 0.36
BRF1-208ENST00000546997 NAIF1Q69YI7 327 aaPredicted RBP17.28■□□□□ 0.36
BRF1-208ENST00000546997 CNKSR3Q6P9H4 555 aa17.28■□□□□ 0.36
BRF1-208ENST00000546997 TAOK1Q7L7X3 1001 aa17.28■□□□□ 0.36
BRF1-208ENST00000546997 ZNF280BQ86YH2 543 aa17.28■□□□□ 0.36
BRF1-208ENST00000546997 TBC1D31Q96DN5 1066 aa17.28■□□□□ 0.36
BRF1-208ENST00000546997 ERP44Q9BS26 406 aa17.28■□□□□ 0.36
BRF1-208ENST00000546997 AP1M1Q9BXS5 423 aa17.28■□□□□ 0.36
BRF1-208ENST00000546997 TBC1D13Q9NVG8 400 aa17.28■□□□□ 0.36
BRF1-208ENST00000546997 KLHL33A6NCF5 533 aa17.28■□□□□ 0.36
BRF1-208ENST00000546997 TTI1O43156 1089 aa17.28■□□□□ 0.36
BRF1-208ENST00000546997 SNX3O60493 162 aa17.28■□□□□ 0.36
BRF1-208ENST00000546997 CILPO75339 1184 aa17.28■□□□□ 0.36
BRF1-208ENST00000546997 BRD2P25440 801 aaKnown RBP17.28■□□□□ 0.36
BRF1-208ENST00000546997 GCKP35557 465 aa17.28■□□□□ 0.36
BRF1-208ENST00000546997 PNPLA4P41247 253 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms