RNA–Protein interactions for RNA: ENST00000546947.5

CCDC38-205, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 4

Gene CCDC38, Length 559 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-205ENST00000546947 YWHAQP27348 245 aa15.66■□□□□ 0.1
CCDC38-205ENST00000546947 RPS9P46781 194 aaKnown RBP15.66■□□□□ 0.1
CCDC38-205ENST00000546947 FMO5P49326 533 aa15.66■□□□□ 0.1
CCDC38-205ENST00000546947 KPNA1P52294 538 aaPredicted RBP15.66■□□□□ 0.1
CCDC38-205ENST00000546947 SLC5A3P53794 718 aa15.66■□□□□ 0.1
CCDC38-205ENST00000546947 MARSP56192 900 aaKnown RBP15.66■□□□□ 0.1
CCDC38-205ENST00000546947 STX17P56962 302 aa15.66■□□□□ 0.1
CCDC38-205ENST00000546947 TAF10Q12962 218 aa15.66■□□□□ 0.1
CCDC38-205ENST00000546947 USP4Q13107 963 aa15.66■□□□□ 0.1
CCDC38-205ENST00000546947 ANGPT1Q15389 498 aa15.66■□□□□ 0.1
CCDC38-205ENST00000546947 ARL14EPQ8N8R7 260 aaPredicted RBP15.66■□□□□ 0.1
CCDC38-205ENST00000546947 C12orf29Q8N999 325 aa15.66■□□□□ 0.1
CCDC38-205ENST00000546947 WHAMMQ8TF30 809 aa15.66■□□□□ 0.1
CCDC38-205ENST00000546947 ATOH1Q92858 354 aaPredicted RBP15.66■□□□□ 0.1
CCDC38-205ENST00000546947 TATDN2Q93075 761 aa15.66■□□□□ 0.1
CCDC38-205ENST00000546947 CLDN23Q96B33 292 aa15.66■□□□□ 0.1
CCDC38-205ENST00000546947 CYFIP2Q96F07 1278 aa15.66■□□□□ 0.1
CCDC38-205ENST00000546947 ZFYVE19Q96K21 471 aa15.66■□□□□ 0.1
CCDC38-205ENST00000546947 SLC22A12Q96S37 553 aa15.66■□□□□ 0.1
CCDC38-205ENST00000546947 CYP2S1Q96SQ9 504 aa15.66■□□□□ 0.1
CCDC38-205ENST00000546947 SMOQ99835 787 aa15.66■□□□□ 0.1
CCDC38-205ENST00000546947 CISHQ9NSE2 258 aa15.66■□□□□ 0.1
CCDC38-205ENST00000546947 FAM49BQ9NUQ9 324 aa15.66■□□□□ 0.1
CCDC38-205ENST00000546947 IL37Q9NZH6 218 aa15.66■□□□□ 0.1
CCDC38-205ENST00000546947 P4HA2O15460 535 aa15.65■□□□□ 0.1
CCDC38-205ENST00000546947 FAM200BP0CF97 657 aa15.65■□□□□ 0.1
CCDC38-205ENST00000546947 MAP3K7CLP57077 242 aa15.65■□□□□ 0.1
CCDC38-205ENST00000546947 CETN1Q12798 172 aa15.65■□□□□ 0.1
CCDC38-205ENST00000546947 IFRD2Q12894 506 aaPredicted RBP15.65■□□□□ 0.1
CCDC38-205ENST00000546947 MTF1Q14872 753 aa15.65■□□□□ 0.1
CCDC38-205ENST00000546947 ZNF77Q15935 545 aa15.65■□□□□ 0.1
CCDC38-205ENST00000546947 ITPRIPL2Q3MIP1 535 aa15.65■□□□□ 0.1
CCDC38-205ENST00000546947 CC2D1AQ6P1N0 951 aaPredicted RBP15.65■□□□□ 0.1
CCDC38-205ENST00000546947 RALGPS2Q86X27 583 aaPredicted RBP15.65■□□□□ 0.1
CCDC38-205ENST00000546947 C1orf210Q8IVY1 113 aa15.65■□□□□ 0.1
CCDC38-205ENST00000546947 ZMIZ2Q8NF64 920 aa15.65■□□□□ 0.1
CCDC38-205ENST00000546947 FBXO32Q969P5 355 aa15.65■□□□□ 0.1
CCDC38-205ENST00000546947 FAM83CQ9BQN1 747 aa15.65■□□□□ 0.1
CCDC38-205ENST00000546947 CLSTN2Q9H4D0 955 aa15.65■□□□□ 0.1
CCDC38-205ENST00000546947 FBXO44Q9H4M3 255 aa15.65■□□□□ 0.1
CCDC38-205ENST00000546947 GKN1Q9NS71 199 aa15.65■□□□□ 0.1
CCDC38-205ENST00000546947 GTSE1Q9NYZ3 720 aa15.65■□□□□ 0.1
CCDC38-205ENST00000546947 RWDD2AQ9UIY3 292 aa15.65■□□□□ 0.1
CCDC38-205ENST00000546947 ARHGAP26Q9UNA1 814 aa15.65■□□□□ 0.1
CCDC38-205ENST00000546947 MUC6Q6W4X9 2439 aa15.65■□□□□ 0.1
CCDC38-205ENST00000546947 FAM92AA1XBS5 289 aa15.64■□□□□ 0.09
CCDC38-205ENST00000546947 SPECC1L-ADORA2AF8WAN1 911 aa15.64■□□□□ 0.09
CCDC38-205ENST00000546947 BEST1O76090 585 aa15.64■□□□□ 0.09
CCDC38-205ENST00000546947 OLFM2O95897 454 aa15.64■□□□□ 0.09
CCDC38-205ENST00000546947 ABL1P00519 1130 aa15.64■□□□□ 0.09
CCDC38-205ENST00000546947 OAS1P00973 400 aaKnown RBP15.64■□□□□ 0.09
CCDC38-205ENST00000546947 CCDC192P0DO97 292 aa15.64■□□□□ 0.09
CCDC38-205ENST00000546947 TBXAS1P24557 533 aaPredicted RBP15.64■□□□□ 0.09
CCDC38-205ENST00000546947 ADORA2BP29275 332 aa15.64■□□□□ 0.09
CCDC38-205ENST00000546947 CTHP32929 405 aa15.64■□□□□ 0.09
CCDC38-205ENST00000546947 YWHAEP62258 255 aaKnown RBP15.64■□□□□ 0.09
CCDC38-205ENST00000546947 SLC7A9P82251 487 aa15.64■□□□□ 0.09
CCDC38-205ENST00000546947 FZD5Q13467 585 aa15.64■□□□□ 0.09
CCDC38-205ENST00000546947 RUNX3Q13761 415 aa15.64■□□□□ 0.09
CCDC38-205ENST00000546947 PDGFRLQ15198 375 aa15.64■□□□□ 0.09
CCDC38-205ENST00000546947 ZNF394Q53GI3 561 aa15.64■□□□□ 0.09
CCDC38-205ENST00000546947 PPP1R26Q5T8A7 1209 aaPredicted RBP15.64■□□□□ 0.09
CCDC38-205ENST00000546947 SNX30Q5VWJ9 437 aa15.64■□□□□ 0.09
CCDC38-205ENST00000546947 CLEC20AQ6ZU45 233 aa15.64■□□□□ 0.09
CCDC38-205ENST00000546947 ZNF687Q8N1G0 1237 aa15.64■□□□□ 0.09
CCDC38-205ENST00000546947 MLKLQ8NB16 471 aa15.64■□□□□ 0.09
CCDC38-205ENST00000546947 SCAMP5Q8TAC9 235 aa15.64■□□□□ 0.09
CCDC38-205ENST00000546947 RIN3Q8TB24 985 aa15.64■□□□□ 0.09
CCDC38-205ENST00000546947 TMEM176AQ96HP8 235 aa15.64■□□□□ 0.09
CCDC38-205ENST00000546947 IER2Q9BTL4 223 aa15.64■□□□□ 0.09
CCDC38-205ENST00000546947 SRRTQ9BXP5 876 aaKnown RBP15.64■□□□□ 0.09
CCDC38-205ENST00000546947 PNPLA8Q9NP80 782 aa15.64■□□□□ 0.09
CCDC38-205ENST00000546947 NDRG2Q9UN36 371 aaKnown RBP15.64■□□□□ 0.09
CCDC38-205ENST00000546947 TNK2Q07912 1038 aa15.63■□□□□ 0.09
CCDC38-205ENST00000546947 CUL2Q13617 745 aa15.63■□□□□ 0.09
CCDC38-205ENST00000546947 TRIM59Q8IWR1 403 aa15.63■□□□□ 0.09
CCDC38-205ENST00000546947 KIAA1958Q8N8K9 716 aa15.63■□□□□ 0.09
CCDC38-205ENST00000546947 SLC4A11Q8NBS3 891 aa15.63■□□□□ 0.09
CCDC38-205ENST00000546947 SH3RF2Q8TEC5 729 aa15.63■□□□□ 0.09
CCDC38-205ENST00000546947 OSCP1Q8WVF1 389 aa15.63■□□□□ 0.09
CCDC38-205ENST00000546947 HEXIM2Q96MH2 286 aaKnown RBP15.63■□□□□ 0.09
CCDC38-205ENST00000546947 GBP4Q96PP9 640 aa15.63■□□□□ 0.09
CCDC38-205ENST00000546947 ARID3AQ99856 593 aa15.63■□□□□ 0.09
CCDC38-205ENST00000546947 HPS4Q9NQG7 708 aa15.63■□□□□ 0.09
CCDC38-205ENST00000546947 FAM86C1Q9NVL1 165 aa15.63■□□□□ 0.09
CCDC38-205ENST00000546947 HHLA1C9JL84 531 aa15.62■□□□□ 0.09
CCDC38-205ENST00000546947 ZDHHC11BP0C7U3 371 aa15.62■□□□□ 0.09
CCDC38-205ENST00000546947 SOX9P48436 509 aa15.62■□□□□ 0.09
CCDC38-205ENST00000546947 IFNAR2P48551 515 aa15.62■□□□□ 0.09
CCDC38-205ENST00000546947 TUBP50607 506 aa15.62■□□□□ 0.09
CCDC38-205ENST00000546947 RAD23BP54727 409 aa15.62■□□□□ 0.09
CCDC38-205ENST00000546947 AMPD2Q01433 879 aa15.62■□□□□ 0.09
CCDC38-205ENST00000546947 KCNH2Q12809 1159 aa15.62■□□□□ 0.09
CCDC38-205ENST00000546947 TRIM68Q6AZZ1 485 aa15.62■□□□□ 0.09
CCDC38-205ENST00000546947 DDX42Q86XP3 938 aaKnown RBP eCLIP15.62■□□□□ 0.09
CCDC38-205ENST00000546947 TTC8Q8TAM2 541 aa15.62■□□□□ 0.09
CCDC38-205ENST00000546947 NT5C1BQ96P26 610 aa15.62■□□□□ 0.09
CCDC38-205ENST00000546947 DUSP16Q9BY84 665 aa15.62■□□□□ 0.09
CCDC38-205ENST00000546947 RNF38Q9H0F5 515 aa15.62■□□□□ 0.09
CCDC38-205ENST00000546947 NUP62CLQ9H1M0 184 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms