RNA–Protein interactions for RNA: ENST00000546810.1

RAB5B-203, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5B, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-203ENST00000546810 DEPDC1BQ8WUY9 529 aa14.26□□□□□ -0.13
RAB5B-203ENST00000546810 TCEAL4Q96EI5 215 aa14.26□□□□□ -0.13
RAB5B-203ENST00000546810 MSANTD3Q96H12 275 aa14.26□□□□□ -0.13
RAB5B-203ENST00000546810 ACBD6Q9BR61 282 aa14.26□□□□□ -0.13
RAB5B-203ENST00000546810 CORO1BQ9BR76 489 aa14.26□□□□□ -0.13
RAB5B-203ENST00000546810 PI4K2AQ9BTU6 479 aa14.26□□□□□ -0.13
RAB5B-203ENST00000546810 ADAM33Q9BZ11 813 aa14.26□□□□□ -0.13
RAB5B-203ENST00000546810 TSPY26PQ9H489 355 aa14.26□□□□□ -0.13
RAB5B-203ENST00000546810 CYP3A43Q9HB55 503 aa14.26□□□□□ -0.13
RAB5B-203ENST00000546810 C2orf42Q9NWW7 574 aa14.26□□□□□ -0.13
RAB5B-203ENST00000546810 DDX43Q9NXZ2 648 aaKnown RBP14.26□□□□□ -0.13
RAB5B-203ENST00000546810 MAFFQ9ULX9 164 aa14.26□□□□□ -0.13
RAB5B-203ENST00000546810 LHX6Q9UPM6 363 aa14.26□□□□□ -0.13
RAB5B-203ENST00000546810 COL4A2P08572 1712 aa14.26□□□□□ -0.13
RAB5B-203ENST00000546810 PDCD11Q14690 1871 aaKnown RBP14.25□□□□□ -0.13
RAB5B-203ENST00000546810 WDR27A2RRH5 827 aa14.25□□□□□ -0.13
RAB5B-203ENST00000546810 GOLGA6L19H0YKK7 550 aa14.25□□□□□ -0.13
RAB5B-203ENST00000546810 ZNF197O14709 1029 aa14.25□□□□□ -0.13
RAB5B-203ENST00000546810 GABRDO14764 452 aa14.25□□□□□ -0.13
RAB5B-203ENST00000546810 MICAL2O94851 1124 aa14.25□□□□□ -0.13
RAB5B-203ENST00000546810 HOXC13P31276 330 aa14.25□□□□□ -0.13
RAB5B-203ENST00000546810 GNL1P36915 607 aaPredicted RBP14.25□□□□□ -0.13
RAB5B-203ENST00000546810 RAP1GAPP47736 663 aa14.25□□□□□ -0.13
RAB5B-203ENST00000546810 MLLT6P55198 1093 aaPredicted RBP14.25□□□□□ -0.13
RAB5B-203ENST00000546810 YWHAEP62258 255 aaKnown RBP14.25□□□□□ -0.13
RAB5B-203ENST00000546810 ROR1Q01973 937 aa14.25□□□□□ -0.13
RAB5B-203ENST00000546810 PLA2G2CQ5R387 149 aa14.25□□□□□ -0.13
RAB5B-203ENST00000546810 C1orf228Q6PIY5 440 aa14.25□□□□□ -0.13
RAB5B-203ENST00000546810 SCARA5Q6ZMJ2 495 aa14.25□□□□□ -0.13
RAB5B-203ENST00000546810 GBP6Q6ZN66 633 aa14.25□□□□□ -0.13
RAB5B-203ENST00000546810 LIMS2Q7Z4I7 341 aa14.25□□□□□ -0.13
RAB5B-203ENST00000546810 EHBP1Q8NDI1 1231 aa14.25□□□□□ -0.13
RAB5B-203ENST00000546810 ZNF461Q8TAF7 563 aa14.25□□□□□ -0.13
RAB5B-203ENST00000546810 SEMA4DQ92854 862 aa14.25□□□□□ -0.13
RAB5B-203ENST00000546810 SMARCD2Q92925 531 aa14.25□□□□□ -0.13
RAB5B-203ENST00000546810 NT5C1BQ96P26 610 aa14.25□□□□□ -0.13
RAB5B-203ENST00000546810 ANP32EQ9BTT0 268 aa14.25□□□□□ -0.13
RAB5B-203ENST00000546810 NDST4Q9H3R1 872 aa14.25□□□□□ -0.13
RAB5B-203ENST00000546810 SMOC1Q9H4F8 434 aa14.25□□□□□ -0.13
RAB5B-203ENST00000546810 FAM124BQ9H5Z6 455 aaPredicted RBP14.25□□□□□ -0.13
RAB5B-203ENST00000546810 WASF3Q9UPY6 502 aa14.25□□□□□ -0.13
RAB5B-203ENST00000546810 GREB1Q4ZG55 1949 aa14.25□□□□□ -0.13
RAB5B-203ENST00000546810 GTPBP10A4D1E9 387 aaKnown RBP14.24□□□□□ -0.13
RAB5B-203ENST00000546810 GIPC1O14908 333 aa14.24□□□□□ -0.13
RAB5B-203ENST00000546810 RPP40O75818 363 aaKnown RBP14.24□□□□□ -0.13
RAB5B-203ENST00000546810 TBXAS1P24557 533 aaPredicted RBP14.24□□□□□ -0.13
RAB5B-203ENST00000546810 VIPR2P41587 438 aa14.24□□□□□ -0.13
RAB5B-203ENST00000546810 ZNF252P-AS1Q0IIN9 211 aa14.24□□□□□ -0.13
RAB5B-203ENST00000546810 GPR17Q13304 367 aa14.24□□□□□ -0.13
RAB5B-203ENST00000546810 NCAPHQ15003 741 aa14.24□□□□□ -0.13
RAB5B-203ENST00000546810 MAPRE1Q15691 268 aaKnown RBP14.24□□□□□ -0.13
RAB5B-203ENST00000546810 DGKKQ5KSL6 1271 aa14.24□□□□□ -0.13
RAB5B-203ENST00000546810 FKBP15Q5T1M5 1219 aa14.24□□□□□ -0.13
RAB5B-203ENST00000546810 SPOPLQ6IQ16 392 aa14.24□□□□□ -0.13
RAB5B-203ENST00000546810 PDZD4Q76G19 769 aaPredicted RBP14.24□□□□□ -0.13
RAB5B-203ENST00000546810 KBTBD6Q86V97 674 aa14.24□□□□□ -0.13
RAB5B-203ENST00000546810 DHX40Q8IX18 779 aaKnown RBP14.24□□□□□ -0.13
RAB5B-203ENST00000546810 FAM200AQ8TCP9 573 aa14.24□□□□□ -0.13
RAB5B-203ENST00000546810 CSGALNACT1Q8TDX6 532 aa14.24□□□□□ -0.13
RAB5B-203ENST00000546810 C2orf15Q8WU43 125 aaKnown RBP14.24□□□□□ -0.13
RAB5B-203ENST00000546810 GAB3Q8WWW8 586 aa14.24□□□□□ -0.13
RAB5B-203ENST00000546810 FAM81BQ96LP2 452 aa14.24□□□□□ -0.13
RAB5B-203ENST00000546810 ZSWIM3Q96MP5 696 aa14.24□□□□□ -0.13
RAB5B-203ENST00000546810 MRPL45Q9BRJ2 306 aaKnown RBP14.24□□□□□ -0.13
RAB5B-203ENST00000546810 ZCWPW1Q9H0M4 648 aa14.24□□□□□ -0.13
RAB5B-203ENST00000546810 SMYD3Q9H7B4 428 aa14.24□□□□□ -0.13
RAB5B-203ENST00000546810 APOBEC3GQ9HC16 384 aaKnown RBP14.24□□□□□ -0.13
RAB5B-203ENST00000546810 CBX8Q9HC52 389 aa14.24□□□□□ -0.13
RAB5B-203ENST00000546810 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.24□□□□□ -0.13
RAB5B-203ENST00000546810 GCNT4Q9P109 453 aa14.24□□□□□ -0.13
RAB5B-203ENST00000546810 AFF4Q9UHB7 1163 aaKnown RBP14.24□□□□□ -0.13
RAB5B-203ENST00000546810 CDH9Q9ULB4 789 aa14.24□□□□□ -0.13
RAB5B-203ENST00000546810 PCDHGA5Q9Y5G8 931 aa14.24□□□□□ -0.13
RAB5B-203ENST00000546810 ANK1P16157 1881 aa14.24□□□□□ -0.13
RAB5B-203ENST00000546810 IGF2RP11717 2491 aa14.24□□□□□ -0.13
RAB5B-203ENST00000546810 A8MXQ7 604 aa14.23□□□□□ -0.13
RAB5B-203ENST00000546810 ARNTLO00327 626 aa14.23□□□□□ -0.13
RAB5B-203ENST00000546810 PRRG1O14668 218 aa14.23□□□□□ -0.13
RAB5B-203ENST00000546810 ABLIM3O94929 683 aa14.23□□□□□ -0.13
RAB5B-203ENST00000546810 ATF2P15336 505 aa14.23□□□□□ -0.13
RAB5B-203ENST00000546810 ZNF18P17022 549 aa14.23□□□□□ -0.13
RAB5B-203ENST00000546810 MPLP40238 635 aa14.23□□□□□ -0.13
RAB5B-203ENST00000546810 CCR2P41597 374 aa14.23□□□□□ -0.13
RAB5B-203ENST00000546810 ASPAP45381 313 aa14.23□□□□□ -0.13
RAB5B-203ENST00000546810 KPNA1P52294 538 aaPredicted RBP14.23□□□□□ -0.13
RAB5B-203ENST00000546810 CDH8P55286 799 aa14.23□□□□□ -0.13
RAB5B-203ENST00000546810 IQCB1Q15051 598 aa14.23□□□□□ -0.13
RAB5B-203ENST00000546810 KRT31Q15323 416 aa14.23□□□□□ -0.13
RAB5B-203ENST00000546810 NFE2Q16621 373 aaPredicted RBP14.23□□□□□ -0.13
RAB5B-203ENST00000546810 EXOC3L4Q17RC7 722 aa14.23□□□□□ -0.13
RAB5B-203ENST00000546810 INTS6LQ5JSJ4 861 aaKnown RBP14.23□□□□□ -0.13
RAB5B-203ENST00000546810 CYP4A22Q5TCH4 519 aa14.23□□□□□ -0.13
RAB5B-203ENST00000546810 UNC93AQ86WB7 457 aa14.23□□□□□ -0.13
RAB5B-203ENST00000546810 OSTM1Q86WC4 334 aa14.23□□□□□ -0.13
RAB5B-203ENST00000546810 MFSD6LQ8IWD5 586 aa14.23□□□□□ -0.13
RAB5B-203ENST00000546810 OR10T2Q8NGX3 314 aa14.23□□□□□ -0.13
RAB5B-203ENST00000546810 KBTBD7Q8WVZ9 684 aa14.23□□□□□ -0.13
RAB5B-203ENST00000546810 ZCCHC14Q8WYQ9 949 aaKnown RBP14.23□□□□□ -0.13
RAB5B-203ENST00000546810 GATA6Q92908 595 aa14.23□□□□□ -0.13
RAB5B-203ENST00000546810 TNIP3Q96KP6 325 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms