RNA–Protein interactions for RNA: ENST00000546561.2

TSPAN8-203, Transcript of tetraspanin 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN8, Length 1,168 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN8-203ENST00000546561 SALL4Q9UJQ4 1053 aa8.23□□□□□ -1.09
TSPAN8-203ENST00000546561 CDC23Q9UJX2 597 aa8.23□□□□□ -1.09
TSPAN8-203ENST00000546561 SNX12Q9UMY4 172 aa8.23□□□□□ -1.09
TSPAN8-203ENST00000546561 PRG3Q9Y2Y8 225 aaPredicted RBP8.23□□□□□ -1.09
TSPAN8-203ENST00000546561 CCDC66A2RUB6 948 aa8.22□□□□□ -1.09
TSPAN8-203ENST00000546561 OR6C75A6NL08 312 aa8.22□□□□□ -1.09
TSPAN8-203ENST00000546561 TMEM110-MUSTN1A8MSY1 372 aa8.22□□□□□ -1.09
TSPAN8-203ENST00000546561 ZBBXA8MT70 800 aa8.22□□□□□ -1.09
TSPAN8-203ENST00000546561 CES2O00748 559 aa8.22□□□□□ -1.09
TSPAN8-203ENST00000546561 ENC1O14682 589 aa8.22□□□□□ -1.09
TSPAN8-203ENST00000546561 XPO1O14980 1071 aaKnown RBP8.22□□□□□ -1.09
TSPAN8-203ENST00000546561 BUB1BO60566 1050 aaPredicted RBP8.22□□□□□ -1.09
TSPAN8-203ENST00000546561 DGKIO75912 1065 aa8.22□□□□□ -1.09
TSPAN8-203ENST00000546561 FTCDO95954 541 aa8.22□□□□□ -1.09
TSPAN8-203ENST00000546561 FGBP02675 491 aa8.22□□□□□ -1.09
TSPAN8-203ENST00000546561 ATP1A1P05023 1023 aaKnown RBP8.22□□□□□ -1.09
TSPAN8-203ENST00000546561 VSIG8P0DPA2 414 aa8.22□□□□□ -1.09
TSPAN8-203ENST00000546561 NPR3P17342 541 aa8.22□□□□□ -1.09
TSPAN8-203ENST00000546561 LAG3P18627 525 aa8.22□□□□□ -1.09
TSPAN8-203ENST00000546561 ACAT1P24752 427 aaKnown RBP8.22□□□□□ -1.09
TSPAN8-203ENST00000546561 LMO2P25791 158 aa8.22□□□□□ -1.09
TSPAN8-203ENST00000546561 MAN1A1P33908 653 aa8.22□□□□□ -1.09
TSPAN8-203ENST00000546561 SCNN1AP37088 669 aa8.22□□□□□ -1.09
TSPAN8-203ENST00000546561 PAFAH1B1P43034 410 aa8.22□□□□□ -1.09
TSPAN8-203ENST00000546561 PLA2G4AP47712 749 aa8.22□□□□□ -1.09
TSPAN8-203ENST00000546561 GABRB2P47870 512 aa8.22□□□□□ -1.09
TSPAN8-203ENST00000546561 SLC11A1P49279 550 aa8.22□□□□□ -1.09
TSPAN8-203ENST00000546561 TUBB4BP68371 445 aa8.22□□□□□ -1.09
TSPAN8-203ENST00000546561 PTP4A2Q12974 167 aa8.22□□□□□ -1.09
TSPAN8-203ENST00000546561 MESDQ14696 234 aa8.22□□□□□ -1.09
TSPAN8-203ENST00000546561 NFE2Q16621 373 aaPredicted RBP8.22□□□□□ -1.09
TSPAN8-203ENST00000546561 TCTN1Q2MV58 587 aa8.22□□□□□ -1.09
TSPAN8-203ENST00000546561 PTPN20Q4JDL3 420 aa8.22□□□□□ -1.09
TSPAN8-203ENST00000546561 FAM102AQ5T9C2 384 aaPredicted RBP8.22□□□□□ -1.09
TSPAN8-203ENST00000546561 FUT10Q6P4F1 479 aa8.22□□□□□ -1.09
TSPAN8-203ENST00000546561 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.22□□□□□ -1.09
TSPAN8-203ENST00000546561 FAM35AQ86V20 835 aa8.22□□□□□ -1.09
TSPAN8-203ENST00000546561 TTC30AQ86WT1 665 aa8.22□□□□□ -1.09
TSPAN8-203ENST00000546561 DNAAF5Q86Y56 855 aa8.22□□□□□ -1.09
TSPAN8-203ENST00000546561 C7orf61Q8IZ16 206 aa8.22□□□□□ -1.09
TSPAN8-203ENST00000546561 LRRC57Q8N9N7 239 aa8.22□□□□□ -1.09
TSPAN8-203ENST00000546561 UBA3Q8TBC4 463 aa8.22□□□□□ -1.09
TSPAN8-203ENST00000546561 FEZF2Q8TBJ5 459 aa8.22□□□□□ -1.09
TSPAN8-203ENST00000546561 MYCBPAPQ8TBZ2 947 aa8.22□□□□□ -1.09
TSPAN8-203ENST00000546561 RABGGTAQ92696 567 aa8.22□□□□□ -1.09
TSPAN8-203ENST00000546561 PBKQ96KB5 322 aa8.22□□□□□ -1.09
TSPAN8-203ENST00000546561 RPGRIP1Q96KN7 1286 aa8.22□□□□□ -1.09
TSPAN8-203ENST00000546561 CPXM1Q96SM3 734 aa8.22□□□□□ -1.09
TSPAN8-203ENST00000546561 YME1L1Q96TA2 773 aa8.22□□□□□ -1.09
TSPAN8-203ENST00000546561 NCAPGQ9BPX3 1015 aa8.22□□□□□ -1.09
TSPAN8-203ENST00000546561 DUSP16Q9BY84 665 aa8.22□□□□□ -1.09
TSPAN8-203ENST00000546561 KRTAP9-2Q9BYQ4 174 aa8.22□□□□□ -1.09
TSPAN8-203ENST00000546561 L2HGDHQ9H9P8 463 aa8.22□□□□□ -1.09
TSPAN8-203ENST00000546561 KRT82Q9NSB4 513 aa8.22□□□□□ -1.09
TSPAN8-203ENST00000546561 DNAJB4Q9UDY4 337 aa8.22□□□□□ -1.09
TSPAN8-203ENST00000546561 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.22□□□□□ -1.09
TSPAN8-203ENST00000546561 TIMM13Q9Y5L4 95 aaPredicted RBP8.22□□□□□ -1.09
TSPAN8-203ENST00000546561 MRFAP1Q9Y605 127 aa8.22□□□□□ -1.09
TSPAN8-203ENST00000546561 COL4A6Q14031 1691 aa8.21□□□□□ -1.09
TSPAN8-203ENST00000546561 SIGLEC16A6NMB1 481 aa8.21□□□□□ -1.1
TSPAN8-203ENST00000546561 GOLGA8SH3BPF8 625 aa8.21□□□□□ -1.1
TSPAN8-203ENST00000546561 I3L4J1 428 aa8.21□□□□□ -1.1
TSPAN8-203ENST00000546561 SART1O43290 800 aaKnown RBP8.21□□□□□ -1.1
TSPAN8-203ENST00000546561 FBXO21O94952 628 aa8.21□□□□□ -1.1
TSPAN8-203ENST00000546561 OAZ2O95190 189 aa8.21□□□□□ -1.1
TSPAN8-203ENST00000546561 SLU7O95391 586 aaKnown RBP8.21□□□□□ -1.1
TSPAN8-203ENST00000546561 ERBB2P04626 1255 aa8.21□□□□□ -1.1
TSPAN8-203ENST00000546561 ITGB1P05556 798 aa8.21□□□□□ -1.1
TSPAN8-203ENST00000546561 GALTP07902 379 aa8.21□□□□□ -1.1
TSPAN8-203ENST00000546561 KRT3P12035 628 aa8.21□□□□□ -1.1
TSPAN8-203ENST00000546561 TKTP29401 623 aaKnown RBP8.21□□□□□ -1.1
TSPAN8-203ENST00000546561 PPM1AP35813 382 aa8.21□□□□□ -1.1
TSPAN8-203ENST00000546561 GATMP50440 423 aa8.21□□□□□ -1.1
TSPAN8-203ENST00000546561 TERF1P54274 439 aa8.21□□□□□ -1.1
TSPAN8-203ENST00000546561 BCAR1P56945 870 aa8.21□□□□□ -1.1
TSPAN8-203ENST00000546561 AMPD2Q01433 879 aa8.21□□□□□ -1.1
TSPAN8-203ENST00000546561 PDE4CQ08493 712 aa8.21□□□□□ -1.1
TSPAN8-203ENST00000546561 SMARCB1Q12824 385 aa8.21□□□□□ -1.1
TSPAN8-203ENST00000546561 MAMLD1Q13495 774 aa8.21□□□□□ -1.1
TSPAN8-203ENST00000546561 BTG3Q14201 252 aaPredicted RBP8.21□□□□□ -1.1
TSPAN8-203ENST00000546561 PIGHQ14442 188 aaPredicted RBP8.21□□□□□ -1.1
TSPAN8-203ENST00000546561 ODF2Q5BJF6 829 aa8.21□□□□□ -1.1
TSPAN8-203ENST00000546561 CYP4A22Q5TCH4 519 aa8.21□□□□□ -1.1
TSPAN8-203ENST00000546561 FAM171A1Q5VUB5 890 aa8.21□□□□□ -1.1
TSPAN8-203ENST00000546561 OR6B2Q6IFH4 312 aa8.21□□□□□ -1.1
TSPAN8-203ENST00000546561 ANKS3Q6ZW76 656 aa8.21□□□□□ -1.1
TSPAN8-203ENST00000546561 NT5DC3Q86UY8 548 aa8.21□□□□□ -1.1
TSPAN8-203ENST00000546561 XYLT1Q86Y38 959 aa8.21□□□□□ -1.1
TSPAN8-203ENST00000546561 SPATA2LQ8IUW3 424 aaPredicted RBP8.21□□□□□ -1.1
TSPAN8-203ENST00000546561 SIX6OS1Q8N1H7 587 aa8.21□□□□□ -1.1
TSPAN8-203ENST00000546561 WDTC1Q8N5D0 677 aa8.21□□□□□ -1.1
TSPAN8-203ENST00000546561 FNIP1Q8TF40 1166 aa8.21□□□□□ -1.1
TSPAN8-203ENST00000546561 SLC35F5Q8WV83 523 aa8.21□□□□□ -1.1
TSPAN8-203ENST00000546561 MYLPFQ96A32 169 aa8.21□□□□□ -1.1
TSPAN8-203ENST00000546561 MCRS1Q96EZ8 462 aa8.21□□□□□ -1.1
TSPAN8-203ENST00000546561 TMEM169Q96HH4 297 aa8.21□□□□□ -1.1
TSPAN8-203ENST00000546561 PCED1BQ96HM7 432 aa8.21□□□□□ -1.1
TSPAN8-203ENST00000546561 FUBP3Q96I24 572 aaKnown RBP eCLIP8.21□□□□□ -1.1
TSPAN8-203ENST00000546561 ZNF558Q96NG5 402 aa8.21□□□□□ -1.1
TSPAN8-203ENST00000546561 MCEEQ96PE7 176 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms