RNA–Protein interactions for RNA: ENST00000546276.5

NPC1L1-204, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 4,826 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-204ENST00000546276 AGO4Q9HCK5 861 aaKnown RBP12.66□□□□□ -0.38
NPC1L1-204ENST00000546276 EML1O00423 815 aa12.66□□□□□ -0.38
NPC1L1-204ENST00000546276 ZNF263O14978 683 aa12.66□□□□□ -0.38
NPC1L1-204ENST00000546276 QPCTQ16769 361 aa12.66□□□□□ -0.38
NPC1L1-204ENST00000546276 ANO4Q32M45 955 aa12.66□□□□□ -0.38
NPC1L1-204ENST00000546276 SEL1L3Q68CR1 1132 aa12.66□□□□□ -0.38
NPC1L1-204ENST00000546276 SLC30A10Q6XR72 485 aa12.66□□□□□ -0.38
NPC1L1-204ENST00000546276 KATNAL2Q8IYT4 538 aa12.66□□□□□ -0.38
NPC1L1-204ENST00000546276 DEFB107AQ8IZN7 70 aa12.66□□□□□ -0.38
NPC1L1-204ENST00000546276 EMC1Q8N766 993 aa12.66□□□□□ -0.38
NPC1L1-204ENST00000546276 PURBQ96QR8 312 aaKnown RBP12.66□□□□□ -0.38
NPC1L1-204ENST00000546276 ZNF184Q99676 751 aaPredicted RBP12.66□□□□□ -0.38
NPC1L1-204ENST00000546276 MMTAG2Q9BU76 263 aaKnown RBP12.66□□□□□ -0.38
NPC1L1-204ENST00000546276 KCNMB3Q9NPA1 279 aa12.66□□□□□ -0.38
NPC1L1-204ENST00000546276 FAM8A1Q9UBU6 413 aa12.66□□□□□ -0.38
NPC1L1-204ENST00000546276 TNS2Q63HR2 1409 aa12.66□□□□□ -0.38
NPC1L1-204ENST00000546276 ASTN1O14525 1302 aa12.66□□□□□ -0.38
NPC1L1-204ENST00000546276 ADGRA3Q8IWK6 1321 aa12.66□□□□□ -0.38
NPC1L1-204ENST00000546276 CPA3P15088 417 aa12.65□□□□□ -0.38
NPC1L1-204ENST00000546276 RPA3P35244 121 aaPredicted RBP12.65□□□□□ -0.38
NPC1L1-204ENST00000546276 SLC44A4Q53GD3 710 aa12.65□□□□□ -0.38
NPC1L1-204ENST00000546276 GPR141Q7Z602 305 aa12.65□□□□□ -0.38
NPC1L1-204ENST00000546276 ZNF786Q8N393 782 aa12.65□□□□□ -0.38
NPC1L1-204ENST00000546276 WNK4Q96J92 1243 aa12.65□□□□□ -0.38
NPC1L1-204ENST00000546276 BEGAINQ9BUH8 593 aa12.65□□□□□ -0.38
NPC1L1-204ENST00000546276 LRRC19Q9H756 370 aa12.65□□□□□ -0.38
NPC1L1-204ENST00000546276 IL1RL2Q9HB29 575 aa12.65□□□□□ -0.38
NPC1L1-204ENST00000546276 E9PBE3 544 aa12.65□□□□□ -0.38
NPC1L1-204ENST00000546276 KLHL41O60662 606 aa12.65□□□□□ -0.38
NPC1L1-204ENST00000546276 PSMG1O95456 288 aa12.65□□□□□ -0.38
NPC1L1-204ENST00000546276 CDC25CP30307 473 aa12.65□□□□□ -0.38
NPC1L1-204ENST00000546276 ORC1Q13415 861 aa12.65□□□□□ -0.38
NPC1L1-204ENST00000546276 C6orf10Q5SRN2 563 aa12.65□□□□□ -0.38
NPC1L1-204ENST00000546276 EXOC3L1Q86VI1 746 aa12.65□□□□□ -0.38
NPC1L1-204ENST00000546276 IPMKQ8NFU5 416 aa12.65□□□□□ -0.38
NPC1L1-204ENST00000546276 SLC7A14Q8TBB6 771 aa12.65□□□□□ -0.38
NPC1L1-204ENST00000546276 PARD3BQ8TEW8 1205 aa12.65□□□□□ -0.38
NPC1L1-204ENST00000546276 ZNF606Q8WXB4 792 aa12.65□□□□□ -0.38
NPC1L1-204ENST00000546276 SGF29Q96ES7 293 aa12.65□□□□□ -0.38
NPC1L1-204ENST00000546276 TMEM39BQ9GZU3 492 aa12.65□□□□□ -0.38
NPC1L1-204ENST00000546276 GPATCH2LQ9NWQ4 482 aa12.65□□□□□ -0.38
NPC1L1-204ENST00000546276 ARMCX1Q9P291 453 aa12.65□□□□□ -0.38
NPC1L1-204ENST00000546276 LCA5LO95447 670 aa12.65□□□□□ -0.38
NPC1L1-204ENST00000546276 TRPC1P48995 793 aa12.65□□□□□ -0.38
NPC1L1-204ENST00000546276 R3HDM1Q15032 1099 aaKnown RBP12.65□□□□□ -0.38
NPC1L1-204ENST00000546276 WDR49Q8IV35 697 aa12.65□□□□□ -0.38
NPC1L1-204ENST00000546276 MFN1Q8IWA4 741 aa12.65□□□□□ -0.38
NPC1L1-204ENST00000546276 FAM192AQ9GZU8 254 aa12.65□□□□□ -0.38
NPC1L1-204ENST00000546276 KIAA1683Q9H0B3 1180 aa12.65□□□□□ -0.38
NPC1L1-204ENST00000546276 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.65□□□□□ -0.383e-8■■■■□ 20.7
NPC1L1-204ENST00000546276 KIAA1257Q9ULG3 409 aa12.65□□□□□ -0.38
NPC1L1-204ENST00000546276 TMX2Q9Y320 296 aa12.65□□□□□ -0.38
NPC1L1-204ENST00000546276 AP4S1Q9Y587 144 aa12.65□□□□□ -0.38
NPC1L1-204ENST00000546276 KBTBD13C9JR72 458 aa12.65□□□□□ -0.38
NPC1L1-204ENST00000546276 GAS2O43903 313 aaKnown RBP12.65□□□□□ -0.38
NPC1L1-204ENST00000546276 PDE5AO76074 875 aa12.65□□□□□ -0.38
NPC1L1-204ENST00000546276 CD4P01730 458 aa12.65□□□□□ -0.38
NPC1L1-204ENST00000546276 CYP1A2P05177 515 aa12.65□□□□□ -0.38
NPC1L1-204ENST00000546276 ATP5BP06576 529 aaKnown RBP12.65□□□□□ -0.38
NPC1L1-204ENST00000546276 CHRNA5P30532 468 aa12.65□□□□□ -0.38
NPC1L1-204ENST00000546276 MYL6P60660 151 aa12.65□□□□□ -0.38
NPC1L1-204ENST00000546276 LBRQ14739 615 aaKnown RBP12.65□□□□□ -0.38
NPC1L1-204ENST00000546276 FAM83EQ2M2I3 478 aa12.65□□□□□ -0.38
NPC1L1-204ENST00000546276 IYDQ6PHW0 289 aa12.65□□□□□ -0.38
NPC1L1-204ENST00000546276 LINC00523Q86TU6 105 aa12.65□□□□□ -0.38
NPC1L1-204ENST00000546276 FAM172AQ8WUF8 416 aa12.65□□□□□ -0.38
NPC1L1-204ENST00000546276 FAR2Q96K12 515 aa12.65□□□□□ -0.38
NPC1L1-204ENST00000546276 THAP1Q9NVV9 213 aa12.65□□□□□ -0.38
NPC1L1-204ENST00000546276 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.65□□□□□ -0.38
NPC1L1-204ENST00000546276 SEPT3Q9UH03 358 aa12.65□□□□□ -0.38
NPC1L1-204ENST00000546276 LRFN2Q9ULH4 789 aa12.65□□□□□ -0.38
NPC1L1-204ENST00000546276 ZNRF3Q9ULT6 936 aa12.65□□□□□ -0.38
NPC1L1-204ENST00000546276 PIN4Q9Y237 131 aaKnown RBP12.65□□□□□ -0.38
NPC1L1-204ENST00000546276 AGPSO00116 658 aa12.64□□□□□ -0.39
NPC1L1-204ENST00000546276 OASLQ15646 514 aaKnown RBP12.64□□□□□ -0.39
NPC1L1-204ENST00000546276 KIAA1841Q6NSI8 718 aa12.64□□□□□ -0.39
NPC1L1-204ENST00000546276 EFCAB12Q6NXP0 572 aa12.64□□□□□ -0.39
NPC1L1-204ENST00000546276 C1orf186Q6ZWK4 172 aa12.64□□□□□ -0.39
NPC1L1-204ENST00000546276 TAS2R42Q7RTR8 314 aa12.64□□□□□ -0.39
NPC1L1-204ENST00000546276 GDPD5Q8WTR4 605 aa12.64□□□□□ -0.39
NPC1L1-204ENST00000546276 RMDN1Q96DB5 314 aa12.64□□□□□ -0.39
NPC1L1-204ENST00000546276 DACH2Q96NX9 599 aa12.64□□□□□ -0.39
NPC1L1-204ENST00000546276 SPON2Q9BUD6 331 aa12.64□□□□□ -0.39
NPC1L1-204ENST00000546276 TBC1D10AQ9BXI6 508 aa12.64□□□□□ -0.39
NPC1L1-204ENST00000546276 LRRC40Q9H9A6 602 aa12.64□□□□□ -0.39
NPC1L1-204ENST00000546276 DDTLA6NHG4 134 aaPredicted RBP12.64□□□□□ -0.39
NPC1L1-204ENST00000546276 SERPINE1P05121 402 aa12.64□□□□□ -0.39
NPC1L1-204ENST00000546276 ABHD2P08910 425 aa12.64□□□□□ -0.39
NPC1L1-204ENST00000546276 MARCKSL1P49006 195 aa12.64□□□□□ -0.39
NPC1L1-204ENST00000546276 KCNK10P57789 538 aa12.64□□□□□ -0.39
NPC1L1-204ENST00000546276 PPP3CAQ08209 521 aa12.64□□□□□ -0.39
NPC1L1-204ENST00000546276 CDR2LQ86X02 465 aaPredicted RBP12.64□□□□□ -0.39
NPC1L1-204ENST00000546276 SAMD3Q8N6K7 520 aa12.64□□□□□ -0.39
NPC1L1-204ENST00000546276 OR9Q1Q8NGQ5 310 aa12.64□□□□□ -0.39
NPC1L1-204ENST00000546276 SLC10A4Q96EP9 437 aa12.64□□□□□ -0.39
NPC1L1-204ENST00000546276 SIKE1Q9BRV8 207 aa12.64□□□□□ -0.39
NPC1L1-204ENST00000546276 KCTD10Q9H3F6 313 aa12.64□□□□□ -0.39
NPC1L1-204ENST00000546276 RUBCNLQ9H714 662 aa12.64□□□□□ -0.39
NPC1L1-204ENST00000546276 SNX13Q9Y5W8 968 aa12.64□□□□□ -0.39
NPC1L1-204ENST00000546276 SLCO1B7G3V0H7 640 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms