RNA–Protein interactions for RNA: ENST00000546120.2

UBC-213, Transcript of ubiquitin C, human

TSL 5 BASIC

Gene UBC, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBC-213	ENST00000546120	OTUD5	Q96G74	571 aa		10.59	□□□□□ -0.71
UBC-213	ENST00000546120	DCUN1D1	Q96GG9	259 aa		10.59	□□□□□ -0.71
UBC-213	ENST00000546120	ANKRD36BP1	Q96IX9	119 aa		10.59	□□□□□ -0.71
UBC-213	ENST00000546120	RILP	Q96NA2	401 aa		10.59	□□□□□ -0.71
UBC-213	ENST00000546120	ACCS	Q96QU6	501 aa		10.59	□□□□□ -0.71
UBC-213	ENST00000546120	EFHD1	Q9BUP0	239 aa		10.59	□□□□□ -0.71
UBC-213	ENST00000546120	C1orf50	Q9BV19	199 aa		10.59	□□□□□ -0.71
UBC-213	ENST00000546120	STRA6	Q9BX79	667 aa		10.59	□□□□□ -0.71
UBC-213	ENST00000546120	FHDC1	Q9C0D6	1143 aa	Predicted RBP	10.59	□□□□□ -0.71
UBC-213	ENST00000546120	COQ6	Q9Y2Z9	468 aa		10.59	□□□□□ -0.71
UBC-213	ENST00000546120	PLLP	Q9Y342	182 aa		10.59	□□□□□ -0.71
UBC-213	ENST00000546120	ZNF711	Q9Y462	761 aa		10.59	□□□□□ -0.71
UBC-213	ENST00000546120	FARP1	Q9Y4F1	1045 aa	Predicted RBP	10.59	□□□□□ -0.71
UBC-213	ENST00000546120		A0A1B0GUL6	1792 aa		10.59	□□□□□ -0.71
UBC-213	ENST00000546120	GAK	O14976	1311 aa		10.58	□□□□□ -0.71
UBC-213	ENST00000546120	SF3B1	O75533	1304 aa	Known RBP eCLIP	10.58	□□□□□ -0.71
UBC-213	ENST00000546120	MYPN	Q86TC9	1320 aa		10.58	□□□□□ -0.71
UBC-213	ENST00000546120		A0A1W2PPM1	405 aa		10.58	□□□□□ -0.72
UBC-213	ENST00000546120	FBP2	O00757	339 aa		10.58	□□□□□ -0.72
UBC-213	ENST00000546120	MED24	O75448	989 aa		10.58	□□□□□ -0.72
UBC-213	ENST00000546120	RALA	P11233	206 aa		10.58	□□□□□ -0.72
UBC-213	ENST00000546120	ETS2	P15036	469 aa		10.58	□□□□□ -0.72
UBC-213	ENST00000546120	RAG1	P15918	1043 aa		10.58	□□□□□ -0.72
UBC-213	ENST00000546120	SLC5A2	P31639	672 aa		10.58	□□□□□ -0.72
UBC-213	ENST00000546120	GALK1	P51570	392 aa		10.58	□□□□□ -0.72
UBC-213	ENST00000546120	TMPRSS15	P98073	1019 aa		10.58	□□□□□ -0.72
UBC-213	ENST00000546120	FMO1	Q01740	532 aa		10.58	□□□□□ -0.72
UBC-213	ENST00000546120	KCNC4	Q03721	635 aa		10.58	□□□□□ -0.72
UBC-213	ENST00000546120	GPS1	Q13098	491 aa		10.58	□□□□□ -0.72
UBC-213	ENST00000546120	TRIP13	Q15645	432 aa	Predicted RBP	10.58	□□□□□ -0.72
UBC-213	ENST00000546120	INSC	Q1MX18	579 aa		10.58	□□□□□ -0.72
UBC-213	ENST00000546120	CBWD6	Q4V339	395 aa		10.58	□□□□□ -0.72
UBC-213	ENST00000546120	CBWD3	Q5JTY5	395 aa		10.58	□□□□□ -0.72
UBC-213	ENST00000546120	CBWD5	Q5RIA9	395 aa		10.58	□□□□□ -0.72
UBC-213	ENST00000546120	UBAP2	Q5T6F2	1119 aa	Known RBP	10.58	□□□□□ -0.72
UBC-213	ENST00000546120	RC3H1	Q5TC82	1133 aa	Known RBP	10.58	□□□□□ -0.72
UBC-213	ENST00000546120	FAXC	Q5TGI0	409 aa		10.58	□□□□□ -0.72
UBC-213	ENST00000546120	IL23R	Q5VWK5	629 aa		10.58	□□□□□ -0.72
UBC-213	ENST00000546120	NEPRO	Q6NW34	567 aa		10.58	□□□□□ -0.72
UBC-213	ENST00000546120	AADACL2	Q6P093	401 aa		10.58	□□□□□ -0.72
UBC-213	ENST00000546120	GJB7	Q6PEY0	223 aa		10.58	□□□□□ -0.72
UBC-213	ENST00000546120	TPTE2	Q6XPS3	522 aa		10.58	□□□□□ -0.72
UBC-213	ENST00000546120	SH2D5	Q6ZV89	423 aa		10.58	□□□□□ -0.72
UBC-213	ENST00000546120	LPCAT2	Q7L5N7	544 aa		10.58	□□□□□ -0.72
UBC-213	ENST00000546120	GPIHBP1	Q8IV16	184 aa		10.58	□□□□□ -0.72
UBC-213	ENST00000546120	DNAJC10	Q8IXB1	793 aa		10.58	□□□□□ -0.72
UBC-213	ENST00000546120	PIWIL2	Q8TC59	973 aa	Known RBP	10.58	□□□□□ -0.72
UBC-213	ENST00000546120	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	10.58	□□□□□ -0.72
UBC-213	ENST00000546120	GIPC3	Q8TF64	312 aa		10.58	□□□□□ -0.72
UBC-213	ENST00000546120	TRUB1	Q8WWH5	349 aa	Known RBP	10.58	□□□□□ -0.72
UBC-213	ENST00000546120	NLRP7	Q8WX94	980 aa		10.58	□□□□□ -0.72
UBC-213	ENST00000546120	RPGR	Q92834	1020 aa	Known RBP	10.58	□□□□□ -0.72
UBC-213	ENST00000546120	ATP6V0A1	Q93050	837 aa		10.58	□□□□□ -0.72
UBC-213	ENST00000546120	FAM163A	Q96GL9	167 aa	Predicted RBP	10.58	□□□□□ -0.72
UBC-213	ENST00000546120	NT5C1B	Q96P26	610 aa		10.58	□□□□□ -0.72
UBC-213	ENST00000546120	SLC2A11	Q9BYW1	496 aa		10.58	□□□□□ -0.72
UBC-213	ENST00000546120	GCOM2	Q9BZD3	368 aa	Predicted RBP	10.58	□□□□□ -0.72
UBC-213	ENST00000546120	WDR11	Q9BZH6	1224 aa		10.58	□□□□□ -0.72
UBC-213	ENST00000546120	PDZD7	Q9H5P4	517 aa		10.58	□□□□□ -0.72
UBC-213	ENST00000546120	EHMT1	Q9H9B1	1298 aa		10.58	□□□□□ -0.72
UBC-213	ENST00000546120	CLK4	Q9HAZ1	481 aa	Known RBP	10.58	□□□□□ -0.72
UBC-213	ENST00000546120	MOV10	Q9HCE1	1003 aa	Known RBP	10.58	□□□□□ -0.72
UBC-213	ENST00000546120	PARVA	Q9NVD7	372 aa		10.58	□□□□□ -0.72
UBC-213	ENST00000546120	ADAMTS6	Q9UKP5	1117 aa		10.58	□□□□□ -0.72
UBC-213	ENST00000546120	POMP	Q9Y244	141 aa		10.58	□□□□□ -0.72
UBC-213	ENST00000546120	CIC	Q96RK0	1608 aa	Predicted RBP	10.58	□□□□□ -0.72
UBC-213	ENST00000546120	TRIM64B	A6NI03	449 aa		10.57	□□□□□ -0.72
UBC-213	ENST00000546120	FAM155A	B1AL88	458 aa	Predicted RBP	10.57	□□□□□ -0.72
UBC-213	ENST00000546120	MCF2L	O15068	1137 aa		10.57	□□□□□ -0.72
UBC-213	ENST00000546120	SLC22A1	O15245	554 aa		10.57	□□□□□ -0.72
UBC-213	ENST00000546120	EDIL3	O43854	480 aa		10.57	□□□□□ -0.72
UBC-213	ENST00000546120	NOL3	O60936	208 aa	Known RBP	10.57	□□□□□ -0.72
UBC-213	ENST00000546120	CNOT3	O75175	753 aa	Known RBP	10.57	□□□□□ -0.72
UBC-213	ENST00000546120	CRTAM	O95727	393 aa		10.57	□□□□□ -0.72
UBC-213	ENST00000546120	NTRK1	P04629	796 aa		10.57	□□□□□ -0.72
UBC-213	ENST00000546120	LDHB	P07195	334 aa	Known RBP	10.57	□□□□□ -0.72
UBC-213	ENST00000546120	OCM2	P0CE71	109 aa		10.57	□□□□□ -0.72
UBC-213	ENST00000546120	OCM	P0CE72	109 aa	Predicted RBP	10.57	□□□□□ -0.72
UBC-213	ENST00000546120	SPATA31C1	P0DKV0	1188 aa		10.57	□□□□□ -0.72
UBC-213	ENST00000546120	FDX1	P10109	184 aa		10.57	□□□□□ -0.72
UBC-213	ENST00000546120	NSF	P46459	744 aa	Known RBP	10.57	□□□□□ -0.72
UBC-213	ENST00000546120	CDK8	P49336	464 aa		10.57	□□□□□ -0.72
UBC-213	ENST00000546120	MXI1	P50539	228 aa		10.57	□□□□□ -0.72
UBC-213	ENST00000546120	PRKAA2	P54646	552 aa		10.57	□□□□□ -0.72
UBC-213	ENST00000546120	C21orf59	P57076	290 aa		10.57	□□□□□ -0.72
UBC-213	ENST00000546120	ATP6V0D1	P61421	351 aa		10.57	□□□□□ -0.72
UBC-213	ENST00000546120	KDSR	Q06136	332 aa		10.57	□□□□□ -0.72
UBC-213	ENST00000546120	SPIRE1	Q08AE8	756 aa		10.57	□□□□□ -0.72
UBC-213	ENST00000546120	ZNF543	Q08ER8	600 aa		10.57	□□□□□ -0.72
UBC-213	ENST00000546120	PTK7	Q13308	1070 aa		10.57	□□□□□ -0.72
UBC-213	ENST00000546120	CCNI	Q14094	377 aa		10.57	□□□□□ -0.72
UBC-213	ENST00000546120	ADGRE1	Q14246	886 aa		10.57	□□□□□ -0.72
UBC-213	ENST00000546120	RFTN1	Q14699	578 aa	Predicted RBP	10.57	□□□□□ -0.72
UBC-213	ENST00000546120	SPCS2	Q15005	226 aa		10.57	□□□□□ -0.72
UBC-213	ENST00000546120	HERC3	Q15034	1050 aa		10.57	□□□□□ -0.72
UBC-213	ENST00000546120	TLR1	Q15399	786 aa		10.57	□□□□□ -0.72
UBC-213	ENST00000546120	OASL	Q15646	514 aa	Known RBP	10.57	□□□□□ -0.72
UBC-213	ENST00000546120	SLC10A5	Q5PT55	438 aa		10.57	□□□□□ -0.72
UBC-213	ENST00000546120	PLA2G4F	Q68DD2	849 aa		10.57	□□□□□ -0.72
UBC-213	ENST00000546120	RINT1	Q6NUQ1	792 aa		10.57	□□□□□ -0.72

Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms