RNA–Protein interactions for RNA: ENST00000545942.5

CHD4-214, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 1 (best)

Gene CHD4, Length 1,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-214ENST00000545942 HEATR6Q6AI08 1181 aaKnown RBP24.15■■□□□ 1.46
CHD4-214ENST00000545942 FAM35AQ86V20 835 aa24.15■■□□□ 1.46
CHD4-214ENST00000545942 GUF1Q8N442 669 aaKnown RBP24.15■■□□□ 1.46
CHD4-214ENST00000545942 RMDN1Q96DB5 314 aa24.15■■□□□ 1.46
CHD4-214ENST00000545942 CCDC34Q96HJ3 373 aa24.15■■□□□ 1.46
CHD4-214ENST00000545942 GDPD2Q9HCC8 539 aa24.15■■□□□ 1.46
CHD4-214ENST00000545942 FBRSL1Q9HCM7 1045 aaKnown RBP24.15■■□□□ 1.46
CHD4-214ENST00000545942 FRYLO94915 3013 aa24.15■■□□□ 1.46
CHD4-214ENST00000545942 ZNF638Q14966 1978 aaKnown RBP24.15■■□□□ 1.46
CHD4-214ENST00000545942 LEFTY2O00292 366 aa24.14■■□□□ 1.46
CHD4-214ENST00000545942 AKAP3O75969 853 aa24.14■■□□□ 1.46
CHD4-214ENST00000545942 OLFM2O95897 454 aa24.14■■□□□ 1.46
CHD4-214ENST00000545942 ASS1P00966 412 aaKnown RBP24.14■■□□□ 1.46
CHD4-214ENST00000545942 OAS1P00973 400 aaKnown RBP24.14■■□□□ 1.46
CHD4-214ENST00000545942 EGFP01133 1207 aa24.14■■□□□ 1.46
CHD4-214ENST00000545942 PIK3CAP42336 1068 aa24.14■■□□□ 1.46
CHD4-214ENST00000545942 IFRD2Q12894 506 aaPredicted RBP24.14■■□□□ 1.46
CHD4-214ENST00000545942 FBXO43Q4G163 708 aa24.14■■□□□ 1.46
CHD4-214ENST00000545942 C1orf220Q5T0J3 134 aa24.14■■□□□ 1.46
CHD4-214ENST00000545942 LAIR1Q6GTX8 287 aa24.14■■□□□ 1.46
CHD4-214ENST00000545942 PKN3Q6P5Z2 889 aa24.14■■□□□ 1.46
CHD4-214ENST00000545942 PRR23BQ6ZRT6 265 aa24.14■■□□□ 1.46
CHD4-214ENST00000545942 PAQR9Q6ZVX9 377 aa24.14■■□□□ 1.46
CHD4-214ENST00000545942 INTS8Q75QN2 995 aaKnown RBP24.14■■□□□ 1.46
CHD4-214ENST00000545942 ERMP1Q7Z2K6 904 aa24.14■■□□□ 1.46
CHD4-214ENST00000545942 PDZD8Q8NEN9 1154 aa24.14■■□□□ 1.46
CHD4-214ENST00000545942 OVCA2Q8WZ82 227 aa24.14■■□□□ 1.46
CHD4-214ENST00000545942 SMARCD1Q96GM5 515 aa24.14■■□□□ 1.46
CHD4-214ENST00000545942 KCNK16Q96T55 309 aa24.14■■□□□ 1.46
CHD4-214ENST00000545942 RNF38Q9H0F5 515 aa24.14■■□□□ 1.46
CHD4-214ENST00000545942 LINC00597Q9H2U6 94 aa24.14■■□□□ 1.46
CHD4-214ENST00000545942 DMAP1Q9NPF5 467 aaPredicted RBP24.14■■□□□ 1.46
CHD4-214ENST00000545942 GREB1Q4ZG55 1949 aa24.14■■□□□ 1.46
CHD4-214ENST00000545942 DCHS1Q96JQ0 3298 aa24.14■■□□□ 1.46
CHD4-214ENST00000545942 HRO43593 1189 aa24.13■■□□□ 1.45
CHD4-214ENST00000545942 RNF40O75150 1001 aa24.13■■□□□ 1.45
CHD4-214ENST00000545942 NFATC1O95644 943 aa24.13■■□□□ 1.45
CHD4-214ENST00000545942 HLA-DRAP01903 254 aa24.13■■□□□ 1.45
CHD4-214ENST00000545942 RPL13P26373 211 aaKnown RBP24.13■■□□□ 1.45
CHD4-214ENST00000545942 SIM2Q14190 667 aaPredicted RBP24.13■■□□□ 1.45
CHD4-214ENST00000545942 LPAL2Q16609 132 aa24.13■■□□□ 1.45
CHD4-214ENST00000545942 NAIF1Q69YI7 327 aaPredicted RBP24.13■■□□□ 1.45
CHD4-214ENST00000545942 ACOT1Q86TX2 421 aa24.13■■□□□ 1.45
CHD4-214ENST00000545942 UNC93AQ86WB7 457 aa24.13■■□□□ 1.45
CHD4-214ENST00000545942 KIAA1958Q8N8K9 716 aa24.13■■□□□ 1.45
CHD4-214ENST00000545942 CD101Q93033 1021 aa24.13■■□□□ 1.45
CHD4-214ENST00000545942 IMPG2Q9BZV3 1241 aa24.13■■□□□ 1.45
CHD4-214ENST00000545942 CPQQ9Y646 472 aa24.13■■□□□ 1.45
CHD4-214ENST00000545942 SPTBN4Q9H254 2564 aa24.13■■□□□ 1.45
CHD4-214ENST00000545942 KRT13P13646 458 aa24.12■■□□□ 1.45
CHD4-214ENST00000545942 ASPAP45381 313 aa24.12■■□□□ 1.45
CHD4-214ENST00000545942 NDST1P52848 882 aa24.12■■□□□ 1.45
CHD4-214ENST00000545942 ENPEPQ07075 957 aa24.12■■□□□ 1.45
CHD4-214ENST00000545942 SPOPLQ6IQ16 392 aa24.12■■□□□ 1.45
CHD4-214ENST00000545942 WDR5BQ86VZ2 330 aa24.12■■□□□ 1.45
CHD4-214ENST00000545942 FAM186BQ8IYM0 893 aa24.12■■□□□ 1.45
CHD4-214ENST00000545942 FUKQ8N0W3 1084 aa24.12■■□□□ 1.45
CHD4-214ENST00000545942 CRYBG2Q8N1P7 616 aa24.12■■□□□ 1.45
CHD4-214ENST00000545942 FBXO32Q969P5 355 aa24.12■■□□□ 1.45
CHD4-214ENST00000545942 KRT82Q9NSB4 513 aa24.12■■□□□ 1.45
CHD4-214ENST00000545942 SMPD4Q9NXE4 827 aa24.12■■□□□ 1.45
CHD4-214ENST00000545942 SLC8A2Q9UPR5 921 aa24.12■■□□□ 1.45
CHD4-214ENST00000545942 ANAPC1Q9H1A4 1944 aa24.12■■□□□ 1.45
CHD4-214ENST00000545942 WDR87Q6ZQQ6 2873 aa24.12■■□□□ 1.45
CHD4-214ENST00000545942 PSMC2P35998 433 aaKnown RBP24.11■■□□□ 1.45
CHD4-214ENST00000545942 SLC5A3P53794 718 aa24.11■■□□□ 1.45
CHD4-214ENST00000545942 SRSF5Q13243 272 aaKnown RBP24.11■■□□□ 1.45
CHD4-214ENST00000545942 ADAM9Q13443 819 aa24.11■■□□□ 1.45
CHD4-214ENST00000545942 TNFRSF10BO14763 440 aa24.1■■□□□ 1.45
CHD4-214ENST00000545942 AP1G2O75843 785 aa24.1■■□□□ 1.45
CHD4-214ENST00000545942 TRIM49P0CI25 452 aa24.1■■□□□ 1.45
CHD4-214ENST00000545942 TRIM49CP0CI26 452 aa24.1■■□□□ 1.45
CHD4-214ENST00000545942 MBL2P11226 248 aaPredicted RBP24.1■■□□□ 1.45
CHD4-214ENST00000545942 TRIM21P19474 475 aaKnown RBP24.1■■□□□ 1.45
CHD4-214ENST00000545942 HOXC13P31276 330 aa24.1■■□□□ 1.45
CHD4-214ENST00000545942 GCLMP48507 274 aa24.1■■□□□ 1.45
CHD4-214ENST00000545942 DDX42Q86XP3 938 aaKnown RBP eCLIP24.1■■□□□ 1.45
CHD4-214ENST00000545942 SCAMP5Q8TAC9 235 aa24.1■■□□□ 1.45
CHD4-214ENST00000545942 SLC2A14Q8TDB8 520 aa24.1■■□□□ 1.45
CHD4-214ENST00000545942 COMMD8Q9NX08 183 aa24.1■■□□□ 1.45
CHD4-214ENST00000545942 IL37Q9NZH6 218 aa24.1■■□□□ 1.45
CHD4-214ENST00000545942 HMGXB4Q9UGU5 601 aa24.1■■□□□ 1.45
CHD4-214ENST00000545942 CCDC163A0A0D9SF12 145 aa24.1■■□□□ 1.45
CHD4-214ENST00000545942 SLC9A3R1O14745 358 aaPredicted RBP24.1■■□□□ 1.45
CHD4-214ENST00000545942 RETP07949 1114 aa24.1■■□□□ 1.45
CHD4-214ENST00000545942 CCDC130P13994 396 aa24.1■■□□□ 1.45
CHD4-214ENST00000545942 PPP3CAQ08209 521 aa24.1■■□□□ 1.45
CHD4-214ENST00000545942 ORC1Q13415 861 aa24.1■■□□□ 1.45
CHD4-214ENST00000545942 BECN1Q14457 450 aa24.1■■□□□ 1.45
CHD4-214ENST00000545942 PUM1Q14671 1186 aaKnown RBP eCLIP24.1■■□□□ 1.458e-8■■□□□ 11.9
CHD4-214ENST00000545942 ZCWPW2Q504Y3 356 aa24.1■■□□□ 1.45
CHD4-214ENST00000545942 FILIP1Q7Z7B0 1213 aa24.1■■□□□ 1.45
CHD4-214ENST00000545942 TAS1R2Q8TE23 839 aa24.1■■□□□ 1.45
CHD4-214ENST00000545942 SMOQ99835 787 aa24.1■■□□□ 1.45
CHD4-214ENST00000545942 UTP3Q9NQZ2 479 aaKnown RBP eCLIP24.1■■□□□ 1.451e-6■■■■■ 54.3
CHD4-214ENST00000545942 CFAP97Q9P2B7 532 aa24.1■■□□□ 1.45
CHD4-214ENST00000545942 CHORDC1Q9UHD1 332 aaPredicted RBP24.1■■□□□ 1.45
CHD4-214ENST00000545942 USP18Q9UMW8 372 aa24.1■■□□□ 1.45
CHD4-214ENST00000545942 DMXL1Q9Y485 3027 aa24.09■■□□□ 1.45
CHD4-214ENST00000545942 TGM1P22735 817 aa24.09■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms