RNA–Protein interactions for RNA: ENST00000545913.5

CIT-217, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 5

Gene CIT, Length 8,520 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-217ENST00000545913 OGTO15294 1046 aa12.11□□□□□ -0.47
CIT-217ENST00000545913 AP1G2O75843 785 aa12.11□□□□□ -0.47
CIT-217ENST00000545913 KLRC1P26715 233 aa12.11□□□□□ -0.47
CIT-217ENST00000545913 RAD9BQ6WBX8 426 aa12.11□□□□□ -0.47
CIT-217ENST00000545913 SAMD3Q8N6K7 520 aa12.11□□□□□ -0.47
CIT-217ENST00000545913 C1orf131Q8NDD1 294 aaKnown RBP12.11□□□□□ -0.47
CIT-217ENST00000545913 AGBL3Q8NEM8 1001 aa12.11□□□□□ -0.47
CIT-217ENST00000545913 FAM118BQ9BPY3 351 aa12.11□□□□□ -0.47
CIT-217ENST00000545913 ADGRE3Q9BY15 652 aa12.11□□□□□ -0.47
CIT-217ENST00000545913 DEFB129Q9H1M3 183 aa12.11□□□□□ -0.47
CIT-217ENST00000545913 RMND5AQ9H871 391 aa12.11□□□□□ -0.47
CIT-217ENST00000545913 TRIM49D1C9J1S8 452 aa12.11□□□□□ -0.47
CIT-217ENST00000545913 USP1O94782 785 aa12.11□□□□□ -0.47
CIT-217ENST00000545913 MMP14P50281 582 aa12.11□□□□□ -0.47
CIT-217ENST00000545913 ZNF484Q5JVG2 852 aa12.11□□□□□ -0.47
CIT-217ENST00000545913 TTC33Q6PID6 262 aaPredicted RBP12.11□□□□□ -0.47
CIT-217ENST00000545913 SUGP1Q8IWZ8 645 aaKnown RBP12.11□□□□□ -0.47
CIT-217ENST00000545913 GLT1D1Q96MS3 346 aa12.11□□□□□ -0.47
CIT-217ENST00000545913 THUMPD3Q9BV44 507 aaKnown RBP12.11□□□□□ -0.47
CIT-217ENST00000545913 MTMR12Q9C0I1 747 aa12.11□□□□□ -0.47
CIT-217ENST00000545913 AP4S1Q9Y587 144 aa12.11□□□□□ -0.47
CIT-217ENST00000545913 B3GAT3O94766 335 aa12.11□□□□□ -0.47
CIT-217ENST00000545913 EGFRP00533 1210 aa12.11□□□□□ -0.47
CIT-217ENST00000545913 ASS1P00966 412 aaKnown RBP12.11□□□□□ -0.47
CIT-217ENST00000545913 APLFQ8IW19 511 aaPredicted RBP12.11□□□□□ -0.47
CIT-217ENST00000545913 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.11□□□□□ -0.47
CIT-217ENST00000545913 HMGB3O15347 200 aaKnown RBP12.11□□□□□ -0.47
CIT-217ENST00000545913 VPS26AO75436 327 aa12.11□□□□□ -0.47
CIT-217ENST00000545913 LSM8O95777 96 aaKnown RBP12.11□□□□□ -0.47
CIT-217ENST00000545913 ALOX15P16050 662 aaPredicted RBP12.11□□□□□ -0.47
CIT-217ENST00000545913 KRR1Q13601 381 aaKnown RBP12.11□□□□□ -0.47
CIT-217ENST00000545913 SLC30A9Q6PML9 568 aa12.11□□□□□ -0.47
CIT-217ENST00000545913 UBXN6Q9BZV1 441 aa12.11□□□□□ -0.47
CIT-217ENST00000545913 THAP2Q9H0W7 228 aa12.11□□□□□ -0.47
CIT-217ENST00000545913 EPS8L2Q9H6S3 715 aa12.11□□□□□ -0.47
CIT-217ENST00000545913 EPB41L4AQ9HCS5 686 aaPredicted RBP12.11□□□□□ -0.47
CIT-217ENST00000545913 ARHGEF28Q8N1W1 1705 aaKnown RBP12.11□□□□□ -0.47
CIT-217ENST00000545913 RNF103O00237 685 aa12.11□□□□□ -0.47
CIT-217ENST00000545913 PEX5P50542 639 aa12.11□□□□□ -0.47
CIT-217ENST00000545913 DNAJC3Q13217 504 aa12.11□□□□□ -0.47
CIT-217ENST00000545913 CHI3L1P36222 383 aaPredicted RBP12.1□□□□□ -0.47
CIT-217ENST00000545913 CYP51A1Q16850 503 aa12.1□□□□□ -0.47
CIT-217ENST00000545913 OR2W6PQ8NHA6 318 aa12.1□□□□□ -0.47
CIT-217ENST00000545913 UCMAQ8WVF2 138 aa12.1□□□□□ -0.47
CIT-217ENST00000545913 PDGFCQ9NRA1 345 aa12.1□□□□□ -0.47
CIT-217ENST00000545913 DIP2BQ9P265 1576 aa12.1□□□□□ -0.47
CIT-217ENST00000545913 IQSEC2Q5JU85 1478 aa12.1□□□□□ -0.47
CIT-217ENST00000545913 IGF2BP3O00425 579 aaKnown RBP eCLIP12.1□□□□□ -0.47
CIT-217ENST00000545913 NCAM2O15394 837 aa12.1□□□□□ -0.47
CIT-217ENST00000545913 DGKIO75912 1065 aa12.1□□□□□ -0.47
CIT-217ENST00000545913 CYP11B2P19099 503 aa12.1□□□□□ -0.47
CIT-217ENST00000545913 ARID3BQ8IVW6 561 aaPredicted RBP12.1□□□□□ -0.47
CIT-217ENST00000545913 RSPH1Q8WYR4 309 aa12.1□□□□□ -0.47
CIT-217ENST00000545913 USP6NLQ92738 828 aa12.1□□□□□ -0.47
CIT-217ENST00000545913 MRPL48Q96GC5 212 aaKnown RBP12.1□□□□□ -0.47
CIT-217ENST00000545913 DRG1Q9Y295 367 aaKnown RBP12.1□□□□□ -0.47
CIT-217ENST00000545913 F8W810 466 aa12.1□□□□□ -0.47
CIT-217ENST00000545913 RASSF9O75901 435 aa12.1□□□□□ -0.47
CIT-217ENST00000545913 RRM2P31350 389 aa12.1□□□□□ -0.47
CIT-217ENST00000545913 GTF2A2P52657 109 aa12.1□□□□□ -0.47
CIT-217ENST00000545913 ATXN3P54252 364 aaPredicted RBP12.1□□□□□ -0.47
CIT-217ENST00000545913 MTA1Q13330 715 aa12.1□□□□□ -0.47
CIT-217ENST00000545913 C11orf96Q7Z7L8 435 aa12.1□□□□□ -0.47
CIT-217ENST00000545913 CNBD2Q96M20 576 aa12.1□□□□□ -0.47
CIT-217ENST00000545913 CHD4Q14839 1912 aa12.1□□□□□ -0.47
CIT-217ENST00000545913 NWD1Q149M9 1564 aa12.1□□□□□ -0.47
CIT-217ENST00000545913 MZF1P28698 734 aaPredicted RBP12.1□□□□□ -0.47
CIT-217ENST00000545913 GRK3P35626 688 aa12.1□□□□□ -0.47
CIT-217ENST00000545913 SEL1L3Q68CR1 1132 aa12.1□□□□□ -0.47
CIT-217ENST00000545913 EFCAB1Q9HAE3 211 aa12.1□□□□□ -0.47
CIT-217ENST00000545913 CNTNAP4Q9C0A0 1308 aa12.1□□□□□ -0.47
CIT-217ENST00000545913 NFIBO00712 420 aa12.1□□□□□ -0.47
CIT-217ENST00000545913 C2CD2LO14523 706 aa12.1□□□□□ -0.47
CIT-217ENST00000545913 MSH4O15457 936 aa12.1□□□□□ -0.47
CIT-217ENST00000545913 CRTAMO95727 393 aa12.1□□□□□ -0.47
CIT-217ENST00000545913 CYP2B6P20813 491 aa12.1□□□□□ -0.47
CIT-217ENST00000545913 TARSP26639 723 aaKnown RBP12.1□□□□□ -0.47
CIT-217ENST00000545913 IRAK1P51617 712 aa12.1□□□□□ -0.47
CIT-217ENST00000545913 CCDC60Q8IWA6 550 aaPredicted RBP12.1□□□□□ -0.47
CIT-217ENST00000545913 ZCWPW1Q9H0M4 648 aa12.1□□□□□ -0.47
CIT-217ENST00000545913 ZBTB12Q9Y330 459 aaPredicted RBP12.1□□□□□ -0.47
CIT-217ENST00000545913 ADGRA3Q8IWK6 1321 aa12.1□□□□□ -0.47
CIT-217ENST00000545913 TM9SF1O15321 606 aa12.1□□□□□ -0.47
CIT-217ENST00000545913 DYRK3O43781 588 aa12.1□□□□□ -0.47
CIT-217ENST00000545913 ACADSP16219 412 aa12.1□□□□□ -0.47
CIT-217ENST00000545913 THPOP40225 353 aa12.1□□□□□ -0.47
CIT-217ENST00000545913 FBXO32Q969P5 355 aa12.1□□□□□ -0.47
CIT-217ENST00000545913 ERCC6L2Q5T890 1561 aa12.1□□□□□ -0.47
CIT-217ENST00000545913 GZMAP12544 262 aa12.09□□□□□ -0.47
CIT-217ENST00000545913 SLC26A2P50443 739 aa12.09□□□□□ -0.47
CIT-217ENST00000545913 KPNA1P52294 538 aaPredicted RBP12.09□□□□□ -0.47
CIT-217ENST00000545913 IRX1P78414 480 aaPredicted RBP12.09□□□□□ -0.47
CIT-217ENST00000545913 AMHR2Q16671 573 aa12.09□□□□□ -0.47
CIT-217ENST00000545913 LINC00116Q8NCU8 138 aa12.09□□□□□ -0.47
CIT-217ENST00000545913 C10orf88Q9H8K7 445 aa12.09□□□□□ -0.47
CIT-217ENST00000545913 PTPRUQ92729 1446 aa12.09□□□□□ -0.47
CIT-217ENST00000545913 C1orf167Q5SNV9 1468 aa12.09□□□□□ -0.47
CIT-217ENST00000545913 HOXA2O43364 376 aa12.09□□□□□ -0.47
CIT-217ENST00000545913 RNASEH1O60930 286 aaKnown RBP12.09□□□□□ -0.47
CIT-217ENST00000545913 FBXO21O94952 628 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms