RNA–Protein interactions for RNA: ENST00000545658.1

LRP6-207, Transcript of LDL receptor related protein 6, humanhuman

TSL 3

Gene LRP6, Length 435 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-207ENST00000545658 PLXNA4Q9HCM2 1894 aa4.47□□□□□ -1.69
LRP6-207ENST00000545658 TRBV23-1A0A0A0MS06 115 aa4.47□□□□□ -1.69
LRP6-207ENST00000545658 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.47□□□□□ -1.69
LRP6-207ENST00000545658 PDPK1O15530 556 aa4.47□□□□□ -1.69
LRP6-207ENST00000545658 LRP3O75074 770 aa4.47□□□□□ -1.69
LRP6-207ENST00000545658 CLASP2O75122 1294 aaKnown RBP4.47□□□□□ -1.69
LRP6-207ENST00000545658 ZNF623O75123 536 aa4.47□□□□□ -1.69
LRP6-207ENST00000545658 SURF6O75683 361 aaKnown RBP4.47□□□□□ -1.69
LRP6-207ENST00000545658 LGALS2P05162 132 aa4.47□□□□□ -1.69
LRP6-207ENST00000545658 ZNF888P0CJ79 500 aaPredicted RBP4.47□□□□□ -1.69
LRP6-207ENST00000545658 SRGAP2CP0DJJ0 459 aa4.47□□□□□ -1.69
LRP6-207ENST00000545658 SCG2P13521 617 aa4.47□□□□□ -1.69
LRP6-207ENST00000545658 C6P13671 934 aa4.47□□□□□ -1.69
LRP6-207ENST00000545658 KRT15P19012 456 aa4.47□□□□□ -1.69
LRP6-207ENST00000545658 SLC16A2P36021 539 aa4.47□□□□□ -1.69
LRP6-207ENST00000545658 ATP8B2P98198 1209 aa4.47□□□□□ -1.69
LRP6-207ENST00000545658 GUCY1A3Q02108 690 aa4.47□□□□□ -1.69
LRP6-207ENST00000545658 SSRP1Q08945 709 aaKnown RBP4.47□□□□□ -1.69
LRP6-207ENST00000545658 STXBP2Q15833 593 aa4.47□□□□□ -1.69
LRP6-207ENST00000545658 HSDL1Q3SXM5 330 aa4.47□□□□□ -1.69
LRP6-207ENST00000545658 FBXO47Q5MNV8 452 aa4.47□□□□□ -1.69
LRP6-207ENST00000545658 FOXB2Q5VYV0 432 aa4.47□□□□□ -1.69
LRP6-207ENST00000545658 IL31Q6EBC2 164 aa4.47□□□□□ -1.69
LRP6-207ENST00000545658 TSHZ1Q6ZSZ6 1077 aa4.47□□□□□ -1.69
LRP6-207ENST00000545658 RTN4RL1Q86UN2 441 aaPredicted RBP4.47□□□□□ -1.69
LRP6-207ENST00000545658 PTRH1Q86Y79 214 aaKnown RBP4.47□□□□□ -1.69
LRP6-207ENST00000545658 SCUBE1Q8IWY4 988 aa4.47□□□□□ -1.69
LRP6-207ENST00000545658 COLGALT1Q8NBJ5 622 aa4.47□□□□□ -1.69
LRP6-207ENST00000545658 SLC16A11Q8NCK7 471 aa4.47□□□□□ -1.69
LRP6-207ENST00000545658 SSH3Q8TE77 659 aa4.47□□□□□ -1.69
LRP6-207ENST00000545658 NSUN6Q8TEA1 469 aaKnown RBP4.47□□□□□ -1.69
LRP6-207ENST00000545658 RSAD2Q8WXG1 361 aa4.47□□□□□ -1.69
LRP6-207ENST00000545658 NELL1Q92832 810 aa4.47□□□□□ -1.69
LRP6-207ENST00000545658 ZNF669Q96BR6 464 aaPredicted RBP4.47□□□□□ -1.69
LRP6-207ENST00000545658 AJUBAQ96IF1 538 aa4.47□□□□□ -1.69
LRP6-207ENST00000545658 SPATA33Q96N06 139 aa4.47□□□□□ -1.69
LRP6-207ENST00000545658 WWC2-AS2Q96NR7 200 aa4.47□□□□□ -1.69
LRP6-207ENST00000545658 IPO9Q96P70 1041 aaKnown RBP4.47□□□□□ -1.69
LRP6-207ENST00000545658 LMF1Q96S06 567 aa4.47□□□□□ -1.69
LRP6-207ENST00000545658 CDK5RAP1Q96SZ6 601 aaKnown RBP4.47□□□□□ -1.69
LRP6-207ENST00000545658 DNAJC2Q99543 621 aaKnown RBP4.47□□□□□ -1.69
LRP6-207ENST00000545658 FTHL17Q9BXU8 183 aa4.47□□□□□ -1.69
LRP6-207ENST00000545658 ZNF287Q9HBT7 754 aa4.47□□□□□ -1.69
LRP6-207ENST00000545658 ARHGEF3Q9NR81 526 aa4.47□□□□□ -1.69
LRP6-207ENST00000545658 SETD4Q9NVD3 440 aa4.47□□□□□ -1.69
LRP6-207ENST00000545658 TCAF1Q9Y4C2 921 aa4.47□□□□□ -1.69
LRP6-207ENST00000545658 PCDHA8Q9Y5H6 950 aa4.47□□□□□ -1.69
LRP6-207ENST00000545658 CACNA1IQ9P0X4 2223 aa4.47□□□□□ -1.69
LRP6-207ENST00000545658 LAMA5O15230 3695 aa4.47□□□□□ -1.69
LRP6-207ENST00000545658 MYH4Q9Y623 1939 aa4.46□□□□□ -1.69
LRP6-207ENST00000545658 UNC79Q9P2D8 2635 aa4.46□□□□□ -1.69
LRP6-207ENST00000545658 ESYT3A0FGR9 886 aa4.46□□□□□ -1.7
LRP6-207ENST00000545658 FAM90A27PA6NNH2 459 aa4.46□□□□□ -1.7
LRP6-207ENST00000545658 TBKBP1A7MCY6 615 aa4.46□□□□□ -1.7
LRP6-207ENST00000545658 PATE3B3GLJ2 98 aa4.46□□□□□ -1.7
LRP6-207ENST00000545658 AQP7O14520 342 aa4.46□□□□□ -1.7
LRP6-207ENST00000545658 KCNK3O14649 394 aa4.46□□□□□ -1.7
LRP6-207ENST00000545658 N4BP1O75113 896 aaKnown RBP4.46□□□□□ -1.7
LRP6-207ENST00000545658 EIF3JO75822 258 aaKnown RBP4.46□□□□□ -1.7
LRP6-207ENST00000545658 GGPS1O95749 300 aa4.46□□□□□ -1.7
LRP6-207ENST00000545658 RETP07949 1114 aa4.46□□□□□ -1.7
LRP6-207ENST00000545658 TSPY3P0CV98 308 aa4.46□□□□□ -1.7
LRP6-207ENST00000545658 TSPY8P0CW00 308 aa4.46□□□□□ -1.7
LRP6-207ENST00000545658 PYGMP11217 842 aa4.46□□□□□ -1.7
LRP6-207ENST00000545658 PTPN1P18031 435 aaKnown RBP4.46□□□□□ -1.7
LRP6-207ENST00000545658 LAG3P18627 525 aa4.46□□□□□ -1.7
LRP6-207ENST00000545658 CD52P31358 61 aa4.46□□□□□ -1.7
LRP6-207ENST00000545658 STARD6P59095 220 aa4.46□□□□□ -1.7
LRP6-207ENST00000545658 DBPQ10586 325 aaPredicted RBP4.46□□□□□ -1.7
LRP6-207ENST00000545658 SMC1AQ14683 1233 aaKnown RBP4.46□□□□□ -1.7
LRP6-207ENST00000545658 USP10Q14694 798 aaKnown RBP4.46□□□□□ -1.7
LRP6-207ENST00000545658 NONOQ15233 471 aaKnown RBP eCLIP4.46□□□□□ -1.7
LRP6-207ENST00000545658 GPR19Q15760 415 aa4.46□□□□□ -1.7
LRP6-207ENST00000545658 CSRP2Q16527 193 aa4.46□□□□□ -1.7
LRP6-207ENST00000545658 LPAL2Q16609 132 aa4.46□□□□□ -1.7
LRP6-207ENST00000545658 CCDC96Q2M329 555 aa4.46□□□□□ -1.7
LRP6-207ENST00000545658 CELF3Q5SZQ8 465 aaKnown RBP4.46□□□□□ -1.7
LRP6-207ENST00000545658 SYDE2Q5VT97 1194 aa4.46□□□□□ -1.7
LRP6-207ENST00000545658 LAIR1Q6GTX8 287 aa4.46□□□□□ -1.7
LRP6-207ENST00000545658 TAF2Q6P1X5 1199 aa4.46□□□□□ -1.7
LRP6-207ENST00000545658 DCLRE1AQ6PJP8 1040 aa4.46□□□□□ -1.7
LRP6-207ENST00000545658 BTNL9Q6UXG8 535 aa4.46□□□□□ -1.7
LRP6-207ENST00000545658 MAMDC2Q7Z304 686 aaPredicted RBP4.46□□□□□ -1.7
LRP6-207ENST00000545658 AACSQ86V21 672 aa4.46□□□□□ -1.7
LRP6-207ENST00000545658 OSTM1Q86WC4 334 aa4.46□□□□□ -1.7
LRP6-207ENST00000545658 LURAP1LQ8IV03 231 aa4.46□□□□□ -1.7
LRP6-207ENST00000545658 NLGN4XQ8N0W4 816 aa4.46□□□□□ -1.7
LRP6-207ENST00000545658 SLC44A3Q8N4M1 653 aa4.46□□□□□ -1.7
LRP6-207ENST00000545658 MRPL43Q8N983 215 aaKnown RBP4.46□□□□□ -1.7
LRP6-207ENST00000545658 GIMAP8Q8ND71 665 aaPredicted RBP4.46□□□□□ -1.7
LRP6-207ENST00000545658 PCDH19Q8TAB3 1148 aa4.46□□□□□ -1.7
LRP6-207ENST00000545658 Q8TCH9 128 aa4.46□□□□□ -1.7
LRP6-207ENST00000545658 LMBR1Q8WVP7 490 aa4.46□□□□□ -1.7
LRP6-207ENST00000545658 MAP4K1Q92918 833 aa4.46□□□□□ -1.7
LRP6-207ENST00000545658 PTPRN2Q92932 1015 aa4.46□□□□□ -1.7
LRP6-207ENST00000545658 FBXW5Q969U6 566 aa4.46□□□□□ -1.7
LRP6-207ENST00000545658 TAAR1Q96RJ0 339 aa4.46□□□□□ -1.7
LRP6-207ENST00000545658 IWS1Q96ST2 819 aa4.46□□□□□ -1.7
LRP6-207ENST00000545658 CWH43Q9H720 699 aa4.46□□□□□ -1.7
LRP6-207ENST00000545658 AGO3Q9H9G7 860 aaKnown RBP4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms