RNA–Protein interactions for RNA: ENST00000545279.5

SMAD5-211, Transcript of SMAD family member 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD5, Length 7,012 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-211ENST00000545279 KRT38O76015 456 aa6.82□□□□□ -1.32
SMAD5-211ENST00000545279 ITGB6P18564 788 aa6.82□□□□□ -1.32
SMAD5-211ENST00000545279 NOS2P35228 1153 aa6.82□□□□□ -1.32
SMAD5-211ENST00000545279 MAPK9P45984 424 aa6.82□□□□□ -1.32
SMAD5-211ENST00000545279 ROR1Q01973 937 aa6.82□□□□□ -1.32
SMAD5-211ENST00000545279 DRAP1Q14919 205 aaPredicted RBP6.82□□□□□ -1.32
SMAD5-211ENST00000545279 TTC39BQ5VTQ0 682 aaPredicted RBP6.82□□□□□ -1.32
SMAD5-211ENST00000545279 HLA-DQA1Q5Y7H0 255 aa6.82□□□□□ -1.32
SMAD5-211ENST00000545279 JADE1Q6IE81 842 aa6.82□□□□□ -1.32
SMAD5-211ENST00000545279 TMC5Q6UXY8 1006 aa6.82□□□□□ -1.32
SMAD5-211ENST00000545279 JAMLQ86YT9 394 aa6.82□□□□□ -1.32
SMAD5-211ENST00000545279 CCDC60Q8IWA6 550 aaPredicted RBP6.82□□□□□ -1.32
SMAD5-211ENST00000545279 FAF2Q96CS3 445 aa6.82□□□□□ -1.32
SMAD5-211ENST00000545279 KAZALD1Q96I82 304 aa6.82□□□□□ -1.32
SMAD5-211ENST00000545279 CFAP97Q9P2B7 532 aa6.82□□□□□ -1.32
SMAD5-211ENST00000545279 KIAA1210Q9ULL0 1709 aa6.82□□□□□ -1.32
SMAD5-211ENST00000545279 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.82□□□□□ -1.32
SMAD5-211ENST00000545279 PRPF4O43172 522 aaKnown RBP eCLIP6.82□□□□□ -1.32
SMAD5-211ENST00000545279 KRT37O76014 449 aa6.82□□□□□ -1.32
SMAD5-211ENST00000545279 AKT2P31751 481 aa6.82□□□□□ -1.32
SMAD5-211ENST00000545279 ITPRIPL2Q3MIP1 535 aa6.82□□□□□ -1.32
SMAD5-211ENST00000545279 PTRHD1Q6GMV3 140 aaKnown RBP6.82□□□□□ -1.32
SMAD5-211ENST00000545279 KLHL7Q8IXQ5 586 aa6.82□□□□□ -1.32
SMAD5-211ENST00000545279 SLC22A17Q8WUG5 538 aa6.82□□□□□ -1.32
SMAD5-211ENST00000545279 TMEM176AQ96HP8 235 aa6.82□□□□□ -1.32
SMAD5-211ENST00000545279 PCDHGB4Q9UN71 923 aa6.82□□□□□ -1.32
SMAD5-211ENST00000545279 INPPL1O15357 1258 aa6.82□□□□□ -1.32
SMAD5-211ENST00000545279 CSF2RAP15509 400 aa6.82□□□□□ -1.32
SMAD5-211ENST00000545279 FGFR4P22455 802 aa6.82□□□□□ -1.32
SMAD5-211ENST00000545279 FMO5P49326 533 aa6.82□□□□□ -1.32
SMAD5-211ENST00000545279 YWHAZP63104 245 aaKnown RBP6.82□□□□□ -1.32
SMAD5-211ENST00000545279 TBCCQ15814 346 aa6.82□□□□□ -1.32
SMAD5-211ENST00000545279 PBKQ96KB5 322 aa6.82□□□□□ -1.32
SMAD5-211ENST00000545279 HACD3Q9P035 362 aa6.82□□□□□ -1.32
SMAD5-211ENST00000545279 APEX2Q9UBZ4 518 aa6.82□□□□□ -1.32
SMAD5-211ENST00000545279 GABRQQ9UN88 632 aa6.82□□□□□ -1.32
SMAD5-211ENST00000545279 ZWINTO95229 277 aa6.81□□□□□ -1.32
SMAD5-211ENST00000545279 CRTAMO95727 393 aa6.81□□□□□ -1.32
SMAD5-211ENST00000545279 CUL4AQ13619 759 aa6.81□□□□□ -1.32
SMAD5-211ENST00000545279 ZNF618Q5T7W0 954 aa6.81□□□□□ -1.32
SMAD5-211ENST00000545279 LGI2Q8N0V4 545 aa6.81□□□□□ -1.32
SMAD5-211ENST00000545279 UBLCP1Q8WVY7 318 aaPredicted RBP6.81□□□□□ -1.32
SMAD5-211ENST00000545279 FBXL18Q96ME1 805 aa6.81□□□□□ -1.32
SMAD5-211ENST00000545279 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.81□□□□□ -1.32
SMAD5-211ENST00000545279 PGAP2Q9UHJ9 254 aa6.81□□□□□ -1.32
SMAD5-211ENST00000545279 DDHD2O94830 711 aa6.81□□□□□ -1.32
SMAD5-211ENST00000545279 APOA4P06727 396 aa6.81□□□□□ -1.32
SMAD5-211ENST00000545279 KRT20P35900 424 aa6.81□□□□□ -1.32
SMAD5-211ENST00000545279 ESRP1Q6NXG1 681 aaKnown RBP6.81□□□□□ -1.32
SMAD5-211ENST00000545279 FOXR1Q6PIV2 292 aa6.81□□□□□ -1.32
SMAD5-211ENST00000545279 KCNB2Q92953 911 aa6.81□□□□□ -1.32
SMAD5-211ENST00000545279 PGLYRP2Q96PD5 576 aa6.81□□□□□ -1.32
SMAD5-211ENST00000545279 OSGEPL1Q9H4B0 414 aa6.81□□□□□ -1.32
SMAD5-211ENST00000545279 COMMD8Q9NX08 183 aa6.81□□□□□ -1.32
SMAD5-211ENST00000545279 PRR5-ARHGAP8B1AHC4 643 aa6.81□□□□□ -1.32
SMAD5-211ENST00000545279 GOLGA8TH3BQL2 631 aa6.81□□□□□ -1.32
SMAD5-211ENST00000545279 NPC1O15118 1278 aa6.81□□□□□ -1.32
SMAD5-211ENST00000545279 MLYCDO95822 493 aa6.81□□□□□ -1.32
SMAD5-211ENST00000545279 DGKGP49619 791 aa6.81□□□□□ -1.32
SMAD5-211ENST00000545279 BCL2L1Q07817 233 aa6.81□□□□□ -1.32
SMAD5-211ENST00000545279 NNTQ13423 1086 aa6.81□□□□□ -1.32
SMAD5-211ENST00000545279 CAMK2GQ13555 558 aaPredicted RBP6.81□□□□□ -1.32
SMAD5-211ENST00000545279 RTL10Q7L3V2 364 aa6.81□□□□□ -1.32
SMAD5-211ENST00000545279 NLRP9Q7RTR0 991 aa6.81□□□□□ -1.32
SMAD5-211ENST00000545279 GPR135Q8IZ08 494 aa6.81□□□□□ -1.32
SMAD5-211ENST00000545279 NUP93Q8N1F7 819 aa6.81□□□□□ -1.32
SMAD5-211ENST00000545279 EXD1Q8NHP7 514 aa6.81□□□□□ -1.32
SMAD5-211ENST00000545279 FOXJ1Q92949 421 aa6.81□□□□□ -1.32
SMAD5-211ENST00000545279 NXPE3Q969Y0 559 aa6.81□□□□□ -1.32
SMAD5-211ENST00000545279 LRRC46Q96FV0 321 aa6.81□□□□□ -1.32
SMAD5-211ENST00000545279 OTUB1Q96FW1 271 aaPredicted RBP6.81□□□□□ -1.32
SMAD5-211ENST00000545279 HSFY1Q96LI6 401 aa6.81□□□□□ -1.32
SMAD5-211ENST00000545279 TRIM31Q9BZY9 425 aa6.81□□□□□ -1.32
SMAD5-211ENST00000545279 STRADBQ9C0K7 418 aa6.81□□□□□ -1.32
SMAD5-211ENST00000545279 TBC1D3DA0A087WVF3 549 aa6.81□□□□□ -1.32
SMAD5-211ENST00000545279 A0A087WWV3 80 aa6.81□□□□□ -1.32
SMAD5-211ENST00000545279 TBC1D3IA0A087WXS9 549 aa6.81□□□□□ -1.32
SMAD5-211ENST00000545279 TBC1D3EA0A087X179 549 aa6.81□□□□□ -1.32
SMAD5-211ENST00000545279 TBC1D3KA0A087X1G2 549 aa6.81□□□□□ -1.32
SMAD5-211ENST00000545279 TBC1D3FA6NER0 549 aaPredicted RBP6.81□□□□□ -1.32
SMAD5-211ENST00000545279 TBC1D3LB9A6J9 549 aa6.81□□□□□ -1.32
SMAD5-211ENST00000545279 PGRMC1O00264 195 aaKnown RBP6.81□□□□□ -1.32
SMAD5-211ENST00000545279 CCL16O15467 120 aa6.81□□□□□ -1.32
SMAD5-211ENST00000545279 TBC1D3HP0C7X1 549 aa6.81□□□□□ -1.32
SMAD5-211ENST00000545279 HDAC4P56524 1084 aa6.81□□□□□ -1.32
SMAD5-211ENST00000545279 PTK6Q13882 451 aa6.81□□□□□ -1.32
SMAD5-211ENST00000545279 ELOAQ14241 798 aaKnown RBP6.81□□□□□ -1.32
SMAD5-211ENST00000545279 UAP1L1Q3KQV9 507 aa6.81□□□□□ -1.32
SMAD5-211ENST00000545279 TBC1D3GQ6DHY5 549 aa6.81□□□□□ -1.32
SMAD5-211ENST00000545279 TBC1D3CQ6IPX1 549 aa6.81□□□□□ -1.32
SMAD5-211ENST00000545279 GPAT2Q6NUI2 795 aa6.81□□□□□ -1.32
SMAD5-211ENST00000545279 CYP2U1Q7Z449 544 aa6.81□□□□□ -1.32
SMAD5-211ENST00000545279 TBC1D3Q8IZP1 549 aaPredicted RBP6.81□□□□□ -1.32
SMAD5-211ENST00000545279 ZNF564Q8TBZ8 553 aaPredicted RBP6.81□□□□□ -1.32
SMAD5-211ENST00000545279 FUBP3Q96I24 572 aaKnown RBP eCLIP6.81□□□□□ -1.321e-9■■■■■ 38.1
SMAD5-211ENST00000545279 TIMM13Q9Y5L4 95 aaPredicted RBP6.81□□□□□ -1.32
SMAD5-211ENST00000545279 FAM95CA0A1B0GW59 222 aa6.81□□□□□ -1.32
SMAD5-211ENST00000545279 UBA6A0AVT1 1052 aaPredicted RBP6.81□□□□□ -1.32
SMAD5-211ENST00000545279 SOWAHBA6NEL2 793 aa6.81□□□□□ -1.32
SMAD5-211ENST00000545279 SERPINF2P08697 491 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms