RNA–Protein interactions for RNA: ENST00000545015.1

POLE-222, Transcript of DNA polymerase epsilon, catalytic subunit, human

TSL 2

Gene POLE, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLE-222	ENST00000545015	FILIP1	Q7Z7B0	1213 aa		14.22	□□□□□ -0.13
POLE-222	ENST00000545015	SYNPO	Q8N3V7	929 aa		14.22	□□□□□ -0.13
POLE-222	ENST00000545015	ARL14EP	Q8N8R7	260 aa	Predicted RBP	14.22	□□□□□ -0.13
POLE-222	ENST00000545015	ZMIZ2	Q8NF64	920 aa		14.22	□□□□□ -0.13
POLE-222	ENST00000545015	OSCP1	Q8WVF1	389 aa		14.22	□□□□□ -0.13
POLE-222	ENST00000545015	SEMA4D	Q92854	862 aa		14.22	□□□□□ -0.13
POLE-222	ENST00000545015	SLC35C1	Q96A29	364 aa		14.22	□□□□□ -0.13
POLE-222	ENST00000545015	EEF2KMT	Q96G04	330 aa		14.22	□□□□□ -0.13
POLE-222	ENST00000545015	TWNK	Q96RR1	684 aa		14.22	□□□□□ -0.13
POLE-222	ENST00000545015	CYP2S1	Q96SQ9	504 aa		14.22	□□□□□ -0.13
POLE-222	ENST00000545015	KCNK16	Q96T55	309 aa		14.22	□□□□□ -0.13
POLE-222	ENST00000545015	SMO	Q99835	787 aa		14.22	□□□□□ -0.13
POLE-222	ENST00000545015	DUSP9	Q99956	384 aa	Known RBP	14.22	□□□□□ -0.13
POLE-222	ENST00000545015	NT5C1A	Q9BXI3	368 aa		14.22	□□□□□ -0.13
POLE-222	ENST00000545015	METTL14	Q9HCE5	456 aa	Known RBP	14.22	□□□□□ -0.13
POLE-222	ENST00000545015	PNPLA8	Q9NP80	782 aa		14.22	□□□□□ -0.13
POLE-222	ENST00000545015	SPATA6	Q9NWH7	488 aa	Predicted RBP	14.22	□□□□□ -0.13
POLE-222	ENST00000545015	ARMCX3	Q9UH62	379 aa	Predicted RBP	14.22	□□□□□ -0.13
POLE-222	ENST00000545015	TRIM49B	A6NDI0	452 aa		14.21	□□□□□ -0.13
POLE-222	ENST00000545015	PPP1R3G	B7ZBB8	358 aa		14.21	□□□□□ -0.13
POLE-222	ENST00000545015	AP1G2	O75843	785 aa		14.21	□□□□□ -0.13
POLE-222	ENST00000545015	PAPSS2	O95340	614 aa	Predicted RBP	14.21	□□□□□ -0.13
POLE-222	ENST00000545015	CD44	P16070	742 aa	Known RBP	14.21	□□□□□ -0.13
POLE-222	ENST00000545015	YWHAQ	P27348	245 aa		14.21	□□□□□ -0.13
POLE-222	ENST00000545015	SOX9	P48436	509 aa		14.21	□□□□□ -0.13
POLE-222	ENST00000545015	TUB	P50607	506 aa		14.21	□□□□□ -0.13
POLE-222	ENST00000545015	SLC5A3	P53794	718 aa		14.21	□□□□□ -0.13
POLE-222	ENST00000545015	LRRC32	Q14392	662 aa		14.21	□□□□□ -0.13
POLE-222	ENST00000545015	WDR44	Q5JSH3	913 aa		14.21	□□□□□ -0.13
POLE-222	ENST00000545015	DGKK	Q5KSL6	1271 aa		14.21	□□□□□ -0.13
POLE-222	ENST00000545015	TTI2	Q6NXR4	508 aa		14.21	□□□□□ -0.13
POLE-222	ENST00000545015	CC2D1A	Q6P1N0	951 aa	Predicted RBP	14.21	□□□□□ -0.13
POLE-222	ENST00000545015	TRIML1	Q8N9V2	468 aa		14.21	□□□□□ -0.13
POLE-222	ENST00000545015	SLC2A14	Q8TDB8	520 aa		14.21	□□□□□ -0.13
POLE-222	ENST00000545015	SH3RF2	Q8TEC5	729 aa		14.21	□□□□□ -0.13
POLE-222	ENST00000545015	CHFR	Q96EP1	664 aa		14.21	□□□□□ -0.13
POLE-222	ENST00000545015	FAM126A	Q9BYI3	521 aa	Predicted RBP	14.21	□□□□□ -0.13
POLE-222	ENST00000545015	DNAI2	Q9GZS0	605 aa		14.21	□□□□□ -0.13
POLE-222	ENST00000545015	LMAN1L	Q9HAT1	526 aa		14.21	□□□□□ -0.13
POLE-222	ENST00000545015	TRPC7	Q9HCX4	862 aa		14.21	□□□□□ -0.13
POLE-222	ENST00000545015	KRT82	Q9NSB4	513 aa		14.21	□□□□□ -0.13
POLE-222	ENST00000545015	NDRG2	Q9UN36	371 aa	Known RBP	14.21	□□□□□ -0.13
POLE-222	ENST00000545015	CACNA1I	Q9P0X4	2223 aa		14.21	□□□□□ -0.14
POLE-222	ENST00000545015	PATJ	Q8NI35	1801 aa		14.2	□□□□□ -0.14
POLE-222	ENST00000545015	ANAPC1	Q9H1A4	1944 aa		14.2	□□□□□ -0.14
POLE-222	ENST00000545015	BICDL2	A1A5D9	508 aa		14.2	□□□□□ -0.14
POLE-222	ENST00000545015	PRR23A	A6NEV1	266 aa		14.2	□□□□□ -0.14
POLE-222	ENST00000545015	OTOL1	A6NHN0	477 aa	Predicted RBP	14.2	□□□□□ -0.14
POLE-222	ENST00000545015	TRDMT1	O14717	391 aa	Known RBP	14.2	□□□□□ -0.14
POLE-222	ENST00000545015	GFRA3	O60609	400 aa		14.2	□□□□□ -0.14
POLE-222	ENST00000545015	CLSTN1	O94985	981 aa		14.2	□□□□□ -0.14
POLE-222	ENST00000545015	TDGF1	P13385	188 aa		14.2	□□□□□ -0.14
POLE-222	ENST00000545015	CCDC130	P13994	396 aa		14.2	□□□□□ -0.14
POLE-222	ENST00000545015	ZXDB	P98169	803 aa		14.2	□□□□□ -0.14
POLE-222	ENST00000545015	AMPD2	Q01433	879 aa		14.2	□□□□□ -0.14
POLE-222	ENST00000545015	MTAP	Q13126	283 aa		14.2	□□□□□ -0.14
POLE-222	ENST00000545015	CCIN	Q13939	588 aa		14.2	□□□□□ -0.14
POLE-222	ENST00000545015	CBWD6	Q4V339	395 aa		14.2	□□□□□ -0.14
POLE-222	ENST00000545015	CBWD3	Q5JTY5	395 aa		14.2	□□□□□ -0.14
POLE-222	ENST00000545015	CBWD5	Q5RIA9	395 aa		14.2	□□□□□ -0.14
POLE-222	ENST00000545015	ZC3H14	Q6PJT7	736 aa	Known RBP	14.2	□□□□□ -0.14
POLE-222	ENST00000545015	SPEM1	Q8N4L4	309 aa		14.2	□□□□□ -0.14
POLE-222	ENST00000545015	C12orf29	Q8N999	325 aa		14.2	□□□□□ -0.14
POLE-222	ENST00000545015	ZBTB44	Q8NCP5	570 aa		14.2	□□□□□ -0.14
POLE-222	ENST00000545015	NKD2	Q969F2	451 aa	Predicted RBP	14.2	□□□□□ -0.14
POLE-222	ENST00000545015	FBXO32	Q969P5	355 aa		14.2	□□□□□ -0.14
POLE-222	ENST00000545015	MED10	Q9BTT4	135 aa		14.2	□□□□□ -0.14
POLE-222	ENST00000545015	RNF38	Q9H0F5	515 aa		14.2	□□□□□ -0.14
POLE-222	ENST00000545015	FBXO44	Q9H4M3	255 aa		14.2	□□□□□ -0.14
POLE-222	ENST00000545015	USP34	Q70CQ2	3546 aa		14.2	□□□□□ -0.14
POLE-222	ENST00000545015	MYO15A	Q9UKN7	3530 aa		14.2	□□□□□ -0.14
POLE-222	ENST00000545015	HHLA1	C9JL84	531 aa		14.19	□□□□□ -0.14
POLE-222	ENST00000545015	BEST1	O76090	585 aa		14.19	□□□□□ -0.14
POLE-222	ENST00000545015	FAM200B	P0CF97	657 aa		14.19	□□□□□ -0.14
POLE-222	ENST00000545015	CCR3	P51677	355 aa		14.19	□□□□□ -0.14
POLE-222	ENST00000545015	MARS	P56192	900 aa	Known RBP	14.19	□□□□□ -0.14
POLE-222	ENST00000545015	ORC1	Q13415	861 aa		14.19	□□□□□ -0.14
POLE-222	ENST00000545015	GAS6	Q14393	721 aa		14.19	□□□□□ -0.14
POLE-222	ENST00000545015	EML3	Q32P44	896 aa		14.19	□□□□□ -0.14
POLE-222	ENST00000545015	TMEM196	Q5HYL7	178 aa		14.19	□□□□□ -0.14
POLE-222	ENST00000545015	TRIM68	Q6AZZ1	485 aa		14.19	□□□□□ -0.14
POLE-222	ENST00000545015	CLEC17A	Q6ZS10	378 aa		14.19	□□□□□ -0.14
POLE-222	ENST00000545015	CLEC20A	Q6ZU45	233 aa		14.19	□□□□□ -0.14
POLE-222	ENST00000545015	ASCL5	Q7RTU5	278 aa		14.19	□□□□□ -0.14
POLE-222	ENST00000545015	DDX42	Q86XP3	938 aa	Known RBP eCLIP	14.19	□□□□□ -0.14
POLE-222	ENST00000545015	SCAMP5	Q8TAC9	235 aa		14.19	□□□□□ -0.14
POLE-222	ENST00000545015	ATP2A3	Q93084	1043 aa		14.19	□□□□□ -0.14
POLE-222	ENST00000545015	CYFIP2	Q96F07	1278 aa		14.19	□□□□□ -0.14
POLE-222	ENST00000545015	EBF3	Q9H4W6	596 aa		14.19	□□□□□ -0.14
POLE-222	ENST00000545015	MMRN2	Q9H8L6	949 aa		14.19	□□□□□ -0.14
POLE-222	ENST00000545015	CISH	Q9NSE2	258 aa		14.19	□□□□□ -0.14
POLE-222	ENST00000545015	FAM49B	Q9NUQ9	324 aa		14.19	□□□□□ -0.14
POLE-222	ENST00000545015	DUS2	Q9NX74	493 aa	Known RBP	14.19	□□□□□ -0.14
POLE-222	ENST00000545015	PCDHGA2	Q9Y5H1	932 aa		14.19	□□□□□ -0.14
POLE-222	ENST00000545015	ZFHX2	Q9C0A1	2572 aa	Predicted RBP	14.19	□□□□□ -0.14
POLE-222	ENST00000545015	LEFTY2	O00292	366 aa		14.18	□□□□□ -0.14
POLE-222	ENST00000545015	P4HA2	O15460	535 aa		14.18	□□□□□ -0.14
POLE-222	ENST00000545015	LILRB5	O75023	590 aa		14.18	□□□□□ -0.14
POLE-222	ENST00000545015	ARSA	P15289	507 aa		14.18	□□□□□ -0.14
POLE-222	ENST00000545015	MAP3K7CL	P57077	242 aa		14.18	□□□□□ -0.14

Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms