RNA–Protein interactions for RNA: ENST00000544967.5

USP28-213, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 1 (best) BASIC

Gene USP28, Length 3,498 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-213ENST00000544967 MSCO60682 206 aa5.5□□□□□ -1.53
USP28-213ENST00000544967 TBX10O75333 385 aa5.5□□□□□ -1.53
USP28-213ENST00000544967 ZBED1O96006 694 aa5.5□□□□□ -1.53
USP28-213ENST00000544967 KRT18P05783 430 aaKnown RBP5.5□□□□□ -1.53
USP28-213ENST00000544967 PLCG1P19174 1290 aa5.5□□□□□ -1.53
USP28-213ENST00000544967 ADARP55265 1226 aaKnown RBP5.5□□□□□ -1.53
USP28-213ENST00000544967 HYIQ5T013 277 aa5.5□□□□□ -1.53
USP28-213ENST00000544967 CENPUQ71F23 418 aa5.5□□□□□ -1.53
USP28-213ENST00000544967 KRT25Q7Z3Z0 450 aa5.5□□□□□ -1.53
USP28-213ENST00000544967 CLNKQ7Z7G1 428 aa5.5□□□□□ -1.53
USP28-213ENST00000544967 VSIG10LQ86VR7 867 aa5.5□□□□□ -1.53
USP28-213ENST00000544967 PDSS2Q86YH6 399 aa5.5□□□□□ -1.53
USP28-213ENST00000544967 MARVELD2Q8N4S9 558 aa5.5□□□□□ -1.53
USP28-213ENST00000544967 UBL4BQ8N7F7 174 aa5.5□□□□□ -1.53
USP28-213ENST00000544967 TTC8Q8TAM2 541 aa5.5□□□□□ -1.53
USP28-213ENST00000544967 TRIM51Q9BSJ1 452 aa5.5□□□□□ -1.53
USP28-213ENST00000544967 SYT11Q9BT88 431 aa5.5□□□□□ -1.53
USP28-213ENST00000544967 WNT8AQ9H1J5 351 aa5.5□□□□□ -1.53
USP28-213ENST00000544967 RAVER2Q9HCJ3 691 aaKnown RBP5.5□□□□□ -1.53
USP28-213ENST00000544967 HAO1Q9UJM8 370 aa5.5□□□□□ -1.53
USP28-213ENST00000544967 TRIM33Q9UPN9 1127 aa5.5□□□□□ -1.53
USP28-213ENST00000544967 MAPK8IP1Q9UQF2 711 aa5.5□□□□□ -1.53
USP28-213ENST00000544967 NUMBLQ9Y6R0 609 aa5.5□□□□□ -1.53
USP28-213ENST00000544967 RALGAPA2Q2PPJ7 1873 aa5.5□□□□□ -1.53
USP28-213ENST00000544967 IGKV6D-21A0A0A0MT36 114 aa5.5□□□□□ -1.53
USP28-213ENST00000544967 DENRO43583 198 aaKnown RBP5.5□□□□□ -1.53
USP28-213ENST00000544967 ADAMTS4O75173 837 aa5.5□□□□□ -1.53
USP28-213ENST00000544967 OR52Z1P0C646 297 aa5.5□□□□□ -1.53
USP28-213ENST00000544967 UQCRBP14927 111 aa5.5□□□□□ -1.53
USP28-213ENST00000544967 RPL21P46778 160 aaKnown RBP5.5□□□□□ -1.53
USP28-213ENST00000544967 IFNAR2P48551 515 aa5.5□□□□□ -1.53
USP28-213ENST00000544967 GJA9P57773 515 aa5.5□□□□□ -1.53
USP28-213ENST00000544967 PGM5Q15124 567 aa5.5□□□□□ -1.53
USP28-213ENST00000544967 PIK3AP1Q6ZUJ8 805 aa5.5□□□□□ -1.53
USP28-213ENST00000544967 ZNF571Q7Z3V5 609 aaPredicted RBP5.5□□□□□ -1.53
USP28-213ENST00000544967 MYOCDQ8IZQ8 938 aa5.5□□□□□ -1.53
USP28-213ENST00000544967 ARL6IP6Q8N6S5 226 aa5.5□□□□□ -1.53
USP28-213ENST00000544967 GRK7Q8WTQ7 553 aa5.5□□□□□ -1.53
USP28-213ENST00000544967 GAB3Q8WWW8 586 aa5.5□□□□□ -1.53
USP28-213ENST00000544967 ALKBH8Q96BT7 664 aaKnown RBP5.5□□□□□ -1.53
USP28-213ENST00000544967 OSBPL8Q9BZF1 889 aa5.5□□□□□ -1.53
USP28-213ENST00000544967 CDC42EP4Q9H3Q1 356 aaKnown RBP5.5□□□□□ -1.53
USP28-213ENST00000544967 ZNF696Q9H7X3 374 aa5.5□□□□□ -1.53
USP28-213ENST00000544967 LRRC4CQ9HCJ2 640 aa5.5□□□□□ -1.53
USP28-213ENST00000544967 TELO2Q9Y4R8 837 aa5.5□□□□□ -1.53
USP28-213ENST00000544967 PTCH2Q9Y6C5 1203 aa5.5□□□□□ -1.53
USP28-213ENST00000544967 IKBKGQ9Y6K9 419 aa5.5□□□□□ -1.53
USP28-213ENST00000544967 PDCD11Q14690 1871 aaKnown RBP5.5□□□□□ -1.53
USP28-213ENST00000544967 SH3PXD2BA1X283 911 aa5.5□□□□□ -1.53
USP28-213ENST00000544967 SPATA31C2B4DYI2 1134 aa5.5□□□□□ -1.53
USP28-213ENST00000544967 ENTPD5O75356 428 aa5.5□□□□□ -1.53
USP28-213ENST00000544967 RARBP10826 455 aa5.5□□□□□ -1.53
USP28-213ENST00000544967 TARSP26639 723 aaKnown RBP5.5□□□□□ -1.53
USP28-213ENST00000544967 GTF2H1P32780 548 aa5.5□□□□□ -1.53
USP28-213ENST00000544967 MCM7P33993 719 aa5.5□□□□□ -1.53
USP28-213ENST00000544967 SLC16A2P36021 539 aa5.5□□□□□ -1.53
USP28-213ENST00000544967 MLH1P40692 756 aa5.5□□□□□ -1.53
USP28-213ENST00000544967 FLT3LGP49771 235 aa5.5□□□□□ -1.53
USP28-213ENST00000544967 NUBP1P53384 320 aa5.5□□□□□ -1.53
USP28-213ENST00000544967 PLTPP55058 493 aa5.5□□□□□ -1.53
USP28-213ENST00000544967 ACTR3P61158 418 aa5.5□□□□□ -1.53
USP28-213ENST00000544967 POLR2FP61218 127 aaKnown RBP5.5□□□□□ -1.53
USP28-213ENST00000544967 PTK2Q05397 1052 aa5.5□□□□□ -1.53
USP28-213ENST00000544967 CALCOCO2Q13137 446 aa5.5□□□□□ -1.53
USP28-213ENST00000544967 PTK6Q13882 451 aa5.5□□□□□ -1.53
USP28-213ENST00000544967 CCDC153Q494R4 210 aa5.5□□□□□ -1.53
USP28-213ENST00000544967 TMEM119Q4V9L6 283 aa5.5□□□□□ -1.53
USP28-213ENST00000544967 CFAP157Q5JU67 520 aa5.5□□□□□ -1.53
USP28-213ENST00000544967 RWDD4Q6NW29 188 aaKnown RBP5.5□□□□□ -1.53
USP28-213ENST00000544967 TMPRSS6Q8IU80 811 aa5.5□□□□□ -1.53
USP28-213ENST00000544967 MAML1Q92585 1016 aa5.5□□□□□ -1.53
USP28-213ENST00000544967 SKA1Q96BD8 255 aa5.5□□□□□ -1.53
USP28-213ENST00000544967 GPRASP2Q96D09 838 aa5.5□□□□□ -1.53
USP28-213ENST00000544967 MIPEPQ99797 713 aa5.5□□□□□ -1.53
USP28-213ENST00000544967 BEGAINQ9BUH8 593 aa5.5□□□□□ -1.53
USP28-213ENST00000544967 MFRPQ9BY79 579 aa5.5□□□□□ -1.53
USP28-213ENST00000544967 SLC7A5P2Q9GIP4 190 aa5.5□□□□□ -1.53
USP28-213ENST00000544967 MCOLN1Q9GZU1 580 aa5.5□□□□□ -1.53
USP28-213ENST00000544967 GPCPD1Q9NPB8 672 aa5.5□□□□□ -1.53
USP28-213ENST00000544967 GIN1Q9NXP7 522 aa5.5□□□□□ -1.53
USP28-213ENST00000544967 ADAMTS1Q9UHI8 967 aa5.5□□□□□ -1.53
USP28-213ENST00000544967 PRKAB1Q9Y478 270 aa5.5□□□□□ -1.53
USP28-213ENST00000544967 BUD23O43709 281 aaKnown RBP5.49□□□□□ -1.53
USP28-213ENST00000544967 CLASP2O75122 1294 aaKnown RBP5.49□□□□□ -1.53
USP28-213ENST00000544967 BAIAP3O94812 1187 aa5.49□□□□□ -1.53
USP28-213ENST00000544967 HAUS5O94927 633 aa5.49□□□□□ -1.53
USP28-213ENST00000544967 GOLGA8HP0CJ92 632 aa5.49□□□□□ -1.53
USP28-213ENST00000544967 MYCLP1P12525 358 aaPredicted RBP5.49□□□□□ -1.53
USP28-213ENST00000544967 ANPEPP15144 967 aa5.49□□□□□ -1.53
USP28-213ENST00000544967 TSHRP16473 764 aa5.49□□□□□ -1.53
USP28-213ENST00000544967 COILP38432 576 aaPredicted RBP5.49□□□□□ -1.53
USP28-213ENST00000544967 RPS6P62753 249 aaKnown RBP5.49□□□□□ -1.53
USP28-213ENST00000544967 ZYXQ15942 572 aaKnown RBP5.49□□□□□ -1.53
USP28-213ENST00000544967 NFE2Q16621 373 aaPredicted RBP5.49□□□□□ -1.53
USP28-213ENST00000544967 NLRP9Q7RTR0 991 aa5.49□□□□□ -1.53
USP28-213ENST00000544967 AHI1Q8N157 1196 aa5.49□□□□□ -1.53
USP28-213ENST00000544967 SCAIQ8N9R8 606 aa5.49□□□□□ -1.53
USP28-213ENST00000544967 FNBP1Q96RU3 617 aa5.49□□□□□ -1.53
USP28-213ENST00000544967 PDCD2LQ9BRP1 358 aa5.49□□□□□ -1.53
USP28-213ENST00000544967 SIKE1Q9BRV8 207 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms