RNA–Protein interactions for RNA: ENST00000544964.6

ACTN1-206, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 891 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-206ENST00000544964 HOXC13P31276 330 aa13.29□□□□□ -0.28
ACTN1-206ENST00000544964 PIK3CAP42336 1068 aa13.29□□□□□ -0.28
ACTN1-206ENST00000544964 CXCL12P48061 93 aa13.29□□□□□ -0.28
ACTN1-206ENST00000544964 FMO5P49326 533 aa13.29□□□□□ -0.28
ACTN1-206ENST00000544964 SMARCB1Q12824 385 aa13.29□□□□□ -0.28
ACTN1-206ENST00000544964 NCOA4Q13772 614 aa13.29□□□□□ -0.28
ACTN1-206ENST00000544964 LRRC32Q14392 662 aa13.29□□□□□ -0.28
ACTN1-206ENST00000544964 PON2Q15165 354 aa13.29□□□□□ -0.28
ACTN1-206ENST00000544964 LPAL2Q16609 132 aa13.29□□□□□ -0.28
ACTN1-206ENST00000544964 MAN2A1Q16706 1144 aa13.29□□□□□ -0.28
ACTN1-206ENST00000544964 METTL23Q86XA0 190 aa13.29□□□□□ -0.28
ACTN1-206ENST00000544964 LRRC52Q8N7C0 313 aa13.29□□□□□ -0.28
ACTN1-206ENST00000544964 RNF214Q8ND24 703 aa13.29□□□□□ -0.28
ACTN1-206ENST00000544964 SEMA4DQ92854 862 aa13.29□□□□□ -0.28
ACTN1-206ENST00000544964 HPDLQ96IR7 371 aa13.29□□□□□ -0.28
ACTN1-206ENST00000544964 PI4K2AQ9BTU6 479 aa13.29□□□□□ -0.28
ACTN1-206ENST00000544964 CCL26Q9Y258 94 aa13.29□□□□□ -0.28
ACTN1-206ENST00000544964 MAP1BP46821 2468 aaKnown RBP13.29□□□□□ -0.28
ACTN1-206ENST00000544964 OTOL1A6NHN0 477 aaPredicted RBP13.28□□□□□ -0.28
ACTN1-206ENST00000544964 PES1O00541 588 aaKnown RBP13.28□□□□□ -0.28
ACTN1-206ENST00000544964 DPYSL4O14531 572 aa13.28□□□□□ -0.28
ACTN1-206ENST00000544964 HCRTO43612 131 aa13.28□□□□□ -0.28
ACTN1-206ENST00000544964 F11P03951 625 aa13.28□□□□□ -0.28
ACTN1-206ENST00000544964 PNPLA4P41247 253 aa13.28□□□□□ -0.28
ACTN1-206ENST00000544964 NRLP54845 237 aa13.28□□□□□ -0.28
ACTN1-206ENST00000544964 PLCB2Q00722 1185 aa13.28□□□□□ -0.28
ACTN1-206ENST00000544964 MYL7Q01449 175 aa13.28□□□□□ -0.28
ACTN1-206ENST00000544964 MYO1EQ12965 1108 aa13.28□□□□□ -0.28
ACTN1-206ENST00000544964 SRSF5Q13243 272 aaKnown RBP13.28□□□□□ -0.28
ACTN1-206ENST00000544964 PPP2R5DQ14738 602 aa13.28□□□□□ -0.28
ACTN1-206ENST00000544964 KRT31Q15323 416 aa13.28□□□□□ -0.28
ACTN1-206ENST00000544964 VWA3BQ502W6 1294 aa13.28□□□□□ -0.28
ACTN1-206ENST00000544964 SPOPLQ6IQ16 392 aa13.28□□□□□ -0.28
ACTN1-206ENST00000544964 CMTM8Q8IZV2 173 aa13.28□□□□□ -0.28
ACTN1-206ENST00000544964 THEM5Q8N1Q8 247 aa13.28□□□□□ -0.28
ACTN1-206ENST00000544964 GCNAQ96QF7 691 aa13.28□□□□□ -0.28
ACTN1-206ENST00000544964 VPS16Q9H269 839 aa13.28□□□□□ -0.28
ACTN1-206ENST00000544964 HPS4Q9NQG7 708 aa13.28□□□□□ -0.28
ACTN1-206ENST00000544964 PCDHB5Q9Y5E4 795 aa13.28□□□□□ -0.28
ACTN1-206ENST00000544964 CHURC1-FNTBB4DL54 471 aa13.27□□□□□ -0.29
ACTN1-206ENST00000544964 GOLGA6L19H0YKK7 550 aa13.27□□□□□ -0.29
ACTN1-206ENST00000544964 HRO43593 1189 aa13.27□□□□□ -0.29
ACTN1-206ENST00000544964 ACAT1P24752 427 aaKnown RBP13.27□□□□□ -0.29
ACTN1-206ENST00000544964 FNTBP49356 437 aa13.27□□□□□ -0.29
ACTN1-206ENST00000544964 COPB1P53618 953 aaKnown RBP13.27□□□□□ -0.29
ACTN1-206ENST00000544964 TPM4P67936 248 aa13.27□□□□□ -0.29
ACTN1-206ENST00000544964 TSPY1Q01534 308 aa13.27□□□□□ -0.29
ACTN1-206ENST00000544964 LMNB2Q03252 620 aa13.27□□□□□ -0.29
ACTN1-206ENST00000544964 ZNF699Q32M78 642 aa13.27□□□□□ -0.29
ACTN1-206ENST00000544964 INTS6LQ5JSJ4 861 aaKnown RBP13.27□□□□□ -0.29
ACTN1-206ENST00000544964 MIIPQ5JXC2 388 aa13.27□□□□□ -0.29
ACTN1-206ENST00000544964 DGKKQ5KSL6 1271 aa13.27□□□□□ -0.29
ACTN1-206ENST00000544964 SDHAF4Q5VUM1 108 aa13.27□□□□□ -0.29
ACTN1-206ENST00000544964 LAIR1Q6GTX8 287 aa13.27□□□□□ -0.29
ACTN1-206ENST00000544964 PKN3Q6P5Z2 889 aa13.27□□□□□ -0.29
ACTN1-206ENST00000544964 OSTM1Q86WC4 334 aa13.27□□□□□ -0.29
ACTN1-206ENST00000544964 DCP1BQ8IZD4 617 aaKnown RBP13.27□□□□□ -0.29
ACTN1-206ENST00000544964 GPR161Q8N6U8 529 aaKnown RBP13.27□□□□□ -0.29
ACTN1-206ENST00000544964 CELF5Q8N6W0 485 aaKnown RBP13.27□□□□□ -0.29
ACTN1-206ENST00000544964 FBXL13Q8NEE6 735 aa13.27□□□□□ -0.29
ACTN1-206ENST00000544964 ANKRD20A12PQ8NF67 263 aa13.27□□□□□ -0.29
ACTN1-206ENST00000544964 USP13Q92995 863 aaPredicted RBP13.27□□□□□ -0.29
ACTN1-206ENST00000544964 SECISBP2LQ93073 1101 aaKnown RBP13.27□□□□□ -0.29
ACTN1-206ENST00000544964 FAM83CQ9BQN1 747 aa13.27□□□□□ -0.29
ACTN1-206ENST00000544964 XYLT2Q9H1B5 865 aa13.27□□□□□ -0.29
ACTN1-206ENST00000544964 NDST4Q9H3R1 872 aa13.27□□□□□ -0.29
ACTN1-206ENST00000544964 GDAP2Q9NXN4 497 aa13.27□□□□□ -0.29
ACTN1-206ENST00000544964 NXF1Q9UBU9 619 aaKnown RBP13.27□□□□□ -0.29
ACTN1-206ENST00000544964 LIMA1Q9UHB6 759 aaKnown RBP13.27□□□□□ -0.29
ACTN1-206ENST00000544964 GMEB2Q9UKD1 530 aa13.27□□□□□ -0.29
ACTN1-206ENST00000544964 SNX9Q9Y5X1 595 aa13.27□□□□□ -0.29
ACTN1-206ENST00000544964 KMT2BQ9UMN6 2715 aaPredicted RBP13.27□□□□□ -0.29
ACTN1-206ENST00000544964 NOL4O94818 638 aa13.26□□□□□ -0.29
ACTN1-206ENST00000544964 ATICP31939 592 aa13.26□□□□□ -0.29
ACTN1-206ENST00000544964 SPEM2Q0P670 501 aa13.26□□□□□ -0.29
ACTN1-206ENST00000544964 LRMPQ12912 555 aa13.26□□□□□ -0.29
ACTN1-206ENST00000544964 SGSM1Q2NKQ1 1148 aa13.26□□□□□ -0.29
ACTN1-206ENST00000544964 ITPRIPL2Q3MIP1 535 aa13.26□□□□□ -0.29
ACTN1-206ENST00000544964 WDR72Q3MJ13 1102 aa13.26□□□□□ -0.29
ACTN1-206ENST00000544964 TXNDC8Q6A555 127 aa13.26□□□□□ -0.29
ACTN1-206ENST00000544964 TRIM68Q6AZZ1 485 aa13.26□□□□□ -0.29
ACTN1-206ENST00000544964 APTXQ7Z2E3 356 aaKnown RBP13.26□□□□□ -0.29
ACTN1-206ENST00000544964 GAS2L3Q86XJ1 694 aa13.26□□□□□ -0.29
ACTN1-206ENST00000544964 MAB21L3Q8N8X9 362 aa13.26□□□□□ -0.29
ACTN1-206ENST00000544964 ACBD6Q9BR61 282 aa13.26□□□□□ -0.29
ACTN1-206ENST00000544964 CRACR2AQ9BSW2 395 aa13.26□□□□□ -0.29
ACTN1-206ENST00000544964 APOBEC3GQ9HC16 384 aaKnown RBP13.26□□□□□ -0.29
ACTN1-206ENST00000544964 ABCB6Q9NP58 842 aa13.26□□□□□ -0.29
ACTN1-206ENST00000544964 RAB20Q9NX57 234 aa13.26□□□□□ -0.29
ACTN1-206ENST00000544964 DDX43Q9NXZ2 648 aaKnown RBP13.26□□□□□ -0.29
ACTN1-206ENST00000544964 ZMYM5Q9UJ78 669 aa13.26□□□□□ -0.29
ACTN1-206ENST00000544964 USP18Q9UMW8 372 aa13.26□□□□□ -0.29
ACTN1-206ENST00000544964 COQ4Q9Y3A0 265 aa13.26□□□□□ -0.29
ACTN1-206ENST00000544964 LAMA1P25391 3075 aa13.25□□□□□ -0.29
ACTN1-206ENST00000544964 CEP295Q9C0D2 2601 aa13.25□□□□□ -0.29
ACTN1-206ENST00000544964 GABRDO14764 452 aa13.25□□□□□ -0.29
ACTN1-206ENST00000544964 STAU1O95793 577 aaKnown RBP13.25□□□□□ -0.29
ACTN1-206ENST00000544964 ASS1P00966 412 aaKnown RBP13.25□□□□□ -0.29
ACTN1-206ENST00000544964 RETP07949 1114 aa13.25□□□□□ -0.29
ACTN1-206ENST00000544964 TPM2P07951 284 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms