RNA–Protein interactions for RNA: ENST00000543872.6

SMG8-202, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMG8, Length 3,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-202ENST00000543872 CPOXP36551 454 aa13.19□□□□□ -0.3
SMG8-202ENST00000543872 BMPR2Q13873 1038 aa13.19□□□□□ -0.3
SMG8-202ENST00000543872 PDK1Q15118 436 aa13.19□□□□□ -0.3
SMG8-202ENST00000543872 ZNF362Q5T0B9 420 aaPredicted RBP13.19□□□□□ -0.3
SMG8-202ENST00000543872 C6orf52Q5T4I8 152 aa13.19□□□□□ -0.3
SMG8-202ENST00000543872 ATG16L1Q676U5 607 aa13.19□□□□□ -0.3
SMG8-202ENST00000543872 ADGRG6Q86SQ4 1221 aa13.19□□□□□ -0.3
SMG8-202ENST00000543872 LARGE2Q8N3Y3 721 aa13.19□□□□□ -0.3
SMG8-202ENST00000543872 EXD1Q8NHP7 514 aa13.19□□□□□ -0.3
SMG8-202ENST00000543872 CFAP36Q96G28 342 aa13.19□□□□□ -0.3
SMG8-202ENST00000543872 HSD17B14Q9BPX1 270 aa13.19□□□□□ -0.3
SMG8-202ENST00000543872 PPCSQ9HAB8 311 aa13.19□□□□□ -0.3
SMG8-202ENST00000543872 WRAP73Q9P2S5 460 aaPredicted RBP13.19□□□□□ -0.3
SMG8-202ENST00000543872 ZBTB21Q9ULJ3 1066 aa13.19□□□□□ -0.3
SMG8-202ENST00000543872 SHOC2Q9UQ13 582 aa13.19□□□□□ -0.3
SMG8-202ENST00000543872 POMPQ9Y244 141 aa13.19□□□□□ -0.3
SMG8-202ENST00000543872 AP4B1Q9Y6B7 739 aa13.19□□□□□ -0.3
SMG8-202ENST00000543872 HTR3EA5X5Y0 456 aa13.19□□□□□ -0.3
SMG8-202ENST00000543872 DNAJA2O60884 412 aa13.19□□□□□ -0.3
SMG8-202ENST00000543872 DHRS4L1P0CG22 281 aa13.19□□□□□ -0.3
SMG8-202ENST00000543872 CLCN2P51788 898 aa13.19□□□□□ -0.3
SMG8-202ENST00000543872 VCPP55072 806 aaKnown RBP13.19□□□□□ -0.3
SMG8-202ENST00000543872 GPSM2P81274 684 aa13.19□□□□□ -0.3
SMG8-202ENST00000543872 LIN9Q5TKA1 542 aa13.19□□□□□ -0.3
SMG8-202ENST00000543872 CES4AQ5XG92 561 aa13.19□□□□□ -0.3
SMG8-202ENST00000543872 IGDCC3Q8IVU1 814 aa13.19□□□□□ -0.3
SMG8-202ENST00000543872 PDIK1LQ8N165 341 aa13.19□□□□□ -0.3
SMG8-202ENST00000543872 TRIML2Q8N7C3 387 aa13.19□□□□□ -0.3
SMG8-202ENST00000543872 FNDC8Q8TC99 324 aa13.19□□□□□ -0.3
SMG8-202ENST00000543872 HELQQ8TDG4 1101 aa13.19□□□□□ -0.3
SMG8-202ENST00000543872 GIPC3Q8TF64 312 aa13.19□□□□□ -0.3
SMG8-202ENST00000543872 C20orf27Q9GZN8 174 aa13.19□□□□□ -0.3
SMG8-202ENST00000543872 NYXQ9GZU5 481 aa13.19□□□□□ -0.3
SMG8-202ENST00000543872 Q9H521 79 aa13.19□□□□□ -0.3
SMG8-202ENST00000543872 ZNF142P52746 1687 aaPredicted RBP13.19□□□□□ -0.3
SMG8-202ENST00000543872 STAMBPO95630 424 aa13.18□□□□□ -0.3
SMG8-202ENST00000543872 PDGFRBP09619 1106 aa13.18□□□□□ -0.3
SMG8-202ENST00000543872 NFKBIAP25963 317 aa13.18□□□□□ -0.3
SMG8-202ENST00000543872 CIITAP33076 1130 aa13.18□□□□□ -0.3
SMG8-202ENST00000543872 COPAP53621 1224 aa13.18□□□□□ -0.3
SMG8-202ENST00000543872 SLC15A2Q16348 729 aa13.18□□□□□ -0.3
SMG8-202ENST00000543872 CIAPIN1Q6FI81 312 aa13.18□□□□□ -0.3
SMG8-202ENST00000543872 KATNAL2Q8IYT4 538 aa13.18□□□□□ -0.3
SMG8-202ENST00000543872 TTC13Q8NBP0 860 aa13.18□□□□□ -0.3
SMG8-202ENST00000543872 SENP6Q9GZR1 1112 aaPredicted RBP13.18□□□□□ -0.3
SMG8-202ENST00000543872 HOMER2Q9NSB8 354 aa13.18□□□□□ -0.3
SMG8-202ENST00000543872 SEL1LQ9UBV2 794 aa13.18□□□□□ -0.3
SMG8-202ENST00000543872 IVNS1ABPQ9Y6Y0 642 aa13.18□□□□□ -0.3
SMG8-202ENST00000543872 TBX3O15119 743 aa13.18□□□□□ -0.3
SMG8-202ENST00000543872 P4HA2O15460 535 aa13.18□□□□□ -0.3
SMG8-202ENST00000543872 PSTPIP1O43586 416 aa13.18□□□□□ -0.3
SMG8-202ENST00000543872 CRTAMO95727 393 aa13.18□□□□□ -0.3
SMG8-202ENST00000543872 WEE2P0C1S8 567 aa13.18□□□□□ -0.3
SMG8-202ENST00000543872 ELK3P41970 407 aa13.18□□□□□ -0.3
SMG8-202ENST00000543872 GDF10P55107 478 aa13.18□□□□□ -0.3
SMG8-202ENST00000543872 HDAC4P56524 1084 aa13.18□□□□□ -0.3
SMG8-202ENST00000543872 ITPK1Q13572 414 aa13.18□□□□□ -0.3
SMG8-202ENST00000543872 TXNRD3NBQ6F5E7 133 aa13.18□□□□□ -0.3
SMG8-202ENST00000543872 PATL1Q86TB9 770 aaKnown RBP13.18□□□□□ -0.3
SMG8-202ENST00000543872 NUP93Q8N1F7 819 aa13.18□□□□□ -0.3
SMG8-202ENST00000543872 CPT1BQ92523 772 aa13.18□□□□□ -0.3
SMG8-202ENST00000543872 ERLEC1Q96DZ1 483 aa13.18□□□□□ -0.3
SMG8-202ENST00000543872 MBOAT7Q96N66 472 aa13.18□□□□□ -0.3
SMG8-202ENST00000543872 WDR83Q9BRX9 315 aaKnown RBP13.18□□□□□ -0.3
SMG8-202ENST00000543872 TRIM56Q9BRZ2 755 aaKnown RBP13.18□□□□□ -0.3
SMG8-202ENST00000543872 TUT1Q9H6E5 874 aaKnown RBP13.18□□□□□ -0.3
SMG8-202ENST00000543872 XPO7Q9UIA9 1087 aaKnown RBP13.18□□□□□ -0.3
SMG8-202ENST00000543872 CDH22Q9UJ99 828 aa13.18□□□□□ -0.3
SMG8-202ENST00000543872 H0YIN7 160 aa13.18□□□□□ -0.3
SMG8-202ENST00000543872 TBC1D12O60347 775 aa13.18□□□□□ -0.3
SMG8-202ENST00000543872 GAS7O60861 476 aa13.18□□□□□ -0.3
SMG8-202ENST00000543872 LYPLA1O75608 230 aaPredicted RBP13.18□□□□□ -0.3
SMG8-202ENST00000543872 RPL7AP62424 266 aaKnown RBP13.18□□□□□ -0.3
SMG8-202ENST00000543872 PDE1CQ14123 709 aaPredicted RBP13.18□□□□□ -0.3
SMG8-202ENST00000543872 PPP6R3Q5H9R7 873 aaPredicted RBP13.18□□□□□ -0.3
SMG8-202ENST00000543872 LMBRD2Q68DH5 695 aaPredicted RBP13.18□□□□□ -0.3
SMG8-202ENST00000543872 C14orf80Q86SX3 495 aa13.18□□□□□ -0.3
SMG8-202ENST00000543872 RSAD2Q8WXG1 361 aa13.18□□□□□ -0.3
SMG8-202ENST00000543872 TMIGD2Q96BF3 282 aa13.18□□□□□ -0.3
SMG8-202ENST00000543872 LRGUKQ96M69 825 aa13.18□□□□□ -0.3
SMG8-202ENST00000543872 IPO5O00410 1097 aaKnown RBP13.17□□□□□ -0.3
SMG8-202ENST00000543872 TOP3BO95985 862 aaKnown RBP13.17□□□□□ -0.3
SMG8-202ENST00000543872 CYP3A4P08684 503 aa13.17□□□□□ -0.3
SMG8-202ENST00000543872 ENTPD1P49961 510 aa13.17□□□□□ -0.3
SMG8-202ENST00000543872 MYBPC1Q00872 1141 aa13.17□□□□□ -0.3
SMG8-202ENST00000543872 SNAPC2Q13487 334 aa13.17□□□□□ -0.3
SMG8-202ENST00000543872 KRT39Q6A163 491 aa13.17□□□□□ -0.3
SMG8-202ENST00000543872 NACC1Q96RE7 527 aa13.17□□□□□ -0.3
SMG8-202ENST00000543872 GLT8D2Q9H1C3 349 aa13.17□□□□□ -0.3
SMG8-202ENST00000543872 ANLNQ9NQW6 1124 aa13.17□□□□□ -0.3
SMG8-202ENST00000543872 XPNPEP1Q9NQW7 623 aa13.17□□□□□ -0.3
SMG8-202ENST00000543872 SPATA31A5Q5VU36 1347 aa13.17□□□□□ -0.3
SMG8-202ENST00000543872 SPATA31A6Q5VVP1 1343 aa13.17□□□□□ -0.3
SMG8-202ENST00000543872 SPATA31A7Q8IWB4 1347 aa13.17□□□□□ -0.3
SMG8-202ENST00000543872 LDHAP00338 332 aaKnown RBP13.17□□□□□ -0.3
SMG8-202ENST00000543872 SERPINA6P08185 405 aa13.17□□□□□ -0.3
SMG8-202ENST00000543872 UNGP13051 313 aaPredicted RBP13.17□□□□□ -0.3
SMG8-202ENST00000543872 DSG3P32926 999 aa13.17□□□□□ -0.3
SMG8-202ENST00000543872 STX3Q13277 289 aa13.17□□□□□ -0.3
SMG8-202ENST00000543872 OASLQ15646 514 aaKnown RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms