RNA–Protein interactions for RNA: ENST00000543473.1

SUDS3-204, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUDS3, Length 4,897 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-204ENST00000543473 KCNA1Q09470 495 aa20.07■□□□□ 0.8
SUDS3-204ENST00000543473 PDK1Q15118 436 aa20.07■□□□□ 0.8
SUDS3-204ENST00000543473 UBA3Q8TBC4 463 aa20.07■□□□□ 0.8
SUDS3-204ENST00000543473 EPAS1Q99814 870 aa20.07■□□□□ 0.8
SUDS3-204ENST00000543473 C17orf75Q9HAS0 396 aa20.07■□□□□ 0.8
SUDS3-204ENST00000543473 ACTL7BQ9Y614 415 aa20.07■□□□□ 0.8
SUDS3-204ENST00000543473 TRPC5OSA6NMA1 111 aa20.06■□□□□ 0.8
SUDS3-204ENST00000543473 CYTH3O43739 400 aa20.06■□□□□ 0.8
SUDS3-204ENST00000543473 TFE3P19532 575 aaPredicted RBP20.06■□□□□ 0.8
SUDS3-204ENST00000543473 SULT1E1P49888 294 aa20.06■□□□□ 0.8
SUDS3-204ENST00000543473 POU5F2Q8N7G0 328 aa20.06■□□□□ 0.8
SUDS3-204ENST00000543473 APOPT1Q96IL0 206 aa20.06■□□□□ 0.8
SUDS3-204ENST00000543473 GANQ9H2C0 597 aa20.06■□□□□ 0.8
SUDS3-204ENST00000543473 BTBD7Q9P203 1132 aa20.06■□□□□ 0.8
SUDS3-204ENST00000543473 TXNP10599 105 aaKnown RBP20.06■□□□□ 0.8
SUDS3-204ENST00000543473 FLT3P36888 993 aa20.06■□□□□ 0.8
SUDS3-204ENST00000543473 ELK3P41970 407 aa20.06■□□□□ 0.8
SUDS3-204ENST00000543473 RIPK1Q13546 671 aa20.06■□□□□ 0.8
SUDS3-204ENST00000543473 TMC2Q8TDI7 906 aa20.06■□□□□ 0.8
SUDS3-204ENST00000543473 SGF29Q96ES7 293 aa20.06■□□□□ 0.8
SUDS3-204ENST00000543473 WNK4Q96J92 1243 aa20.06■□□□□ 0.8
SUDS3-204ENST00000543473 ARHGEF38Q9NXL2 777 aa20.06■□□□□ 0.8
SUDS3-204ENST00000543473 DFFAO00273 331 aa20.06■□□□□ 0.8
SUDS3-204ENST00000543473 ZNF263O14978 683 aa20.06■□□□□ 0.8
SUDS3-204ENST00000543473 APOA4P06727 396 aa20.06■□□□□ 0.8
SUDS3-204ENST00000543473 LACTB2Q53H82 288 aaPredicted RBP20.06■□□□□ 0.8
SUDS3-204ENST00000543473 ETNPPLQ8TBG4 499 aa20.06■□□□□ 0.8
SUDS3-204ENST00000543473 NSMCE4AQ9NXX6 385 aa20.06■□□□□ 0.8
SUDS3-204ENST00000543473 HOXA10P31260 410 aaPredicted RBP20.05■□□□□ 0.8
SUDS3-204ENST00000543473 HSD17B4P51659 736 aa20.05■□□□□ 0.8
SUDS3-204ENST00000543473 RBP5P82980 135 aa20.05■□□□□ 0.8
SUDS3-204ENST00000543473 AASDHQ4L235 1098 aaPredicted RBP20.05■□□□□ 0.8
SUDS3-204ENST00000543473 ZCCHC9Q8N567 271 aaKnown RBP20.05■□□□□ 0.8
SUDS3-204ENST00000543473 LZICQ8WZA0 190 aa20.05■□□□□ 0.8
SUDS3-204ENST00000543473 HES6Q96HZ4 224 aa20.05■□□□□ 0.8
SUDS3-204ENST00000543473 SRPK1Q96SB4 655 aaKnown RBP20.05■□□□□ 0.8
SUDS3-204ENST00000543473 RUBCNLQ9H714 662 aa20.05■□□□□ 0.8
SUDS3-204ENST00000543473 CAMSAP3Q9P1Y5 1249 aaPredicted RBP20.05■□□□□ 0.8
SUDS3-204ENST00000543473 ASB14A6NK59 587 aa20.05■□□□□ 0.8
SUDS3-204ENST00000543473 KRT75O95678 551 aa20.05■□□□□ 0.8
SUDS3-204ENST00000543473 PTGER2P43116 358 aa20.05■□□□□ 0.8
SUDS3-204ENST00000543473 KCTD19Q17RG1 926 aaPredicted RBP20.05■□□□□ 0.8
SUDS3-204ENST00000543473 Q4G0T1 1027 aa20.05■□□□□ 0.8
SUDS3-204ENST00000543473 TCHHL1Q5QJ38 904 aaPredicted RBP20.05■□□□□ 0.8
SUDS3-204ENST00000543473 LPCAT2Q7L5N7 544 aa20.05■□□□□ 0.8
SUDS3-204ENST00000543473 TAS2R14Q9NYV8 317 aa20.05■□□□□ 0.8
SUDS3-204ENST00000543473 USP6NLQ92738 828 aa20.05■□□□□ 0.8
SUDS3-204ENST00000543473 DNM1LO00429 736 aa20.05■□□□□ 0.8
SUDS3-204ENST00000543473 OR9Q1Q8NGQ5 310 aa20.05■□□□□ 0.8
SUDS3-204ENST00000543473 TSPAN17Q96FV3 270 aa20.05■□□□□ 0.8
SUDS3-204ENST00000543473 OSBPL7Q9BZF2 842 aa20.05■□□□□ 0.8
SUDS3-204ENST00000543473 TYW5A2RUC4 315 aaKnown RBP20.04■□□□□ 0.8
SUDS3-204ENST00000543473 MEI4A8MW99 385 aa20.04■□□□□ 0.8
SUDS3-204ENST00000543473 TNFAIP8O95379 198 aa20.04■□□□□ 0.8
SUDS3-204ENST00000543473 CBWD6Q4V339 395 aa20.04■□□□□ 0.8
SUDS3-204ENST00000543473 CBWD3Q5JTY5 395 aa20.04■□□□□ 0.8
SUDS3-204ENST00000543473 CBWD5Q5RIA9 395 aa20.04■□□□□ 0.8
SUDS3-204ENST00000543473 SEL1L3Q68CR1 1132 aa20.04■□□□□ 0.8
SUDS3-204ENST00000543473 MTMR9Q96QG7 549 aa20.04■□□□□ 0.8
SUDS3-204ENST00000543473 DNPEPQ9ULA0 475 aa20.04■□□□□ 0.8
SUDS3-204ENST00000543473 E5RI56 91 aa20.04■□□□□ 0.8
SUDS3-204ENST00000543473 KRT36O76013 467 aa20.04■□□□□ 0.8
SUDS3-204ENST00000543473 NT5C1AQ9BXI3 368 aa20.04■□□□□ 0.8
SUDS3-204ENST00000543473 SHPRHQ149N8 1683 aa20.04■□□□□ 0.8
SUDS3-204ENST00000543473 WNT7AO00755 349 aa20.04■□□□□ 0.8
SUDS3-204ENST00000543473 GRIN3BO60391 1043 aa20.04■□□□□ 0.8
SUDS3-204ENST00000543473 RAG1P15918 1043 aa20.04■□□□□ 0.8
SUDS3-204ENST00000543473 S100A5P33763 92 aa20.04■□□□□ 0.8
SUDS3-204ENST00000543473 SKIV2L2P42285 1042 aaKnown RBP20.04■□□□□ 0.8
SUDS3-204ENST00000543473 PTK2BQ14289 1009 aa20.04■□□□□ 0.8
SUDS3-204ENST00000543473 KBTBD12Q3ZCT8 623 aa20.04■□□□□ 0.8
SUDS3-204ENST00000543473 ZBTB49Q6ZSB9 765 aa20.04■□□□□ 0.8
SUDS3-204ENST00000543473 HACD3Q9P035 362 aa20.04■□□□□ 0.8
SUDS3-204ENST00000543473 V9GYQ6 96 aa20.04■□□□□ 0.8
SUDS3-204ENST00000543473 ARP10275 920 aa20.04■□□□□ 0.8
SUDS3-204ENST00000543473 ALADP13716 330 aa20.04■□□□□ 0.8
SUDS3-204ENST00000543473 CPA3P15088 417 aa20.04■□□□□ 0.8
SUDS3-204ENST00000543473 NPTX2P47972 431 aa20.04■□□□□ 0.8
SUDS3-204ENST00000543473 CCNJLQ8IV13 435 aa20.04■□□□□ 0.8
SUDS3-204ENST00000543473 USP33Q8TEY7 942 aa20.04■□□□□ 0.8
SUDS3-204ENST00000543473 TNIP3Q96KP6 325 aa20.04■□□□□ 0.8
SUDS3-204ENST00000543473 PLEKHA5Q9HAU0 1116 aa20.04■□□□□ 0.8
SUDS3-204ENST00000543473 MROH7Q68CQ1 1323 aa20.04■□□□□ 0.8
SUDS3-204ENST00000543473 SDR42E2A6NKP2 422 aa20.03■□□□□ 0.8
SUDS3-204ENST00000543473 PSMA4P25789 261 aaKnown RBP20.03■□□□□ 0.8
SUDS3-204ENST00000543473 RBBP7Q16576 425 aa20.03■□□□□ 0.8
SUDS3-204ENST00000543473 NOP9Q86U38 636 aaKnown RBP20.03■□□□□ 0.8
SUDS3-204ENST00000543473 ZFRQ96KR1 1074 aaKnown RBP20.03■□□□□ 0.8
SUDS3-204ENST00000543473 FAM49BQ9NUQ9 324 aa20.03■□□□□ 0.8
SUDS3-204ENST00000543473 NIPSNAP3AQ9UFN0 247 aaPredicted RBP20.03■□□□□ 0.8
SUDS3-204ENST00000543473 KYQ8NBH2 561 aa20.03■□□□□ 0.8
SUDS3-204ENST00000543473 APBB2Q92870 758 aa20.03■□□□□ 0.8
SUDS3-204ENST00000543473 THAP1Q9NVV9 213 aa20.03■□□□□ 0.8
SUDS3-204ENST00000543473 MOCS2O96007 188 aaPredicted RBP20.03■□□□□ 0.8
SUDS3-204ENST00000543473 CNTFP26441 200 aa20.03■□□□□ 0.8
SUDS3-204ENST00000543473 FDFT1P37268 417 aa20.03■□□□□ 0.8
SUDS3-204ENST00000543473 SNAPC2Q13487 334 aa20.03■□□□□ 0.8
SUDS3-204ENST00000543473 MXD4Q14582 209 aaPredicted RBP20.03■□□□□ 0.8
SUDS3-204ENST00000543473 MFSD7Q6UXD7 560 aa20.03■□□□□ 0.8
SUDS3-204ENST00000543473 EGFL8Q99944 293 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms