RNA–Protein interactions for RNA: ENST00000543162.1

DDB1-221, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-221ENST00000543162 PNPLA8Q9NP80 782 aa11.24□□□□□ -0.61
DDB1-221ENST00000543162 OSGEPQ9NPF4 335 aa11.24□□□□□ -0.61
DDB1-221ENST00000543162 TLR9Q9NR96 1032 aa11.24□□□□□ -0.61
DDB1-221ENST00000543162 AFF4Q9UHB7 1163 aaKnown RBP11.24□□□□□ -0.61
DDB1-221ENST00000543162 COG5Q9UP83 839 aa11.24□□□□□ -0.61
DDB1-221ENST00000543162 PDE4DIPQ5VU43 2346 aa11.24□□□□□ -0.61
DDB1-221ENST00000543162 TCRBV5S1A1TA0A578 114 aa11.23□□□□□ -0.61
DDB1-221ENST00000543162 SIGLEC16A6NMB1 481 aa11.23□□□□□ -0.61
DDB1-221ENST00000543162 HHLA1C9JL84 531 aa11.23□□□□□ -0.61
DDB1-221ENST00000543162 GRM6O15303 877 aa11.23□□□□□ -0.61
DDB1-221ENST00000543162 TEX28O15482 410 aa11.23□□□□□ -0.61
DDB1-221ENST00000543162 PAPSS1O43252 624 aaPredicted RBP11.23□□□□□ -0.61
DDB1-221ENST00000543162 MTA2O94776 668 aa11.23□□□□□ -0.61
DDB1-221ENST00000543162 ABLIM3O94929 683 aa11.23□□□□□ -0.61
DDB1-221ENST00000543162 VNN2O95498 520 aa11.23□□□□□ -0.61
DDB1-221ENST00000543162 CNPP09543 421 aaKnown RBP11.23□□□□□ -0.61
DDB1-221ENST00000543162 HAPLN1P10915 354 aaPredicted RBP11.23□□□□□ -0.61
DDB1-221ENST00000543162 KRT3P12035 628 aa11.23□□□□□ -0.61
DDB1-221ENST00000543162 DNAJB1P25685 340 aa11.23□□□□□ -0.61
DDB1-221ENST00000543162 TKTL1P51854 596 aa11.23□□□□□ -0.61
DDB1-221ENST00000543162 HADHBP55084 474 aaKnown RBP11.23□□□□□ -0.61
DDB1-221ENST00000543162 GSCP56915 257 aaPredicted RBP11.23□□□□□ -0.61
DDB1-221ENST00000543162 ERVFC1P60507 584 aa11.23□□□□□ -0.61
DDB1-221ENST00000543162 ETF1P62495 437 aaKnown RBP11.23□□□□□ -0.61
DDB1-221ENST00000543162 RPL10AP62906 217 aaKnown RBP11.23□□□□□ -0.61
DDB1-221ENST00000543162 SLC6A3Q01959 620 aa11.23□□□□□ -0.61
DDB1-221ENST00000543162 DUSP4Q13115 394 aa11.23□□□□□ -0.61
DDB1-221ENST00000543162 GPM6BQ13491 265 aa11.23□□□□□ -0.61
DDB1-221ENST00000543162 MGAT5BQ3V5L5 792 aa11.23□□□□□ -0.61
DDB1-221ENST00000543162 FAM102AQ5T9C2 384 aaPredicted RBP11.23□□□□□ -0.61
DDB1-221ENST00000543162 PLPP4Q5VZY2 271 aa11.23□□□□□ -0.61
DDB1-221ENST00000543162 PPP2R2DQ66LE6 453 aa11.23□□□□□ -0.61
DDB1-221ENST00000543162 DCUN1D2Q6PH85 259 aa11.23□□□□□ -0.61
DDB1-221ENST00000543162 FAM183BPQ6ZVS7 135 aa11.23□□□□□ -0.61
DDB1-221ENST00000543162 TTC9BQ8N6N2 239 aa11.23□□□□□ -0.61
DDB1-221ENST00000543162 TRIM58Q8NG06 486 aa11.23□□□□□ -0.61
DDB1-221ENST00000543162 TPCN2Q8NHX9 752 aa11.23□□□□□ -0.61
DDB1-221ENST00000543162 FEZF2Q8TBJ5 459 aa11.23□□□□□ -0.61
DDB1-221ENST00000543162 MICAL1Q8TDZ2 1067 aa11.23□□□□□ -0.61
DDB1-221ENST00000543162 SEPT5Q99719 369 aaPredicted RBP11.23□□□□□ -0.61
DDB1-221ENST00000543162 EMILIN2Q9BXX0 1053 aa11.23□□□□□ -0.61
DDB1-221ENST00000543162 SLC28A3Q9HAS3 691 aa11.23□□□□□ -0.61
DDB1-221ENST00000543162 NGRNQ9NPE2 291 aaKnown RBP11.23□□□□□ -0.61
DDB1-221ENST00000543162 SLC27A5Q9Y2P5 690 aa11.23□□□□□ -0.61
DDB1-221ENST00000543162 CAPN6Q9Y6Q1 641 aa11.23□□□□□ -0.61
DDB1-221ENST00000543162 GRID2IPA4D2P6 1211 aa11.22□□□□□ -0.61
DDB1-221ENST00000543162 H3BNC9 293 aa11.22□□□□□ -0.61
DDB1-221ENST00000543162 BUB1BO60566 1050 aaPredicted RBP11.22□□□□□ -0.61
DDB1-221ENST00000543162 PALMO75781 387 aa11.22□□□□□ -0.61
DDB1-221ENST00000543162 FBXO21O94952 628 aa11.22□□□□□ -0.61
DDB1-221ENST00000543162 CSPG5O95196 566 aa11.22□□□□□ -0.61
DDB1-221ENST00000543162 GJB6O95452 261 aa11.22□□□□□ -0.61
DDB1-221ENST00000543162 TUBB4AP04350 444 aa11.22□□□□□ -0.61
DDB1-221ENST00000543162 ADH1AP07327 375 aa11.22□□□□□ -0.61
DDB1-221ENST00000543162 TNNT1P13805 278 aa11.22□□□□□ -0.61
DDB1-221ENST00000543162 ATF2P15336 505 aa11.22□□□□□ -0.61
DDB1-221ENST00000543162 ELF1P32519 619 aa11.22□□□□□ -0.61
DDB1-221ENST00000543162 SCNN1AP37088 669 aa11.22□□□□□ -0.61
DDB1-221ENST00000543162 TUFMP49411 452 aaKnown RBP11.22□□□□□ -0.61
DDB1-221ENST00000543162 DDR2Q16832 855 aa11.22□□□□□ -0.61
DDB1-221ENST00000543162 RAB41Q5JT25 222 aa11.22□□□□□ -0.61
DDB1-221ENST00000543162 PPP1R15BQ5SWA1 713 aa11.22□□□□□ -0.61
DDB1-221ENST00000543162 PDE12Q6L8Q7 609 aaKnown RBP11.22□□□□□ -0.61
DDB1-221ENST00000543162 OLFML1Q6UWY5 402 aa11.22□□□□□ -0.61
DDB1-221ENST00000543162 CHRDL2Q6WN34 429 aa11.22□□□□□ -0.61
DDB1-221ENST00000543162 GPRIN1Q7Z2K8 1008 aa11.22□□□□□ -0.61
DDB1-221ENST00000543162 DAAM2Q86T65 1068 aa11.22□□□□□ -0.61
DDB1-221ENST00000543162 SYCE1Q8N0S2 351 aa11.22□□□□□ -0.61
DDB1-221ENST00000543162 SLC35F6Q8N357 371 aa11.22□□□□□ -0.61
DDB1-221ENST00000543162 MRPL43Q8N983 215 aaKnown RBP11.22□□□□□ -0.61
DDB1-221ENST00000543162 MCEEQ96PE7 176 aa11.22□□□□□ -0.61
DDB1-221ENST00000543162 KLHL5Q96PQ7 755 aa11.22□□□□□ -0.61
DDB1-221ENST00000543162 ULBP1Q9BZM6 244 aa11.22□□□□□ -0.61
DDB1-221ENST00000543162 CRISPLD1Q9H336 500 aa11.22□□□□□ -0.61
DDB1-221ENST00000543162 CERS4Q9HA82 394 aa11.22□□□□□ -0.61
DDB1-221ENST00000543162 CYP4F11Q9HBI6 524 aa11.22□□□□□ -0.61
DDB1-221ENST00000543162 CNGB3Q9NQW8 809 aa11.22□□□□□ -0.61
DDB1-221ENST00000543162 METTL5Q9NRN9 209 aaKnown RBP11.22□□□□□ -0.61
DDB1-221ENST00000543162 HSFX1Q9UBD0 423 aa11.22□□□□□ -0.61
DDB1-221ENST00000543162 ANAPC7Q9UJX3 599 aa11.22□□□□□ -0.61
DDB1-221ENST00000543162 MAFFQ9ULX9 164 aa11.22□□□□□ -0.61
DDB1-221ENST00000543162 PCDHGC5Q9Y5F6 944 aa11.22□□□□□ -0.61
DDB1-221ENST00000543162 IRAK3Q9Y616 596 aa11.22□□□□□ -0.61
DDB1-221ENST00000543162 PATJQ8NI35 1801 aa11.21□□□□□ -0.61
DDB1-221ENST00000543162 TMEM191CA6NGB0 347 aa11.21□□□□□ -0.61
DDB1-221ENST00000543162 C2orf71A6NGG8 1288 aa11.21□□□□□ -0.61
DDB1-221ENST00000543162 TMEM110-MUSTN1A8MSY1 372 aa11.21□□□□□ -0.61
DDB1-221ENST00000543162 MYO1FO00160 1098 aa11.21□□□□□ -0.61
DDB1-221ENST00000543162 PRRG1O14668 218 aa11.21□□□□□ -0.61
DDB1-221ENST00000543162 TNFRSF10BO14763 440 aa11.21□□□□□ -0.61
DDB1-221ENST00000543162 FSCN2O14926 492 aa11.21□□□□□ -0.61
DDB1-221ENST00000543162 SART1O43290 800 aaKnown RBP11.21□□□□□ -0.61
DDB1-221ENST00000543162 SOAT2O75908 522 aa11.21□□□□□ -0.61
DDB1-221ENST00000543162 SEC24AO95486 1093 aa11.21□□□□□ -0.61
DDB1-221ENST00000543162 ZBED1O96006 694 aa11.21□□□□□ -0.61
DDB1-221ENST00000543162 KLRC2P26717 231 aa11.21□□□□□ -0.61
DDB1-221ENST00000543162 RFC1P35251 1148 aaPredicted RBP11.21□□□□□ -0.61
DDB1-221ENST00000543162 GPR15P49685 360 aa11.21□□□□□ -0.61
DDB1-221ENST00000543162 SLC5A3P53794 718 aa11.21□□□□□ -0.61
DDB1-221ENST00000543162 RNASE9P60153 205 aaKnown RBP11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms