RNA–Protein interactions for RNA: ENST00000543025.5

KDM2B-216, Transcript of lysine demethylase 2B, humanhuman

TSL 1 (best)

Gene KDM2B, Length 2,522 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2B-216ENST00000543025 KCNV2Q8TDN2 545 aa17.34■□□□□ 0.37
KDM2B-216ENST00000543025 ANKRD36BP1Q96IX9 119 aa17.34■□□□□ 0.37
KDM2B-216ENST00000543025 KLF6Q99612 283 aaPredicted RBP17.34■□□□□ 0.37
KDM2B-216ENST00000543025 TRIM55Q9BYV6 548 aa17.34■□□□□ 0.37
KDM2B-216ENST00000543025 SYNCQ9H7C4 482 aa17.34■□□□□ 0.37
KDM2B-216ENST00000543025 TLE6Q9H808 572 aa17.34■□□□□ 0.37
KDM2B-216ENST00000543025 HOXC10Q9NYD6 342 aa17.34■□□□□ 0.37
KDM2B-216ENST00000543025 A0A0G2JLL6 359 aaPredicted RBP17.33■□□□□ 0.36
KDM2B-216ENST00000543025 SPDYE16A6NNV3 312 aaPredicted RBP17.33■□□□□ 0.36
KDM2B-216ENST00000543025 LPXNO60711 386 aa17.33■□□□□ 0.36
KDM2B-216ENST00000543025 LUC7L3O95232 432 aaKnown RBP17.33■□□□□ 0.36
KDM2B-216ENST00000543025 RBP3P10745 1247 aa17.33■□□□□ 0.36
KDM2B-216ENST00000543025 GM2AP17900 193 aa17.33■□□□□ 0.36
KDM2B-216ENST00000543025 HUNKP57058 714 aa17.33■□□□□ 0.36
KDM2B-216ENST00000543025 CNTN2Q02246 1040 aa17.33■□□□□ 0.36
KDM2B-216ENST00000543025 IER5Q5VY09 327 aa17.33■□□□□ 0.36
KDM2B-216ENST00000543025 PRRT2Q7Z6L0 340 aaPredicted RBP17.33■□□□□ 0.36
KDM2B-216ENST00000543025 XYLT1Q86Y38 959 aa17.33■□□□□ 0.36
KDM2B-216ENST00000543025 ENDOVQ8N8Q3 282 aaKnown RBP17.33■□□□□ 0.36
KDM2B-216ENST00000543025 CMASQ8NFW8 434 aaPredicted RBP17.33■□□□□ 0.36
KDM2B-216ENST00000543025 SH3TC2Q8TF17 1288 aa17.33■□□□□ 0.36
KDM2B-216ENST00000543025 NUDCD1Q96RS6 583 aa17.33■□□□□ 0.36
KDM2B-216ENST00000543025 CPXM1Q96SM3 734 aa17.33■□□□□ 0.36
KDM2B-216ENST00000543025 NXF1Q9UBU9 619 aaKnown RBP17.33■□□□□ 0.36
KDM2B-216ENST00000543025 PCSK1NQ9UHG2 260 aa17.33■□□□□ 0.36
KDM2B-216ENST00000543025 CHMP2BQ9UQN3 213 aa17.33■□□□□ 0.36
KDM2B-216ENST00000543025 IKBKGQ9Y6K9 419 aa17.33■□□□□ 0.36
KDM2B-216ENST00000543025 CXCL11O14625 94 aa17.32■□□□□ 0.36
KDM2B-216ENST00000543025 ABLIM1O14639 778 aa17.32■□□□□ 0.36
KDM2B-216ENST00000543025 MT-ND3P03897 115 aa17.32■□□□□ 0.36
KDM2B-216ENST00000543025 SRGAP2CP0DJJ0 459 aa17.32■□□□□ 0.36
KDM2B-216ENST00000543025 OVGP1Q12889 678 aa17.32■□□□□ 0.36
KDM2B-216ENST00000543025 DPYSL3Q14195 570 aa17.32■□□□□ 0.36
KDM2B-216ENST00000543025 RFWD2Q8NHY2 731 aa17.32■□□□□ 0.36
KDM2B-216ENST00000543025 NAF1Q96HR8 494 aaKnown RBP17.32■□□□□ 0.36
KDM2B-216ENST00000543025 TSSK1BQ9BXA7 367 aa17.32■□□□□ 0.36
KDM2B-216ENST00000543025 RNF8O76064 485 aa17.32■□□□□ 0.36
KDM2B-216ENST00000543025 ECM2O94769 699 aaPredicted RBP17.32■□□□□ 0.36
KDM2B-216ENST00000543025 MARK3P27448 753 aa17.32■□□□□ 0.36
KDM2B-216ENST00000543025 RAD23BP54727 409 aa17.32■□□□□ 0.36
KDM2B-216ENST00000543025 PTK7Q13308 1070 aa17.32■□□□□ 0.36
KDM2B-216ENST00000543025 ACAP1Q15027 740 aa17.32■□□□□ 0.36
KDM2B-216ENST00000543025 RNF149Q8NC42 400 aa17.32■□□□□ 0.36
KDM2B-216ENST00000543025 CHST13Q8NET6 341 aa17.32■□□□□ 0.36
KDM2B-216ENST00000543025 SPATA18Q8TC71 538 aa17.32■□□□□ 0.36
KDM2B-216ENST00000543025 HSPH1Q92598 858 aa17.32■□□□□ 0.36
KDM2B-216ENST00000543025 C12orf65Q9H3J6 166 aaKnown RBP17.32■□□□□ 0.36
KDM2B-216ENST00000543025 POLIQ9UNA4 740 aa17.32■□□□□ 0.36
KDM2B-216ENST00000543025 PPME1Q9Y570 386 aa17.32■□□□□ 0.36
KDM2B-216ENST00000543025 NUMBLQ9Y6R0 609 aa17.32■□□□□ 0.36
KDM2B-216ENST00000543025 A0A0G2JND7 137 aa17.31■□□□□ 0.36
KDM2B-216ENST00000543025 LIN7AO14910 233 aaPredicted RBP17.31■□□□□ 0.36
KDM2B-216ENST00000543025 B4GALT4O60513 344 aa17.31■□□□□ 0.36
KDM2B-216ENST00000543025 MIPP30301 263 aa17.31■□□□□ 0.36
KDM2B-216ENST00000543025 TCF7P36402 384 aaPredicted RBP17.31■□□□□ 0.36
KDM2B-216ENST00000543025 ELK3P41970 407 aa17.31■□□□□ 0.36
KDM2B-216ENST00000543025 LAMTOR4Q0VGL1 99 aa17.31■□□□□ 0.36
KDM2B-216ENST00000543025 MXD4Q14582 209 aaPredicted RBP17.31■□□□□ 0.36
KDM2B-216ENST00000543025 WDR78Q5VTH9 848 aa17.31■□□□□ 0.36
KDM2B-216ENST00000543025 CHSY1Q86X52 802 aa17.31■□□□□ 0.36
KDM2B-216ENST00000543025 PTPRN2Q92932 1015 aa17.31■□□□□ 0.36
KDM2B-216ENST00000543025 APOPT1Q96IL0 206 aa17.31■□□□□ 0.36
KDM2B-216ENST00000543025 TUBB6Q9BUF5 446 aa17.31■□□□□ 0.36
KDM2B-216ENST00000543025 CALN1Q9BXU9 219 aa17.31■□□□□ 0.36
KDM2B-216ENST00000543025 TRIM6Q9C030 488 aaPredicted RBP17.31■□□□□ 0.36
KDM2B-216ENST00000543025 RSAD1Q9HA92 442 aa17.31■□□□□ 0.36
KDM2B-216ENST00000543025 KANSL3Q9P2N6 904 aa17.31■□□□□ 0.36
KDM2B-216ENST00000543025 USP18Q9UMW8 372 aa17.31■□□□□ 0.36
KDM2B-216ENST00000543025 ERBB2P04626 1255 aa17.31■□□□□ 0.36
KDM2B-216ENST00000543025 INHBAP08476 426 aa17.31■□□□□ 0.36
KDM2B-216ENST00000543025 DHRS4L1P0CG22 281 aa17.31■□□□□ 0.36
KDM2B-216ENST00000543025 STIP1P31948 543 aaKnown RBP17.31■□□□□ 0.36
KDM2B-216ENST00000543025 RAP1GAPP47736 663 aa17.31■□□□□ 0.36
KDM2B-216ENST00000543025 TREML2Q5T2D2 321 aa17.31■□□□□ 0.36
KDM2B-216ENST00000543025 GADL1Q6ZQY3 521 aa17.31■□□□□ 0.36
KDM2B-216ENST00000543025 SAPCD2Q86UD0 394 aa17.31■□□□□ 0.36
KDM2B-216ENST00000543025 DENND2DQ9H6A0 471 aaPredicted RBP17.31■□□□□ 0.36
KDM2B-216ENST00000543025 LRRC42Q9Y546 428 aa17.31■□□□□ 0.36
KDM2B-216ENST00000543025 TCRBV9S1A1TA0A576 114 aa17.3■□□□□ 0.36
KDM2B-216ENST00000543025 KBTBD13C9JR72 458 aa17.3■□□□□ 0.36
KDM2B-216ENST00000543025 CCDC22O60826 627 aa17.3■□□□□ 0.36
KDM2B-216ENST00000543025 SPAG6O75602 509 aa17.3■□□□□ 0.36
KDM2B-216ENST00000543025 HAUS5O94927 633 aa17.3■□□□□ 0.36
KDM2B-216ENST00000543025 TGDSO95455 350 aa17.3■□□□□ 0.36
KDM2B-216ENST00000543025 LMNAP02545 664 aaKnown RBP17.3■□□□□ 0.36
KDM2B-216ENST00000543025 KRT19P08727 400 aa17.3■□□□□ 0.36
KDM2B-216ENST00000543025 ETV4P43268 484 aa17.3■□□□□ 0.36
KDM2B-216ENST00000543025 ARFIP2P53365 341 aa17.3■□□□□ 0.36
KDM2B-216ENST00000543025 ZNF200P98182 395 aaPredicted RBP17.3■□□□□ 0.36
KDM2B-216ENST00000543025 ROR1Q01973 937 aa17.3■□□□□ 0.36
KDM2B-216ENST00000543025 ZNF667Q5HYK9 610 aa17.3■□□□□ 0.36
KDM2B-216ENST00000543025 MPZL3Q6UWV2 235 aa17.3■□□□□ 0.36
KDM2B-216ENST00000543025 SLC44A1Q8WWI5 657 aa17.3■□□□□ 0.36
KDM2B-216ENST00000543025 FAM167AQ96KS9 214 aa17.3■□□□□ 0.36
KDM2B-216ENST00000543025 BCO2Q9BYV7 579 aa17.3■□□□□ 0.36
KDM2B-216ENST00000543025 C2orf40Q9H1Z8 148 aa17.3■□□□□ 0.36
KDM2B-216ENST00000543025 HEY2Q9UBP5 337 aa17.3■□□□□ 0.36
KDM2B-216ENST00000543025 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.3■□□□□ 0.36
KDM2B-216ENST00000543025 GAS2O43903 313 aaKnown RBP17.3■□□□□ 0.36
KDM2B-216ENST00000543025 TRUB2O95900 331 aaKnown RBP17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms