RNA–Protein interactions for RNA: ENST00000542570.5

TOP3A-208, Transcript of DNA topoisomerase III alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3A, Length 4,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-208ENST00000542570 SP110Q9HB58 689 aa10.59□□□□□ -0.71
TOP3A-208ENST00000542570 HPCAL4Q9UM19 191 aa10.59□□□□□ -0.71
TOP3A-208ENST00000542570 AP4E1Q9UPM8 1137 aa10.59□□□□□ -0.71
TOP3A-208ENST00000542570 NR2E3Q9Y5X4 410 aa10.59□□□□□ -0.71
TOP3A-208ENST00000542570 CACNA1SQ13698 1873 aa10.59□□□□□ -0.71
TOP3A-208ENST00000542570 O00370 1275 aa10.59□□□□□ -0.71
TOP3A-208ENST00000542570 PLA2G4AP47712 749 aa10.59□□□□□ -0.71
TOP3A-208ENST00000542570 CLCNKBP51801 687 aa10.59□□□□□ -0.71
TOP3A-208ENST00000542570 BTG3Q14201 252 aaPredicted RBP10.59□□□□□ -0.71
TOP3A-208ENST00000542570 CCDC142Q17RM4 750 aa10.59□□□□□ -0.71
TOP3A-208ENST00000542570 DENND5BQ6ZUT9 1274 aa10.59□□□□□ -0.71
TOP3A-208ENST00000542570 CACNA2D3Q8IZS8 1091 aa10.59□□□□□ -0.71
TOP3A-208ENST00000542570 TTC39CQ8N584 583 aa10.59□□□□□ -0.71
TOP3A-208ENST00000542570 ATAD1Q8NBU5 361 aa10.59□□□□□ -0.71
TOP3A-208ENST00000542570 ST13P5Q8NFI4 369 aaPredicted RBP10.59□□□□□ -0.71
TOP3A-208ENST00000542570 CRYGNQ8WXF5 182 aa10.59□□□□□ -0.71
TOP3A-208ENST00000542570 CCDC68Q9H2F9 335 aa10.59□□□□□ -0.71
TOP3A-208ENST00000542570 INTUQ9ULD6 942 aa10.59□□□□□ -0.71
TOP3A-208ENST00000542570 MYADML2A6NDP7 307 aa10.58□□□□□ -0.72
TOP3A-208ENST00000542570 TRDMT1O14717 391 aaKnown RBP10.58□□□□□ -0.72
TOP3A-208ENST00000542570 PTPN1P18031 435 aaKnown RBP10.58□□□□□ -0.72
TOP3A-208ENST00000542570 ALDH3A1P30838 453 aa10.58□□□□□ -0.72
TOP3A-208ENST00000542570 HSD17B3P37058 310 aa10.58□□□□□ -0.72
TOP3A-208ENST00000542570 CTCFP49711 727 aaPredicted RBP10.58□□□□□ -0.72
TOP3A-208ENST00000542570 NOMO3P69849 1222 aa10.58□□□□□ -0.72
TOP3A-208ENST00000542570 THOC5Q13769 683 aaKnown RBP10.58□□□□□ -0.72
TOP3A-208ENST00000542570 RCN2Q14257 317 aa10.58□□□□□ -0.72
TOP3A-208ENST00000542570 TERF2Q15554 542 aa10.58□□□□□ -0.72
TOP3A-208ENST00000542570 EFHC1Q5JVL4 640 aa10.58□□□□□ -0.72
TOP3A-208ENST00000542570 SPOCD1Q6ZMY3 1216 aa10.58□□□□□ -0.72
TOP3A-208ENST00000542570 MMGT1Q8N4V1 131 aa10.58□□□□□ -0.72
TOP3A-208ENST00000542570 EFHBQ8N7U6 833 aa10.58□□□□□ -0.72
TOP3A-208ENST00000542570 EPS8L3Q8TE67 593 aaKnown RBP10.58□□□□□ -0.72
TOP3A-208ENST00000542570 SEPT8Q92599 483 aa10.58□□□□□ -0.72
TOP3A-208ENST00000542570 ELOVL4Q9GZR5 314 aa10.58□□□□□ -0.72
TOP3A-208ENST00000542570 L1RE1Q9UN81 338 aa10.58□□□□□ -0.72
TOP3A-208ENST00000542570 ZMYM2Q9UBW7 1377 aa10.58□□□□□ -0.72
TOP3A-208ENST00000542570 FAM187AA6NFU0 413 aa10.58□□□□□ -0.72
TOP3A-208ENST00000542570 H3BQF6 201 aa10.58□□□□□ -0.72
TOP3A-208ENST00000542570 TULP2O00295 520 aa10.58□□□□□ -0.72
TOP3A-208ENST00000542570 VNN1O95497 513 aa10.58□□□□□ -0.72
TOP3A-208ENST00000542570 JCHAINP01591 159 aa10.58□□□□□ -0.72
TOP3A-208ENST00000542570 INHAP05111 366 aa10.58□□□□□ -0.72
TOP3A-208ENST00000542570 TPH1P17752 444 aa10.58□□□□□ -0.72
TOP3A-208ENST00000542570 DHX34Q14147 1143 aaKnown RBP10.58□□□□□ -0.72
TOP3A-208ENST00000542570 SH3PXD2AQ5TCZ1 1133 aa10.58□□□□□ -0.72
TOP3A-208ENST00000542570 GKAP1Q5VSY0 366 aaPredicted RBP10.58□□□□□ -0.72
TOP3A-208ENST00000542570 TAS1R3Q7RTX0 852 aa10.58□□□□□ -0.72
TOP3A-208ENST00000542570 DBF4BQ8NFT6 615 aa10.58□□□□□ -0.72
TOP3A-208ENST00000542570 KAT2BQ92831 832 aa10.58□□□□□ -0.72
TOP3A-208ENST00000542570 ALKBH8Q96BT7 664 aaKnown RBP10.58□□□□□ -0.72
TOP3A-208ENST00000542570 TWNKQ96RR1 684 aa10.58□□□□□ -0.72
TOP3A-208ENST00000542570 CNPY3Q9BT09 278 aa10.58□□□□□ -0.72
TOP3A-208ENST00000542570 APOL5Q9BWW9 433 aa10.58□□□□□ -0.72
TOP3A-208ENST00000542570 SIPA1L3O60292 1781 aaPredicted RBP10.58□□□□□ -0.72
TOP3A-208ENST00000542570 SLC12A8A0AV02 714 aa10.58□□□□□ -0.72
TOP3A-208ENST00000542570 MEIS3P2A8K0S8 358 aa10.58□□□□□ -0.72
TOP3A-208ENST00000542570 FKTNO75072 461 aa10.58□□□□□ -0.72
TOP3A-208ENST00000542570 DUSP11O75319 330 aaKnown RBP10.58□□□□□ -0.72
TOP3A-208ENST00000542570 BANF1O75531 89 aa10.58□□□□□ -0.72
TOP3A-208ENST00000542570 SOAT2O75908 522 aa10.58□□□□□ -0.72
TOP3A-208ENST00000542570 CKMP06732 381 aa10.58□□□□□ -0.72
TOP3A-208ENST00000542570 GSTA1P08263 222 aa10.58□□□□□ -0.72
TOP3A-208ENST00000542570 GSTA2P09210 222 aa10.58□□□□□ -0.72
TOP3A-208ENST00000542570 XPAP23025 273 aaPredicted RBP10.58□□□□□ -0.72
TOP3A-208ENST00000542570 PMLP29590 882 aa10.58□□□□□ -0.72
TOP3A-208ENST00000542570 ATXN1P54253 815 aaKnown RBP10.58□□□□□ -0.72
TOP3A-208ENST00000542570 TMPRSS15P98073 1019 aa10.58□□□□□ -0.72
TOP3A-208ENST00000542570 VEPH1Q14D04 833 aa10.58□□□□□ -0.72
TOP3A-208ENST00000542570 TFDP3Q5H9I0 405 aa10.58□□□□□ -0.72
TOP3A-208ENST00000542570 ZNF618Q5T7W0 954 aa10.58□□□□□ -0.72
TOP3A-208ENST00000542570 FYB2Q5VWT5 728 aa10.58□□□□□ -0.72
TOP3A-208ENST00000542570 CEP128Q6ZU80 1094 aa10.58□□□□□ -0.72
TOP3A-208ENST00000542570 FAM183BPQ6ZVS7 135 aa10.58□□□□□ -0.72
TOP3A-208ENST00000542570 PPP4R1Q8TF05 950 aa10.58□□□□□ -0.72
TOP3A-208ENST00000542570 NTPCRQ9BSD7 190 aaKnown RBP10.58□□□□□ -0.72
TOP3A-208ENST00000542570 GOLGA8TH3BQL2 631 aa10.57□□□□□ -0.72
TOP3A-208ENST00000542570 RPL17P18621 184 aaKnown RBP10.57□□□□□ -0.72
TOP3A-208ENST00000542570 FLT3P36888 993 aa10.57□□□□□ -0.72
TOP3A-208ENST00000542570 YWHAZP63104 245 aaKnown RBP10.57□□□□□ -0.72
TOP3A-208ENST00000542570 TAP1Q03518 808 aa10.57□□□□□ -0.72
TOP3A-208ENST00000542570 BST2Q10589 180 aaKnown RBP10.57□□□□□ -0.72
TOP3A-208ENST00000542570 BFSP2Q13515 415 aa10.57□□□□□ -0.72
TOP3A-208ENST00000542570 SLC12A1Q13621 1099 aa10.57□□□□□ -0.72
TOP3A-208ENST00000542570 STILQ15468 1287 aa10.57□□□□□ -0.72
TOP3A-208ENST00000542570 RASAL3Q86YV0 1011 aa10.57□□□□□ -0.72
TOP3A-208ENST00000542570 KCNK16Q96T55 309 aa10.57□□□□□ -0.72
TOP3A-208ENST00000542570 RHOBTB2Q9BYZ6 727 aa10.57□□□□□ -0.72
TOP3A-208ENST00000542570 ERVK-5Q9HDB9 667 aa10.57□□□□□ -0.72
TOP3A-208ENST00000542570 MAGEA4P43358 317 aa10.57□□□□□ -0.72
TOP3A-208ENST00000542570 NDUFV1P49821 464 aa10.57□□□□□ -0.72
TOP3A-208ENST00000542570 CRYBB1P53674 252 aaPredicted RBP10.57□□□□□ -0.72
TOP3A-208ENST00000542570 NRLP54845 237 aa10.57□□□□□ -0.72
TOP3A-208ENST00000542570 MARSP56192 900 aaKnown RBP10.57□□□□□ -0.72
TOP3A-208ENST00000542570 ZNF792Q3KQV3 632 aa10.57□□□□□ -0.72
TOP3A-208ENST00000542570 BOLA3Q53S33 107 aa10.57□□□□□ -0.72
TOP3A-208ENST00000542570 GDF6Q6KF10 455 aaPredicted RBP10.57□□□□□ -0.72
TOP3A-208ENST00000542570 MORC4Q8TE76 937 aa10.57□□□□□ -0.72
TOP3A-208ENST00000542570 DDX23Q9BUQ8 820 aaKnown RBP10.57□□□□□ -0.72
TOP3A-208ENST00000542570 UBN1Q9NPG3 1134 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms