RNA–Protein interactions for RNA: ENST00000542557.5

PTPRO-208, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRO, Length 2,946 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-208ENST00000542557 CYP4V2Q6ZWL3 525 aaPredicted RBP6.85□□□□□ -1.31
PTPRO-208ENST00000542557 USP50Q70EL3 339 aaPredicted RBP6.85□□□□□ -1.31
PTPRO-208ENST00000542557 MOB2Q70IA6 237 aa6.85□□□□□ -1.31
PTPRO-208ENST00000542557 PARP9Q8IXQ6 854 aa6.85□□□□□ -1.31
PTPRO-208ENST00000542557 PLCD3Q8N3E9 789 aa6.85□□□□□ -1.31
PTPRO-208ENST00000542557 PYROXD1Q8WU10 500 aa6.85□□□□□ -1.31
PTPRO-208ENST00000542557 TEKT4Q8WW24 435 aa6.85□□□□□ -1.31
PTPRO-208ENST00000542557 CPB2Q96IY4 423 aa6.85□□□□□ -1.31
PTPRO-208ENST00000542557 ACAP3Q96P50 834 aa6.85□□□□□ -1.31
PTPRO-208ENST00000542557 NCAPGQ9BPX3 1015 aa6.85□□□□□ -1.31
PTPRO-208ENST00000542557 NT5C1AQ9BXI3 368 aa6.85□□□□□ -1.31
PTPRO-208ENST00000542557 KATNBL1Q9H079 304 aa6.85□□□□□ -1.31
PTPRO-208ENST00000542557 PLEKHA5Q9HAU0 1116 aa6.85□□□□□ -1.31
PTPRO-208ENST00000542557 RXFP1Q9HBX9 757 aa6.85□□□□□ -1.31
PTPRO-208ENST00000542557 GBA2Q9HCG7 927 aaPredicted RBP6.85□□□□□ -1.31
PTPRO-208ENST00000542557 MLXIPLQ9NP71 852 aa6.85□□□□□ -1.31
PTPRO-208ENST00000542557 DPP3Q9NY33 737 aa6.85□□□□□ -1.31
PTPRO-208ENST00000542557 RABGEF1Q9UJ41 708 aa6.85□□□□□ -1.31
PTPRO-208ENST00000542557 STARD13Q9Y3M8 1113 aa6.85□□□□□ -1.31
PTPRO-208ENST00000542557 POC1B-GALNT4F8VUJ3 575 aa6.84□□□□□ -1.31
PTPRO-208ENST00000542557 CHUKO15111 745 aa6.84□□□□□ -1.31
PTPRO-208ENST00000542557 SPAG6O75602 509 aa6.84□□□□□ -1.31
PTPRO-208ENST00000542557 TMEM63AO94886 807 aa6.84□□□□□ -1.31
PTPRO-208ENST00000542557 UBOX5O94941 541 aa6.84□□□□□ -1.31
PTPRO-208ENST00000542557 RBP3P10745 1247 aa6.84□□□□□ -1.31
PTPRO-208ENST00000542557 KRT15P19012 456 aa6.84□□□□□ -1.31
PTPRO-208ENST00000542557 CYP3A5P20815 502 aa6.84□□□□□ -1.31
PTPRO-208ENST00000542557 FOXN2P32314 431 aa6.84□□□□□ -1.31
PTPRO-208ENST00000542557 SKIV2L2P42285 1042 aaKnown RBP6.84□□□□□ -1.31
PTPRO-208ENST00000542557 ROR1Q01973 937 aa6.84□□□□□ -1.31
PTPRO-208ENST00000542557 RNASELQ05823 741 aaKnown RBP6.84□□□□□ -1.31
PTPRO-208ENST00000542557 BNIP1Q12981 228 aa6.84□□□□□ -1.31
PTPRO-208ENST00000542557 TTLL12Q14166 644 aaPredicted RBP6.84□□□□□ -1.31
PTPRO-208ENST00000542557 PDK2Q15119 407 aa6.84□□□□□ -1.31
PTPRO-208ENST00000542557 SNCBQ16143 134 aa6.84□□□□□ -1.31
PTPRO-208ENST00000542557 MAP1SQ66K74 1059 aaPredicted RBP6.84□□□□□ -1.31
PTPRO-208ENST00000542557 ADGRD1Q6QNK2 874 aa6.84□□□□□ -1.31
PTPRO-208ENST00000542557 FAM183BPQ6ZVS7 135 aa6.84□□□□□ -1.31
PTPRO-208ENST00000542557 PDIK1LQ8N165 341 aa6.84□□□□□ -1.31
PTPRO-208ENST00000542557 CCDC63Q8NA47 563 aa6.84□□□□□ -1.31
PTPRO-208ENST00000542557 HSPH1Q92598 858 aa6.84□□□□□ -1.31
PTPRO-208ENST00000542557 RTP4Q96DX8 246 aa6.84□□□□□ -1.31
PTPRO-208ENST00000542557 HEXIM2Q96MH2 286 aaKnown RBP6.84□□□□□ -1.31
PTPRO-208ENST00000542557 PEBP4Q96S96 227 aa6.84□□□□□ -1.31
PTPRO-208ENST00000542557 TBCBQ99426 244 aa6.84□□□□□ -1.31
PTPRO-208ENST00000542557 C16orf70Q9BSU1 422 aa6.84□□□□□ -1.31
PTPRO-208ENST00000542557 FRMD8Q9BZ67 464 aaPredicted RBP6.84□□□□□ -1.31
PTPRO-208ENST00000542557 SAE1Q9UBE0 346 aaPredicted RBP6.84□□□□□ -1.31
PTPRO-208ENST00000542557 PCSK1NQ9UHG2 260 aa6.84□□□□□ -1.31
PTPRO-208ENST00000542557 TSPAN16Q9UKR8 245 aa6.84□□□□□ -1.31
PTPRO-208ENST00000542557 SLC45A1Q9Y2W3 748 aa6.84□□□□□ -1.31
PTPRO-208ENST00000542557 CFAP69A5D8W1 941 aa6.84□□□□□ -1.31
PTPRO-208ENST00000542557 E5RJQ4 531 aa6.84□□□□□ -1.31
PTPRO-208ENST00000542557 ATP2C2O75185 946 aa6.84□□□□□ -1.31
PTPRO-208ENST00000542557 ZWINTO95229 277 aa6.84□□□□□ -1.31
PTPRO-208ENST00000542557 VTNP04004 478 aa6.84□□□□□ -1.31
PTPRO-208ENST00000542557 NCALDP61601 193 aa6.84□□□□□ -1.31
PTPRO-208ENST00000542557 DPYSL3Q14195 570 aa6.84□□□□□ -1.31
PTPRO-208ENST00000542557 ZKSCAN8Q15776 578 aaPredicted RBP6.84□□□□□ -1.31
PTPRO-208ENST00000542557 PKDCCQ504Y2 493 aa6.84□□□□□ -1.31
PTPRO-208ENST00000542557 FNBP1LQ5T0N5 605 aa6.84□□□□□ -1.31
PTPRO-208ENST00000542557 LDLRAD1Q5T700 205 aa6.84□□□□□ -1.31
PTPRO-208ENST00000542557 TRNP1Q6NT89 227 aa6.84□□□□□ -1.31
PTPRO-208ENST00000542557 ZDHHC17Q8IUH5 632 aa6.84□□□□□ -1.31
PTPRO-208ENST00000542557 MAP7D3Q8IWC1 876 aa6.84□□□□□ -1.31
PTPRO-208ENST00000542557 UNC45BQ8IWX7 931 aa6.84□□□□□ -1.31
PTPRO-208ENST00000542557 FBXO36Q8NEA4 188 aa6.84□□□□□ -1.31
PTPRO-208ENST00000542557 GPRC5AQ8NFJ5 357 aa6.84□□□□□ -1.31
PTPRO-208ENST00000542557 SPATA18Q8TC71 538 aa6.84□□□□□ -1.31
PTPRO-208ENST00000542557 MZB1Q8WU39 189 aa6.84□□□□□ -1.31
PTPRO-208ENST00000542557 NLRP7Q8WX94 980 aa6.84□□□□□ -1.31
PTPRO-208ENST00000542557 RXFP2Q8WXD0 754 aa6.84□□□□□ -1.31
PTPRO-208ENST00000542557 ALKBH8Q96BT7 664 aaKnown RBP6.84□□□□□ -1.31
PTPRO-208ENST00000542557 L3MBTL3Q96JM7 780 aaPredicted RBP6.84□□□□□ -1.31
PTPRO-208ENST00000542557 WDR83Q9BRX9 315 aaKnown RBP6.84□□□□□ -1.31
PTPRO-208ENST00000542557 CALN1Q9BXU9 219 aa6.84□□□□□ -1.31
PTPRO-208ENST00000542557 PITPNM3Q9BZ71 974 aa6.84□□□□□ -1.31
PTPRO-208ENST00000542557 STAU2Q9NUL3 570 aaKnown RBP eCLIP6.84□□□□□ -1.31
PTPRO-208ENST00000542557 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.84□□□□□ -1.31
PTPRO-208ENST00000542557 RNF181Q9P0P0 153 aa6.84□□□□□ -1.31
PTPRO-208ENST00000542557 KLHL14Q9P2G3 628 aa6.84□□□□□ -1.31
PTPRO-208ENST00000542557 CHADO15335 359 aa6.83□□□□□ -1.32
PTPRO-208ENST00000542557 PRPSAP2O60256 369 aa6.83□□□□□ -1.32
PTPRO-208ENST00000542557 PFKMP08237 780 aa6.83□□□□□ -1.32
PTPRO-208ENST00000542557 PDGFRAP16234 1089 aa6.83□□□□□ -1.32
PTPRO-208ENST00000542557 ATP2A2P16615 1042 aaKnown RBP6.83□□□□□ -1.32
PTPRO-208ENST00000542557 TGM2P21980 687 aa6.83□□□□□ -1.32
PTPRO-208ENST00000542557 ADORA2AP29274 412 aa6.83□□□□□ -1.32
PTPRO-208ENST00000542557 GJA5P36382 358 aa6.83□□□□□ -1.32
PTPRO-208ENST00000542557 PSMC4P43686 418 aa6.83□□□□□ -1.32
PTPRO-208ENST00000542557 MNAT1P51948 309 aa6.83□□□□□ -1.32
PTPRO-208ENST00000542557 CDH6P55285 790 aa6.83□□□□□ -1.32
PTPRO-208ENST00000542557 SNX16P57768 344 aa6.83□□□□□ -1.32
PTPRO-208ENST00000542557 ELF3P78545 371 aaPredicted RBP6.83□□□□□ -1.32
PTPRO-208ENST00000542557 RIPK1Q13546 671 aa6.83□□□□□ -1.32
PTPRO-208ENST00000542557 TAF5Q15542 800 aa6.83□□□□□ -1.32
PTPRO-208ENST00000542557 MSS51Q4VC12 460 aa6.83□□□□□ -1.32
PTPRO-208ENST00000542557 BOLA3Q53S33 107 aa6.83□□□□□ -1.32
PTPRO-208ENST00000542557 OR6B2Q6IFH4 312 aa6.83□□□□□ -1.32
PTPRO-208ENST00000542557 OLFML1Q6UWY5 402 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms