RNA–Protein interactions for RNA: ENST00000540865.5

SNHG1-214, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-214ENST00000540865 TLR6Q9Y2C9 796 aa5.06□□□□□ -1.6
SNHG1-214ENST00000540865 INSL5Q9Y5Q6 135 aa5.06□□□□□ -1.6
SNHG1-214ENST00000540865 TENM4Q6N022 2769 aa5.06□□□□□ -1.6
SNHG1-214ENST00000540865 HECTD1Q9ULT8 2610 aa5.06□□□□□ -1.6
SNHG1-214ENST00000540865 CCDC196A0A1B0GTZ2 297 aa5.05□□□□□ -1.6
SNHG1-214ENST00000540865 SPAARA0A1B0GVQ0 90 aa5.05□□□□□ -1.6
SNHG1-214ENST00000540865 GOLGA8AA7E2F4 631 aa5.05□□□□□ -1.6
SNHG1-214ENST00000540865 GOLGA8BA8MQT2 603 aa5.05□□□□□ -1.6
SNHG1-214ENST00000540865 H7C4K7 107 aa5.05□□□□□ -1.6
SNHG1-214ENST00000540865 TRDMT1O14717 391 aaKnown RBP5.05□□□□□ -1.6
SNHG1-214ENST00000540865 SLC27A2O14975 620 aa5.05□□□□□ -1.6
SNHG1-214ENST00000540865 DCLK1O15075 740 aa5.05□□□□□ -1.6
SNHG1-214ENST00000540865 MEFVO15553 781 aaPredicted RBP5.05□□□□□ -1.6
SNHG1-214ENST00000540865 B4GALT5O43286 388 aa5.05□□□□□ -1.6
SNHG1-214ENST00000540865 APBB3O95704 486 aa5.05□□□□□ -1.6
SNHG1-214ENST00000540865 MYL4P12829 197 aa5.05□□□□□ -1.6
SNHG1-214ENST00000540865 GSPT1P15170 499 aaKnown RBP5.05□□□□□ -1.6
SNHG1-214ENST00000540865 YWHABP31946 246 aaKnown RBP5.05□□□□□ -1.6
SNHG1-214ENST00000540865 ARL2P36404 184 aa5.05□□□□□ -1.6
SNHG1-214ENST00000540865 PREPP48147 710 aa5.05□□□□□ -1.6
SNHG1-214ENST00000540865 ST13P50502 369 aaKnown RBP5.05□□□□□ -1.6
SNHG1-214ENST00000540865 IRX4P78413 519 aa5.05□□□□□ -1.6
SNHG1-214ENST00000540865 SIM1P81133 766 aaPredicted RBP5.05□□□□□ -1.6
SNHG1-214ENST00000540865 SCAPQ12770 1279 aa5.05□□□□□ -1.6
SNHG1-214ENST00000540865 TWF1Q12792 350 aa5.05□□□□□ -1.6
SNHG1-214ENST00000540865 SEMA3BQ13214 749 aa5.05□□□□□ -1.6
SNHG1-214ENST00000540865 PPP2R5CQ13362 524 aa5.05□□□□□ -1.6
SNHG1-214ENST00000540865 CAPSQ13938 189 aa5.05□□□□□ -1.6
SNHG1-214ENST00000540865 HNRNPDQ14103 355 aaKnown RBP5.05□□□□□ -1.6
SNHG1-214ENST00000540865 TEAD2Q15562 447 aa5.05□□□□□ -1.6
SNHG1-214ENST00000540865 UAP1L1Q3KQV9 507 aa5.05□□□□□ -1.6
SNHG1-214ENST00000540865 ITPRIPL2Q3MIP1 535 aa5.05□□□□□ -1.6
SNHG1-214ENST00000540865 XKR9Q5GH70 373 aa5.05□□□□□ -1.6
SNHG1-214ENST00000540865 TMEM196Q5HYL7 178 aa5.05□□□□□ -1.6
SNHG1-214ENST00000540865 EXOSC6Q5RKV6 272 aaKnown RBP5.05□□□□□ -1.6
SNHG1-214ENST00000540865 PMS2CLQ68D20 193 aa5.05□□□□□ -1.6
SNHG1-214ENST00000540865 MOXD1Q6UVY6 613 aa5.05□□□□□ -1.6
SNHG1-214ENST00000540865 CD300LGQ6UXG3 332 aa5.05□□□□□ -1.6
SNHG1-214ENST00000540865 ARID3BQ8IVW6 561 aaPredicted RBP5.05□□□□□ -1.6
SNHG1-214ENST00000540865 CHCHD4Q8N4Q1 142 aa5.05□□□□□ -1.6
SNHG1-214ENST00000540865 CCDC148Q8NFR7 591 aa5.05□□□□□ -1.6
SNHG1-214ENST00000540865 TTC8Q8TAM2 541 aa5.05□□□□□ -1.6
SNHG1-214ENST00000540865 TBCKQ8TEA7 893 aa5.05□□□□□ -1.6
SNHG1-214ENST00000540865 XPNPEP1Q9NQW7 623 aa5.05□□□□□ -1.6
SNHG1-214ENST00000540865 RAD18Q9NS91 495 aa5.05□□□□□ -1.6
SNHG1-214ENST00000540865 SNTG2Q9NY99 539 aa5.05□□□□□ -1.6
SNHG1-214ENST00000540865 GTSE1Q9NYZ3 720 aa5.05□□□□□ -1.6
SNHG1-214ENST00000540865 CEP72Q9P209 647 aa5.05□□□□□ -1.6
SNHG1-214ENST00000540865 WRAP73Q9P2S5 460 aaPredicted RBP5.05□□□□□ -1.6
SNHG1-214ENST00000540865 AFF4Q9UHB7 1163 aaKnown RBP5.05□□□□□ -1.6
SNHG1-214ENST00000540865 PCDHB5Q9Y5E4 795 aa5.05□□□□□ -1.6
SNHG1-214ENST00000540865 DOCK6Q96HP0 2047 aa5.05□□□□□ -1.6
SNHG1-214ENST00000540865 MTCL1Q9Y4B5 1905 aaKnown RBP5.05□□□□□ -1.6
SNHG1-214ENST00000540865 NOTCH4Q99466 2003 aa5.04□□□□□ -1.6
SNHG1-214ENST00000540865 GREB1Q4ZG55 1949 aa5.04□□□□□ -1.6
SNHG1-214ENST00000540865 CCDC194A0A1B0GVG4 234 aa5.04□□□□□ -1.6
SNHG1-214ENST00000540865 MEGF11A6BM72 1044 aa5.04□□□□□ -1.6
SNHG1-214ENST00000540865 PATE3B3GLJ2 98 aa5.04□□□□□ -1.6
SNHG1-214ENST00000540865 SYN3O14994 580 aa5.04□□□□□ -1.6
SNHG1-214ENST00000540865 N4BP3O15049 544 aa5.04□□□□□ -1.6
SNHG1-214ENST00000540865 TBX3O15119 743 aa5.04□□□□□ -1.6
SNHG1-214ENST00000540865 PRPF3O43395 683 aaKnown RBP5.04□□□□□ -1.6
SNHG1-214ENST00000540865 RECQL4O94761 1208 aa5.04□□□□□ -1.6
SNHG1-214ENST00000540865 TDP2O95551 362 aa5.04□□□□□ -1.6
SNHG1-214ENST00000540865 FGF19O95750 216 aa5.04□□□□□ -1.6
SNHG1-214ENST00000540865 H2AFB1P0C5Y9 115 aa5.04□□□□□ -1.6
SNHG1-214ENST00000540865 H2AFB2P0C5Z0 115 aa5.04□□□□□ -1.6
SNHG1-214ENST00000540865 GJA1P17302 382 aa5.04□□□□□ -1.6
SNHG1-214ENST00000540865 DRD1P21728 446 aa5.04□□□□□ -1.6
SNHG1-214ENST00000540865 IGFBP6P24592 240 aaPredicted RBP5.04□□□□□ -1.6
SNHG1-214ENST00000540865 GBP1P32455 592 aa5.04□□□□□ -1.6
SNHG1-214ENST00000540865 DPP6P42658 865 aa5.04□□□□□ -1.6
SNHG1-214ENST00000540865 MCM2P49736 904 aa5.04□□□□□ -1.6
SNHG1-214ENST00000540865 LIG3P49916 1009 aa5.04□□□□□ -1.6
SNHG1-214ENST00000540865 CLCNKBP51801 687 aa5.04□□□□□ -1.6
SNHG1-214ENST00000540865 ARPP19P56211 112 aa5.04□□□□□ -1.6
SNHG1-214ENST00000540865 AMPD2Q01433 879 aa5.04□□□□□ -1.6
SNHG1-214ENST00000540865 AKAP17AQ02040 695 aaKnown RBP5.04□□□□□ -1.6
SNHG1-214ENST00000540865 TNK2Q07912 1038 aa5.04□□□□□ -1.6
SNHG1-214ENST00000540865 PLD1Q13393 1074 aa5.04□□□□□ -1.6
SNHG1-214ENST00000540865 EPHA7Q15375 998 aa5.04□□□□□ -1.6
SNHG1-214ENST00000540865 UPP1Q16831 310 aa5.04□□□□□ -1.6
SNHG1-214ENST00000540865 FAM187BQ17R55 369 aa5.04□□□□□ -1.6
SNHG1-214ENST00000540865 FBXO43Q4G163 708 aa5.04□□□□□ -1.6
SNHG1-214ENST00000540865 USP39Q53GS9 565 aaKnown RBP5.04□□□□□ -1.6
SNHG1-214ENST00000540865 TTC22Q5TAA0 569 aa5.04□□□□□ -1.6
SNHG1-214ENST00000540865 CREB3L3Q68CJ9 461 aa5.04□□□□□ -1.6
SNHG1-214ENST00000540865 FSTL4Q6MZW2 842 aa5.04□□□□□ -1.6
SNHG1-214ENST00000540865 FDX2Q6P4F2 183 aa5.04□□□□□ -1.6
SNHG1-214ENST00000540865 Q6ZS46 218 aa5.04□□□□□ -1.6
SNHG1-214ENST00000540865 SYT13Q7L8C5 426 aa5.04□□□□□ -1.6
SNHG1-214ENST00000540865 CDR2LQ86X02 465 aaPredicted RBP5.04□□□□□ -1.6
SNHG1-214ENST00000540865 BPIFB1Q8TDL5 484 aa5.04□□□□□ -1.6
SNHG1-214ENST00000540865 GPBAR1Q8TDU6 330 aa5.04□□□□□ -1.6
SNHG1-214ENST00000540865 HNRNPLLQ8WVV9 542 aaKnown RBP5.04□□□□□ -1.6
SNHG1-214ENST00000540865 TP53INP1Q96A56 240 aa5.04□□□□□ -1.6
SNHG1-214ENST00000540865 EXOC4Q96A65 974 aa5.04□□□□□ -1.6
SNHG1-214ENST00000540865 FAM20AQ96MK3 541 aa5.04□□□□□ -1.6
SNHG1-214ENST00000540865 LRRC3BQ96PB8 259 aa5.04□□□□□ -1.6
SNHG1-214ENST00000540865 PPP1R10Q96QC0 940 aaKnown RBP5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms