RNA–Protein interactions for RNA: ENST00000540700.1

UBC-208, Transcript of ubiquitin C, humanhuman

TSL 2

Gene UBC, Length 627 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-208ENST00000540700 MRFAP1L1Q96HT8 127 aa17.68■□□□□ 0.42
UBC-208ENST00000540700 FUBP3Q96I24 572 aaKnown RBP eCLIP17.68■□□□□ 0.42
UBC-208ENST00000540700 KCNK16Q96T55 309 aa17.68■□□□□ 0.42
UBC-208ENST00000540700 SEPT5Q99719 369 aaPredicted RBP17.68■□□□□ 0.42
UBC-208ENST00000540700 PLEKHA4Q9H4M7 779 aa17.68■□□□□ 0.42
UBC-208ENST00000540700 TBC1D17Q9HA65 648 aa17.68■□□□□ 0.42
UBC-208ENST00000540700 ABCB6Q9NP58 842 aa17.68■□□□□ 0.42
UBC-208ENST00000540700 KRT82Q9NSB4 513 aa17.68■□□□□ 0.42
UBC-208ENST00000540700 WNT16Q9UBV4 365 aa17.68■□□□□ 0.42
UBC-208ENST00000540700 TSPAN16Q9UKR8 245 aa17.68■□□□□ 0.42
UBC-208ENST00000540700 DAAM1Q9Y4D1 1078 aa17.68■□□□□ 0.42
UBC-208ENST00000540700 PRRG1O14668 218 aa17.67■□□□□ 0.42
UBC-208ENST00000540700 ZMYND10O75800 440 aa17.67■□□□□ 0.42
UBC-208ENST00000540700 MICAL2O94851 1124 aa17.67■□□□□ 0.42
UBC-208ENST00000540700 TPM3P06753 285 aa17.67■□□□□ 0.42
UBC-208ENST00000540700 DCNP07585 359 aaKnown RBP17.67■□□□□ 0.42
UBC-208ENST00000540700 CYP11B1P15538 503 aa17.67■□□□□ 0.42
UBC-208ENST00000540700 GNA15P30679 374 aa17.67■□□□□ 0.42
UBC-208ENST00000540700 CASP14P31944 242 aa17.67■□□□□ 0.42
UBC-208ENST00000540700 STAT1P42224 750 aa17.67■□□□□ 0.42
UBC-208ENST00000540700 MAGEA11P43364 429 aa17.67■□□□□ 0.42
UBC-208ENST00000540700 SMARCB1Q12824 385 aa17.67■□□□□ 0.42
UBC-208ENST00000540700 PUM1Q14671 1186 aaKnown RBP eCLIP17.67■□□□□ 0.42
UBC-208ENST00000540700 MAPRE1Q15691 268 aaKnown RBP17.67■□□□□ 0.42
UBC-208ENST00000540700 GOLGA7BQ2TAP0 167 aa17.67■□□□□ 0.42
UBC-208ENST00000540700 SGO2Q562F6 1265 aa17.67■□□□□ 0.42
UBC-208ENST00000540700 C4orf50Q6ZRC1 276 aa17.67■□□□□ 0.42
UBC-208ENST00000540700 CLEC20AQ6ZU45 233 aa17.67■□□□□ 0.42
UBC-208ENST00000540700 TMC6Q7Z403 805 aa17.67■□□□□ 0.42
UBC-208ENST00000540700 IRF2BP2Q7Z5L9 587 aa17.67■□□□□ 0.42
UBC-208ENST00000540700 HDAC7Q8WUI4 952 aa17.67■□□□□ 0.42
UBC-208ENST00000540700 SLC20A1Q8WUM9 679 aa17.67■□□□□ 0.42
UBC-208ENST00000540700 CPLX3Q8WVH0 158 aa17.67■□□□□ 0.42
UBC-208ENST00000540700 ZNF606Q8WXB4 792 aa17.67■□□□□ 0.42
UBC-208ENST00000540700 SPAG5Q96R06 1193 aa17.67■□□□□ 0.42
UBC-208ENST00000540700 MED10Q9BTT4 135 aa17.67■□□□□ 0.42
UBC-208ENST00000540700 GRPEL1Q9HAV7 217 aa17.67■□□□□ 0.42
UBC-208ENST00000540700 NOCTQ9UK39 431 aaKnown RBP17.67■□□□□ 0.42
UBC-208ENST00000540700 CAPN11Q9UMQ6 739 aa17.67■□□□□ 0.42
UBC-208ENST00000540700 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.67■□□□□ 0.42
UBC-208ENST00000540700 A0A1W2PQJ5 194 aa17.66■□□□□ 0.42
UBC-208ENST00000540700 HHLA1C9JL84 531 aa17.66■□□□□ 0.42
UBC-208ENST00000540700 F8VP50 259 aa17.66■□□□□ 0.42
UBC-208ENST00000540700 CCL16O15467 120 aa17.66■□□□□ 0.42
UBC-208ENST00000540700 AP1G2O75843 785 aa17.66■□□□□ 0.42
UBC-208ENST00000540700 ADCY5O95622 1261 aa17.66■□□□□ 0.42
UBC-208ENST00000540700 ELF1P32519 619 aa17.66■□□□□ 0.42
UBC-208ENST00000540700 LIN9Q5TKA1 542 aa17.66■□□□□ 0.42
UBC-208ENST00000540700 DENND1BQ6P3S1 775 aa17.66■□□□□ 0.42
UBC-208ENST00000540700 LCLAT1Q6UWP7 414 aa17.66■□□□□ 0.42
UBC-208ENST00000540700 GPRIN1Q7Z2K8 1008 aa17.66■□□□□ 0.42
UBC-208ENST00000540700 CACNA2D4Q7Z3S7 1137 aa17.66■□□□□ 0.42
UBC-208ENST00000540700 SCN4BQ8IWT1 228 aa17.66■□□□□ 0.42
UBC-208ENST00000540700 UBA3Q8TBC4 463 aa17.66■□□□□ 0.42
UBC-208ENST00000540700 EPS8L1Q8TE68 723 aa17.66■□□□□ 0.42
UBC-208ENST00000540700 GIPC2Q8TF65 315 aa17.66■□□□□ 0.42
UBC-208ENST00000540700 NUP58Q9BVL2 599 aa17.66■□□□□ 0.42
UBC-208ENST00000540700 EDEM3Q9BZQ6 932 aa17.66■□□□□ 0.42
UBC-208ENST00000540700 CSNK1G1Q9HCP0 422 aa17.66■□□□□ 0.42
UBC-208ENST00000540700 HSFX1Q9UBD0 423 aa17.66■□□□□ 0.42
UBC-208ENST00000540700 MAFFQ9ULX9 164 aa17.66■□□□□ 0.42
UBC-208ENST00000540700 MTCL1Q9Y4B5 1905 aaKnown RBP17.65■□□□□ 0.42
UBC-208ENST00000540700 GOLGA6L3A6NEY3 463 aa17.65■□□□□ 0.42
UBC-208ENST00000540700 THAP12O43422 761 aa17.65■□□□□ 0.42
UBC-208ENST00000540700 CHRNB2P17787 502 aa17.65■□□□□ 0.42
UBC-208ENST00000540700 MAP3K7CLP57077 242 aa17.65■□□□□ 0.42
UBC-208ENST00000540700 ARID5AQ03989 594 aa17.65■□□□□ 0.42
UBC-208ENST00000540700 CNGA2Q16280 664 aa17.65■□□□□ 0.42
UBC-208ENST00000540700 PPM1LQ5SGD2 360 aa17.65■□□□□ 0.42
UBC-208ENST00000540700 SMYD5Q6GMV2 418 aa17.65■□□□□ 0.42
UBC-208ENST00000540700 SLC44A3Q8N4M1 653 aa17.65■□□□□ 0.42
UBC-208ENST00000540700 ST13P5Q8NFI4 369 aaPredicted RBP17.65■□□□□ 0.42
UBC-208ENST00000540700 SMARCD1Q96GM5 515 aa17.65■□□□□ 0.42
UBC-208ENST00000540700 SYT11Q9BT88 431 aa17.65■□□□□ 0.42
UBC-208ENST00000540700 DUSP16Q9BY84 665 aa17.65■□□□□ 0.42
UBC-208ENST00000540700 HCFC1R1Q9NWW0 138 aa17.65■□□□□ 0.42
UBC-208ENST00000540700 CYTH4Q9UIA0 394 aa17.65■□□□□ 0.42
UBC-208ENST00000540700 KIAA1257Q9ULG3 409 aa17.65■□□□□ 0.42
UBC-208ENST00000540700 MYO6Q9UM54 1294 aa17.65■□□□□ 0.42
UBC-208ENST00000540700 CCDC195A0A1B0GUA6 201 aa17.64■□□□□ 0.41
UBC-208ENST00000540700 FAM170AA1A519 330 aa17.64■□□□□ 0.41
UBC-208ENST00000540700 TNFRSF10BO14763 440 aa17.64■□□□□ 0.41
UBC-208ENST00000540700 GABBR2O75899 941 aa17.64■□□□□ 0.41
UBC-208ENST00000540700 KRT37O76014 449 aa17.64■□□□□ 0.41
UBC-208ENST00000540700 MMEP08473 750 aa17.64■□□□□ 0.41
UBC-208ENST00000540700 FAM200BP0CF97 657 aa17.64■□□□□ 0.41
UBC-208ENST00000540700 SP9P0CG40 484 aa17.64■□□□□ 0.41
UBC-208ENST00000540700 GRIK1P39086 918 aa17.64■□□□□ 0.41
UBC-208ENST00000540700 TUFMP49411 452 aaKnown RBP17.64■□□□□ 0.41
UBC-208ENST00000540700 USP46P62068 366 aa17.64■□□□□ 0.41
UBC-208ENST00000540700 NTHL1P78549 312 aa17.64■□□□□ 0.41
UBC-208ENST00000540700 PDE4CQ08493 712 aa17.64■□□□□ 0.41
UBC-208ENST00000540700 TAF3Q5VWG9 929 aa17.64■□□□□ 0.41
UBC-208ENST00000540700 ZC3H14Q6PJT7 736 aaKnown RBP17.64■□□□□ 0.41
UBC-208ENST00000540700 VSTM1Q6UX27 236 aa17.64■□□□□ 0.41
UBC-208ENST00000540700 HS6ST3Q8IZP7 471 aa17.64■□□□□ 0.41
UBC-208ENST00000540700 WDTC1Q8N5D0 677 aa17.64■□□□□ 0.41
UBC-208ENST00000540700 ANKRD52Q8NB46 1076 aa17.64■□□□□ 0.41
UBC-208ENST00000540700 CMASQ8NFW8 434 aaPredicted RBP17.64■□□□□ 0.41
UBC-208ENST00000540700 RUBCNQ92622 972 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms