RNA–Protein interactions for RNA: ENST00000540452.1

C2CD3-215, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 3

Gene C2CD3, Length 430 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-215ENST00000540452 AGO3Q9H9G7 860 aaKnown RBP8.71□□□□□ -1.02
C2CD3-215ENST00000540452 PPCSQ9HAB8 311 aa8.71□□□□□ -1.02
C2CD3-215ENST00000540452 CSNK1G1Q9HCP0 422 aa8.71□□□□□ -1.02
C2CD3-215ENST00000540452 STARD7Q9NQZ5 370 aa8.71□□□□□ -1.02
C2CD3-215ENST00000540452 CHORDC1Q9UHD1 332 aaPredicted RBP8.71□□□□□ -1.02
C2CD3-215ENST00000540452 NEU2Q9Y3R4 380 aa8.71□□□□□ -1.02
C2CD3-215ENST00000540452 NR2E1Q9Y466 385 aa8.71□□□□□ -1.02
C2CD3-215ENST00000540452 SF3B1O75533 1304 aaKnown RBP eCLIP8.71□□□□□ -1.02
C2CD3-215ENST00000540452 GOLGA6L10A6NI86 522 aa8.7□□□□□ -1.02
C2CD3-215ENST00000540452 PAPSS1O43252 624 aaPredicted RBP8.7□□□□□ -1.02
C2CD3-215ENST00000540452 DAPK3O43293 454 aa8.7□□□□□ -1.02
C2CD3-215ENST00000540452 TRAPPC3O43617 180 aa8.7□□□□□ -1.02
C2CD3-215ENST00000540452 LIASO43766 372 aa8.7□□□□□ -1.02
C2CD3-215ENST00000540452 DAB1O75553 588 aa8.7□□□□□ -1.02
C2CD3-215ENST00000540452 ZMYND10O75800 440 aa8.7□□□□□ -1.02
C2CD3-215ENST00000540452 TRUB2O95900 331 aaKnown RBP8.7□□□□□ -1.02
C2CD3-215ENST00000540452 CTSHP09668 335 aa8.7□□□□□ -1.02
C2CD3-215ENST00000540452 FAM200BP0CF97 657 aa8.7□□□□□ -1.02
C2CD3-215ENST00000540452 GHRP10912 638 aa8.7□□□□□ -1.02
C2CD3-215ENST00000540452 RARGP13631 454 aa8.7□□□□□ -1.02
C2CD3-215ENST00000540452 SELPP16109 830 aa8.7□□□□□ -1.02
C2CD3-215ENST00000540452 TGM2P21980 687 aa8.7□□□□□ -1.02
C2CD3-215ENST00000540452 OAS2P29728 719 aaKnown RBP8.7□□□□□ -1.02
C2CD3-215ENST00000540452 CD52P31358 61 aa8.7□□□□□ -1.02
C2CD3-215ENST00000540452 STIP1P31948 543 aaKnown RBP8.7□□□□□ -1.02
C2CD3-215ENST00000540452 VCPP55072 806 aaKnown RBP8.7□□□□□ -1.02
C2CD3-215ENST00000540452 DSC1Q08554 894 aa8.7□□□□□ -1.02
C2CD3-215ENST00000540452 SMARCB1Q12824 385 aa8.7□□□□□ -1.02
C2CD3-215ENST00000540452 BYSLQ13895 437 aaKnown RBP8.7□□□□□ -1.02
C2CD3-215ENST00000540452 PPP1R7Q15435 360 aa8.7□□□□□ -1.02
C2CD3-215ENST00000540452 OASLQ15646 514 aaKnown RBP8.7□□□□□ -1.02
C2CD3-215ENST00000540452 RAB41Q5JT25 222 aa8.7□□□□□ -1.02
C2CD3-215ENST00000540452 ZNF618Q5T7W0 954 aa8.7□□□□□ -1.02
C2CD3-215ENST00000540452 OR6B2Q6IFH4 312 aa8.7□□□□□ -1.02
C2CD3-215ENST00000540452 TTC27Q6P3X3 843 aa8.7□□□□□ -1.02
C2CD3-215ENST00000540452 TRAF7Q6Q0C0 670 aa8.7□□□□□ -1.02
C2CD3-215ENST00000540452 GLB1LQ6UWU2 654 aa8.7□□□□□ -1.02
C2CD3-215ENST00000540452 ZNF365Q70YC5 407 aa8.7□□□□□ -1.02
C2CD3-215ENST00000540452 BZW1Q7L1Q6 419 aaKnown RBP8.7□□□□□ -1.02
C2CD3-215ENST00000540452 BNIPLQ7Z465 357 aa8.7□□□□□ -1.02
C2CD3-215ENST00000540452 ZDHHC14Q8IZN3 488 aa8.7□□□□□ -1.02
C2CD3-215ENST00000540452 C12orf29Q8N999 325 aa8.7□□□□□ -1.02
C2CD3-215ENST00000540452 JOSD2Q8TAC2 188 aa8.7□□□□□ -1.02
C2CD3-215ENST00000540452 SLC35B2Q8TB61 432 aa8.7□□□□□ -1.02
C2CD3-215ENST00000540452 MYCBPAPQ8TBZ2 947 aa8.7□□□□□ -1.02
C2CD3-215ENST00000540452 URGCPQ8TCY9 931 aa8.7□□□□□ -1.02
C2CD3-215ENST00000540452 RXFP2Q8WXD0 754 aa8.7□□□□□ -1.02
C2CD3-215ENST00000540452 EXOC4Q96A65 974 aa8.7□□□□□ -1.02
C2CD3-215ENST00000540452 FAF2Q96CS3 445 aa8.7□□□□□ -1.02
C2CD3-215ENST00000540452 SMARCD1Q96GM5 515 aa8.7□□□□□ -1.02
C2CD3-215ENST00000540452 CEP295NLQ96MC4 621 aa8.7□□□□□ -1.02
C2CD3-215ENST00000540452 ZFP42Q96MM3 310 aa8.7□□□□□ -1.02
C2CD3-215ENST00000540452 GAD1Q99259 594 aa8.7□□□□□ -1.02
C2CD3-215ENST00000540452 ADAM2Q99965 735 aa8.7□□□□□ -1.02
C2CD3-215ENST00000540452 TMEM109Q9BVC6 243 aa8.7□□□□□ -1.02
C2CD3-215ENST00000540452 FRMD8Q9BZ67 464 aaPredicted RBP8.7□□□□□ -1.02
C2CD3-215ENST00000540452 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.7□□□□□ -1.02
C2CD3-215ENST00000540452 PABPC3Q9H361 631 aaKnown RBP8.7□□□□□ -1.02
C2CD3-215ENST00000540452 PCDH9Q9HC56 1237 aa8.7□□□□□ -1.02
C2CD3-215ENST00000540452 PAK6Q9NQU5 681 aaPredicted RBP8.7□□□□□ -1.02
C2CD3-215ENST00000540452 CNGB3Q9NQW8 809 aa8.7□□□□□ -1.02
C2CD3-215ENST00000540452 ST7Q9NRC1 585 aa8.7□□□□□ -1.02
C2CD3-215ENST00000540452 TMEM161AQ9NX61 479 aa8.7□□□□□ -1.02
C2CD3-215ENST00000540452 GRHL1Q9NZI5 618 aa8.7□□□□□ -1.02
C2CD3-215ENST00000540452 KLK14Q9P0G3 267 aa8.7□□□□□ -1.02
C2CD3-215ENST00000540452 STAP1Q9ULZ2 295 aa8.7□□□□□ -1.02
C2CD3-215ENST00000540452 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.69□□□□□ -1.02
C2CD3-215ENST00000540452 ESYT3A0FGR9 886 aa8.69□□□□□ -1.02
C2CD3-215ENST00000540452 LRRD1A4D1F6 860 aa8.69□□□□□ -1.02
C2CD3-215ENST00000540452 ZSCAN5CA6NGD5 496 aaPredicted RBP8.69□□□□□ -1.02
C2CD3-215ENST00000540452 HMGB1P1B2RPK0 211 aaPredicted RBP8.69□□□□□ -1.02
C2CD3-215ENST00000540452 GOLGA8SH3BPF8 625 aa8.69□□□□□ -1.02
C2CD3-215ENST00000540452 AGPSO00116 658 aa8.69□□□□□ -1.02
C2CD3-215ENST00000540452 SYN3O14994 580 aa8.69□□□□□ -1.02
C2CD3-215ENST00000540452 EIF3HO15372 352 aaKnown RBP eCLIP8.69□□□□□ -1.02
C2CD3-215ENST00000540452 SYF2O95926 243 aaKnown RBP8.69□□□□□ -1.02
C2CD3-215ENST00000540452 FGFR1P11362 822 aa8.69□□□□□ -1.02
C2CD3-215ENST00000540452 ATF2P15336 505 aa8.69□□□□□ -1.02
C2CD3-215ENST00000540452 IVDP26440 423 aa8.69□□□□□ -1.02
C2CD3-215ENST00000540452 MIPP30301 263 aa8.69□□□□□ -1.02
C2CD3-215ENST00000540452 HTR7P34969 479 aa8.69□□□□□ -1.02
C2CD3-215ENST00000540452 NOS2P35228 1153 aa8.69□□□□□ -1.02
C2CD3-215ENST00000540452 MATKP42679 507 aa8.69□□□□□ -1.02
C2CD3-215ENST00000540452 SSR1P43307 286 aaKnown RBP8.69□□□□□ -1.02
C2CD3-215ENST00000540452 RPL21P46778 160 aaKnown RBP8.69□□□□□ -1.02
C2CD3-215ENST00000540452 NR2C2P49116 596 aa8.69□□□□□ -1.02
C2CD3-215ENST00000540452 ARSEP51690 589 aa8.69□□□□□ -1.02
C2CD3-215ENST00000540452 MRPS5P82675 430 aaKnown RBP8.69□□□□□ -1.02
C2CD3-215ENST00000540452 CAP1Q01518 475 aa8.69□□□□□ -1.02
C2CD3-215ENST00000540452 KRT17Q04695 432 aa8.69□□□□□ -1.02
C2CD3-215ENST00000540452 DPYSL2Q16555 572 aa8.69□□□□□ -1.02
C2CD3-215ENST00000540452 PTPROQ16827 1216 aa8.69□□□□□ -1.02
C2CD3-215ENST00000540452 SLC25A52Q3SY17 297 aa8.69□□□□□ -1.02
C2CD3-215ENST00000540452 C2CD6Q53TS8 623 aa8.69□□□□□ -1.02
C2CD3-215ENST00000540452 HABP4Q5JVS0 413 aaKnown RBP8.69□□□□□ -1.02
C2CD3-215ENST00000540452 ACBD5Q5T8D3 534 aaPredicted RBP8.69□□□□□ -1.02
C2CD3-215ENST00000540452 LLGL2Q6P1M3 1020 aa8.69□□□□□ -1.02
C2CD3-215ENST00000540452 FAM171BQ6P995 826 aa8.69□□□□□ -1.02
C2CD3-215ENST00000540452 RHBDF2Q6PJF5 856 aa8.69□□□□□ -1.02
C2CD3-215ENST00000540452 ZDHHC24Q6UX98 284 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms