RNA–Protein interactions for RNA: ENST00000540230.5

UBE3B-212, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,541 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-212ENST00000540230 JAKMIP2Q96AA8 810 aa15.96■□□□□ 0.15
UBE3B-212ENST00000540230 LTB4R2Q9NPC1 389 aa15.96■□□□□ 0.15
UBE3B-212ENST00000540230 GTSE1Q9NYZ3 720 aa15.96■□□□□ 0.15
UBE3B-212ENST00000540230 IL37Q9NZH6 218 aa15.96■□□□□ 0.15
UBE3B-212ENST00000540230 TRPM5Q9NZQ8 1165 aa15.96■□□□□ 0.15
UBE3B-212ENST00000540230 SIT1Q9Y3P8 196 aa15.96■□□□□ 0.15
UBE3B-212ENST00000540230 USP34Q70CQ2 3546 aa15.96■□□□□ 0.15
UBE3B-212ENST00000540230 VPS13AQ96RL7 3174 aa15.95■□□□□ 0.14
UBE3B-212ENST00000540230 TRAV19A0A0A6YYK7 116 aa15.95■□□□□ 0.14
UBE3B-212ENST00000540230 SOBPA7XYQ1 873 aa15.95■□□□□ 0.14
UBE3B-212ENST00000540230 GALR2O43603 387 aaPredicted RBP15.95■□□□□ 0.14
UBE3B-212ENST00000540230 ABL1P00519 1130 aa15.95■□□□□ 0.14
UBE3B-212ENST00000540230 AFPP02771 609 aaKnown RBP15.95■□□□□ 0.14
UBE3B-212ENST00000540230 FAM200BP0CF97 657 aa15.95■□□□□ 0.14
UBE3B-212ENST00000540230 YWHAQP27348 245 aa15.95■□□□□ 0.14
UBE3B-212ENST00000540230 USP4Q13107 963 aa15.95■□□□□ 0.14
UBE3B-212ENST00000540230 ZNF77Q15935 545 aa15.95■□□□□ 0.14
UBE3B-212ENST00000540230 ARHGAP29Q52LW3 1261 aa15.95■□□□□ 0.14
UBE3B-212ENST00000540230 ARHGEF19Q8IW93 802 aa15.95■□□□□ 0.14
UBE3B-212ENST00000540230 TTC16Q8NEE8 873 aa15.95■□□□□ 0.14
UBE3B-212ENST00000540230 FBXO32Q969P5 355 aa15.95■□□□□ 0.14
UBE3B-212ENST00000540230 TMEM176AQ96HP8 235 aa15.95■□□□□ 0.14
UBE3B-212ENST00000540230 SHDQ96IW2 340 aa15.95■□□□□ 0.14
UBE3B-212ENST00000540230 HEXIM2Q96MH2 286 aaKnown RBP15.95■□□□□ 0.14
UBE3B-212ENST00000540230 RNF38Q9H0F5 515 aa15.95■□□□□ 0.14
UBE3B-212ENST00000540230 KCNH6Q9H252 994 aa15.95■□□□□ 0.14
UBE3B-212ENST00000540230 CHORDC1Q9UHD1 332 aaPredicted RBP15.95■□□□□ 0.14
UBE3B-212ENST00000540230 ARIH1Q9Y4X5 557 aaPredicted RBP15.95■□□□□ 0.14
UBE3B-212ENST00000540230 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.95■□□□□ 0.14
UBE3B-212ENST00000540230 PIAS3Q9Y6X2 628 aa15.95■□□□□ 0.14
UBE3B-212ENST00000540230 FAM92AA1XBS5 289 aa15.94■□□□□ 0.14
UBE3B-212ENST00000540230 RTN3O95197 1032 aaPredicted RBP15.94■□□□□ 0.14
UBE3B-212ENST00000540230 OAS1P00973 400 aaKnown RBP15.94■□□□□ 0.14
UBE3B-212ENST00000540230 USP17L7P0C7H9 530 aa15.94■□□□□ 0.14
UBE3B-212ENST00000540230 CCDC192P0DO97 292 aa15.94■□□□□ 0.14
UBE3B-212ENST00000540230 HDCP19113 662 aa15.94■□□□□ 0.14
UBE3B-212ENST00000540230 ZNF268Q14587 947 aaPredicted RBP15.94■□□□□ 0.14
UBE3B-212ENST00000540230 ZNF687Q8N1G0 1237 aa15.94■□□□□ 0.14
UBE3B-212ENST00000540230 NT5C1BQ96P26 610 aa15.94■□□□□ 0.14
UBE3B-212ENST00000540230 SLITRK1Q96PX8 696 aa15.94■□□□□ 0.14
UBE3B-212ENST00000540230 FAM83CQ9BQN1 747 aa15.94■□□□□ 0.14
UBE3B-212ENST00000540230 KIF9Q9HAQ2 790 aa15.94■□□□□ 0.14
UBE3B-212ENST00000540230 HPS4Q9NQG7 708 aa15.94■□□□□ 0.14
UBE3B-212ENST00000540230 GKN1Q9NS71 199 aa15.94■□□□□ 0.14
UBE3B-212ENST00000540230 EHD2Q9NZN4 543 aa15.94■□□□□ 0.14
UBE3B-212ENST00000540230 GMIPQ9P107 970 aa15.94■□□□□ 0.14
UBE3B-212ENST00000540230 CACNA1HO95180 2353 aa15.94■□□□□ 0.14
UBE3B-212ENST00000540230 OTOL1A6NHN0 477 aaPredicted RBP15.94■□□□□ 0.14
UBE3B-212ENST00000540230 FAM170BA6NMN3 283 aa15.94■□□□□ 0.14
UBE3B-212ENST00000540230 H0Y858 1186 aa15.94■□□□□ 0.14
UBE3B-212ENST00000540230 P4HA2O15460 535 aa15.94■□□□□ 0.14
UBE3B-212ENST00000540230 OLFM2O95897 454 aa15.94■□□□□ 0.14
UBE3B-212ENST00000540230 ARSAP15289 507 aa15.94■□□□□ 0.14
UBE3B-212ENST00000540230 ACO1P21399 889 aaKnown RBP15.94■□□□□ 0.14
UBE3B-212ENST00000540230 NHLH1Q02575 133 aa15.94■□□□□ 0.14
UBE3B-212ENST00000540230 FZD5Q13467 585 aa15.94■□□□□ 0.14
UBE3B-212ENST00000540230 MTF1Q14872 753 aa15.94■□□□□ 0.14
UBE3B-212ENST00000540230 TXNDC11Q6PKC3 985 aa15.94■□□□□ 0.14
UBE3B-212ENST00000540230 RBM43Q6ZSC3 357 aaKnown RBP15.94■□□□□ 0.14
UBE3B-212ENST00000540230 RRAGAQ7L523 313 aa15.94■□□□□ 0.14
UBE3B-212ENST00000540230 CREBRFQ8IUR6 639 aa15.94■□□□□ 0.14
UBE3B-212ENST00000540230 PPM1KQ8N3J5 372 aa15.94■□□□□ 0.14
UBE3B-212ENST00000540230 DTWD2Q8NBA8 298 aa15.94■□□□□ 0.14
UBE3B-212ENST00000540230 CSGALNACT1Q8TDX6 532 aa15.94■□□□□ 0.14
UBE3B-212ENST00000540230 SH3RF2Q8TEC5 729 aa15.94■□□□□ 0.14
UBE3B-212ENST00000540230 CHFRQ96EP1 664 aa15.94■□□□□ 0.14
UBE3B-212ENST00000540230 NDRG2Q9UN36 371 aaKnown RBP15.94■□□□□ 0.14
UBE3B-212ENST00000540230 RNF225M0QZC1 329 aaPredicted RBP15.93■□□□□ 0.14
UBE3B-212ENST00000540230 FGFR1OPO95684 399 aaKnown RBP15.93■□□□□ 0.14
UBE3B-212ENST00000540230 CALCAP01258 141 aa15.93■□□□□ 0.14
UBE3B-212ENST00000540230 ZDHHC11BP0C7U3 371 aa15.93■□□□□ 0.14
UBE3B-212ENST00000540230 HSP90AA4PQ58FG1 418 aa15.93■□□□□ 0.14
UBE3B-212ENST00000540230 ARHGAP17Q68EM7 881 aa15.93■□□□□ 0.14
UBE3B-212ENST00000540230 ZNF852Q6ZMS4 543 aa15.93■□□□□ 0.14
UBE3B-212ENST00000540230 TTC30AQ86WT1 665 aa15.93■□□□□ 0.14
UBE3B-212ENST00000540230 TTC39CQ8N584 583 aa15.93■□□□□ 0.14
UBE3B-212ENST00000540230 EHBP1Q8NDI1 1231 aa15.93■□□□□ 0.14
UBE3B-212ENST00000540230 KREMEN1Q96MU8 473 aa15.93■□□□□ 0.14
UBE3B-212ENST00000540230 PHOX2BQ99453 314 aa15.93■□□□□ 0.14
UBE3B-212ENST00000540230 DUSP16Q9BY84 665 aa15.93■□□□□ 0.14
UBE3B-212ENST00000540230 INTS2Q9H0H0 1204 aaKnown RBP15.93■□□□□ 0.14
UBE3B-212ENST00000540230 EBF3Q9H4W6 596 aa15.93■□□□□ 0.14
UBE3B-212ENST00000540230 CCSER2Q9H7U1 834 aa15.93■□□□□ 0.14
UBE3B-212ENST00000540230 FAM86C1Q9NVL1 165 aa15.93■□□□□ 0.14
UBE3B-212ENST00000540230 SMPD4Q9NXE4 827 aa15.93■□□□□ 0.14
UBE3B-212ENST00000540230 ARHGAP26Q9UNA1 814 aa15.93■□□□□ 0.14
UBE3B-212ENST00000540230 WNT6Q9Y6F9 365 aa15.93■□□□□ 0.14
UBE3B-212ENST00000540230 TULP2O00295 520 aa15.92■□□□□ 0.14
UBE3B-212ENST00000540230 SCAMP3O14828 347 aaKnown RBP15.92■□□□□ 0.14
UBE3B-212ENST00000540230 CYP26A1O43174 497 aa15.92■□□□□ 0.14
UBE3B-212ENST00000540230 TRIM21P19474 475 aaKnown RBP15.92■□□□□ 0.14
UBE3B-212ENST00000540230 TBXAS1P24557 533 aaPredicted RBP15.92■□□□□ 0.14
UBE3B-212ENST00000540230 CTHP32929 405 aa15.92■□□□□ 0.14
UBE3B-212ENST00000540230 PLA2G5P39877 138 aa15.92■□□□□ 0.14
UBE3B-212ENST00000540230 PPP3CCP48454 512 aa15.92■□□□□ 0.14
UBE3B-212ENST00000540230 KPNA1P52294 538 aaPredicted RBP15.92■□□□□ 0.14
UBE3B-212ENST00000540230 PLCB2Q00722 1185 aa15.92■□□□□ 0.14
UBE3B-212ENST00000540230 APBA1Q02410 837 aa15.92■□□□□ 0.14
UBE3B-212ENST00000540230 OVCA2Q8WZ82 227 aa15.92■□□□□ 0.14
UBE3B-212ENST00000540230 FAM3CQ92520 227 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms