RNA–Protein interactions for RNA: ENST00000539687.5

SPARC-209, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 511 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-209ENST00000539687 OLFML1Q6UWY5 402 aa10.66□□□□□ -0.7
SPARC-209ENST00000539687 C4orf22Q6V702 233 aa10.66□□□□□ -0.7
SPARC-209ENST00000539687 SLC26A9Q7LBE3 791 aa10.66□□□□□ -0.7
SPARC-209ENST00000539687 MRPL10Q7Z7H8 261 aaKnown RBP10.66□□□□□ -0.7
SPARC-209ENST00000539687 ALLCQ8N6M5 410 aa10.66□□□□□ -0.7
SPARC-209ENST00000539687 JOSD2Q8TAC2 188 aa10.66□□□□□ -0.7
SPARC-209ENST00000539687 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.66□□□□□ -0.7
SPARC-209ENST00000539687 PXYLP1Q8TE99 480 aa10.66□□□□□ -0.7
SPARC-209ENST00000539687 RXFP2Q8WXD0 754 aa10.66□□□□□ -0.7
SPARC-209ENST00000539687 HAUS1Q96CS2 278 aa10.66□□□□□ -0.7
SPARC-209ENST00000539687 CAPNS2Q96L46 248 aa10.66□□□□□ -0.7
SPARC-209ENST00000539687 HNRNPABQ99729 332 aaKnown RBP10.66□□□□□ -0.7
SPARC-209ENST00000539687 TSEN34Q9BSV6 310 aaKnown RBP10.66□□□□□ -0.7
SPARC-209ENST00000539687 TRIM62Q9BVG3 475 aa10.66□□□□□ -0.7
SPARC-209ENST00000539687 MCOLN1Q9GZU1 580 aa10.66□□□□□ -0.7
SPARC-209ENST00000539687 CNOT10Q9H9A5 744 aaKnown RBP10.66□□□□□ -0.7
SPARC-209ENST00000539687 SHOC2Q9UQ13 582 aa10.66□□□□□ -0.7
SPARC-209ENST00000539687 NEU2Q9Y3R4 380 aa10.66□□□□□ -0.7
SPARC-209ENST00000539687 SCN10AQ9Y5Y9 1956 aa10.66□□□□□ -0.7
SPARC-209ENST00000539687 MYADML2A6NDP7 307 aa10.65□□□□□ -0.7
SPARC-209ENST00000539687 H0YGN5 161 aa10.65□□□□□ -0.7
SPARC-209ENST00000539687 APOC4-APOC2K7ER74 178 aa10.65□□□□□ -0.7
SPARC-209ENST00000539687 CYB561D2O14569 222 aa10.65□□□□□ -0.7
SPARC-209ENST00000539687 SHOX2O60902 331 aaPredicted RBP10.65□□□□□ -0.7
SPARC-209ENST00000539687 FBXO21O94952 628 aa10.65□□□□□ -0.7
SPARC-209ENST00000539687 GJB6O95452 261 aa10.65□□□□□ -0.7
SPARC-209ENST00000539687 PGK1P00558 417 aa10.65□□□□□ -0.7
SPARC-209ENST00000539687 APOC2P02655 101 aa10.65□□□□□ -0.7
SPARC-209ENST00000539687 ASGR1P07306 291 aa10.65□□□□□ -0.7
SPARC-209ENST00000539687 PFKMP08237 780 aa10.65□□□□□ -0.7
SPARC-209ENST00000539687 NR1D1P20393 614 aa10.65□□□□□ -0.7
SPARC-209ENST00000539687 TGM2P21980 687 aa10.65□□□□□ -0.7
SPARC-209ENST00000539687 PCSK1P29120 753 aa10.65□□□□□ -0.7
SPARC-209ENST00000539687 CTGFP29279 349 aa10.65□□□□□ -0.7
SPARC-209ENST00000539687 STIP1P31948 543 aaKnown RBP10.65□□□□□ -0.7
SPARC-209ENST00000539687 ACTN2P35609 894 aa10.65□□□□□ -0.7
SPARC-209ENST00000539687 AIF1P55008 147 aa10.65□□□□□ -0.7
SPARC-209ENST00000539687 PLCB3Q01970 1234 aa10.65□□□□□ -0.7
SPARC-209ENST00000539687 CACNB2Q08289 660 aaPredicted RBP10.65□□□□□ -0.7
SPARC-209ENST00000539687 PDE4CQ08493 712 aa10.65□□□□□ -0.7
SPARC-209ENST00000539687 ORC1Q13415 861 aa10.65□□□□□ -0.7
SPARC-209ENST00000539687 KRT81Q14533 505 aa10.65□□□□□ -0.7
SPARC-209ENST00000539687 UAP1Q16222 522 aaPredicted RBP10.65□□□□□ -0.7
SPARC-209ENST00000539687 KRT71Q3SY84 523 aa10.65□□□□□ -0.7
SPARC-209ENST00000539687 IZUMO3Q5VZ72 239 aa10.65□□□□□ -0.7
SPARC-209ENST00000539687 KAZNQ674X7 775 aa10.65□□□□□ -0.7
SPARC-209ENST00000539687 CYP4F22Q6NT55 531 aa10.65□□□□□ -0.7
SPARC-209ENST00000539687 RHBDF2Q6PJF5 856 aa10.65□□□□□ -0.7
SPARC-209ENST00000539687 BZW1Q7L1Q6 419 aaKnown RBP10.65□□□□□ -0.7
SPARC-209ENST00000539687 STRADAQ7RTN6 431 aa10.65□□□□□ -0.7
SPARC-209ENST00000539687 TTC30AQ86WT1 665 aa10.65□□□□□ -0.7
SPARC-209ENST00000539687 METTL23Q86XA0 190 aa10.65□□□□□ -0.7
SPARC-209ENST00000539687 RFX6Q8HWS3 928 aa10.65□□□□□ -0.7
SPARC-209ENST00000539687 ZCCHC9Q8N567 271 aaKnown RBP10.65□□□□□ -0.7
SPARC-209ENST00000539687 B3GALNT2Q8NCR0 500 aa10.65□□□□□ -0.7
SPARC-209ENST00000539687 SLC35B2Q8TB61 432 aa10.65□□□□□ -0.7
SPARC-209ENST00000539687 KBTBD7Q8WVZ9 684 aa10.65□□□□□ -0.7
SPARC-209ENST00000539687 RIN2Q8WYP3 895 aaPredicted RBP10.65□□□□□ -0.7
SPARC-209ENST00000539687 KCTD13Q8WZ19 329 aa10.65□□□□□ -0.7
SPARC-209ENST00000539687 RAPGEF5Q92565 580 aa10.65□□□□□ -0.7
SPARC-209ENST00000539687 PGM2Q96G03 612 aa10.65□□□□□ -0.7
SPARC-209ENST00000539687 DCBLD2Q96PD2 775 aa10.65□□□□□ -0.7
SPARC-209ENST00000539687 ZNF670Q9BS34 389 aa10.65□□□□□ -0.7
SPARC-209ENST00000539687 CAPS2Q9BXY5 557 aa10.65□□□□□ -0.7
SPARC-209ENST00000539687 FRMD8Q9BZ67 464 aaPredicted RBP10.65□□□□□ -0.7
SPARC-209ENST00000539687 ZWILCHQ9H900 591 aa10.65□□□□□ -0.7
SPARC-209ENST00000539687 KLK14Q9P0G3 267 aa10.65□□□□□ -0.7
SPARC-209ENST00000539687 RCOR3Q9P2K3 495 aaPredicted RBP10.65□□□□□ -0.7
SPARC-209ENST00000539687 SRRDQ9UH36 339 aa10.65□□□□□ -0.7
SPARC-209ENST00000539687 DDX20Q9UHI6 824 aaKnown RBP10.65□□□□□ -0.7
SPARC-209ENST00000539687 CDH9Q9ULB4 789 aa10.65□□□□□ -0.7
SPARC-209ENST00000539687 TPX2Q9ULW0 747 aaKnown RBP10.65□□□□□ -0.7
SPARC-209ENST00000539687 STAP1Q9ULZ2 295 aa10.65□□□□□ -0.7
SPARC-209ENST00000539687 GABRQQ9UN88 632 aa10.65□□□□□ -0.7
SPARC-209ENST00000539687 NFS1Q9Y697 457 aa10.65□□□□□ -0.7
SPARC-209ENST00000539687 PTCH2Q9Y6C5 1203 aa10.65□□□□□ -0.7
SPARC-209ENST00000539687 PI4K2BG5E9Z4 385 aa10.64□□□□□ -0.71
SPARC-209ENST00000539687 DNALI1O14645 258 aaPredicted RBP10.64□□□□□ -0.71
SPARC-209ENST00000539687 PTGESO14684 152 aa10.64□□□□□ -0.71
SPARC-209ENST00000539687 GABRDO14764 452 aa10.64□□□□□ -0.71
SPARC-209ENST00000539687 EIF3HO15372 352 aaKnown RBP eCLIP10.64□□□□□ -0.71
SPARC-209ENST00000539687 RIPK2O43353 540 aa10.64□□□□□ -0.71
SPARC-209ENST00000539687 CST8O60676 142 aa10.64□□□□□ -0.71
SPARC-209ENST00000539687 ENDOD1O94919 500 aa10.64□□□□□ -0.71
SPARC-209ENST00000539687 AGTP01019 485 aa10.64□□□□□ -0.71
SPARC-209ENST00000539687 ABHD2P08910 425 aa10.64□□□□□ -0.71
SPARC-209ENST00000539687 ODC1P11926 461 aa10.64□□□□□ -0.71
SPARC-209ENST00000539687 KLRC2P26717 231 aa10.64□□□□□ -0.71
SPARC-209ENST00000539687 THPOP40225 353 aa10.64□□□□□ -0.71
SPARC-209ENST00000539687 ITGA8P53708 1063 aa10.64□□□□□ -0.71
SPARC-209ENST00000539687 GRIK3Q13003 919 aa10.64□□□□□ -0.71
SPARC-209ENST00000539687 OASLQ15646 514 aaKnown RBP10.64□□□□□ -0.71
SPARC-209ENST00000539687 MAPRE1Q15691 268 aaKnown RBP10.64□□□□□ -0.71
SPARC-209ENST00000539687 KCNA10Q16322 511 aa10.64□□□□□ -0.71
SPARC-209ENST00000539687 TTMPQ5BVD1 217 aa10.64□□□□□ -0.71
SPARC-209ENST00000539687 MAP3K21Q5TCX8 1036 aa10.64□□□□□ -0.71
SPARC-209ENST00000539687 CCSAPQ6IQ19 270 aaPredicted RBP10.64□□□□□ -0.71
SPARC-209ENST00000539687 DSTYKQ6XUX3 929 aa10.64□□□□□ -0.71
SPARC-209ENST00000539687 PPP1R21Q6ZMI0 780 aa10.64□□□□□ -0.71
SPARC-209ENST00000539687 TAOK1Q7L7X3 1001 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms