RNA–Protein interactions for RNA: ENST00000539599.5

UBE3B-210, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best)

Gene UBE3B, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-210ENST00000539599 ARL4CP56559 192 aa14.71□□□□□ -0.06
UBE3B-210ENST00000539599 FAAP100Q0VG06 881 aa14.71□□□□□ -0.06
UBE3B-210ENST00000539599 DPYSL3Q14195 570 aa14.71□□□□□ -0.06
UBE3B-210ENST00000539599 TAF1BQ53T94 588 aaPredicted RBP14.71□□□□□ -0.06
UBE3B-210ENST00000539599 MTDHQ86UE4 582 aaKnown RBP14.71□□□□□ -0.06
UBE3B-210ENST00000539599 MZB1Q8WU39 189 aa14.71□□□□□ -0.06
UBE3B-210ENST00000539599 C10orf82Q8WW14 230 aa14.71□□□□□ -0.06
UBE3B-210ENST00000539599 TTC25Q96NG3 672 aa14.71□□□□□ -0.06
UBE3B-210ENST00000539599 NGRNQ9NPE2 291 aaKnown RBP14.71□□□□□ -0.06
UBE3B-210ENST00000539599 AKT3Q9Y243 479 aa14.71□□□□□ -0.06
UBE3B-210ENST00000539599 ACTL7BQ9Y614 415 aa14.71□□□□□ -0.06
UBE3B-210ENST00000539599 IGKV6-21A0A0C4DH24 114 aa14.7□□□□□ -0.06
UBE3B-210ENST00000539599 A0A0G2JND7 137 aa14.7□□□□□ -0.06
UBE3B-210ENST00000539599 H0Y3Z8 333 aa14.7□□□□□ -0.06
UBE3B-210ENST00000539599 H7C0C1 242 aa14.7□□□□□ -0.06
UBE3B-210ENST00000539599 PRPF4O43172 522 aaKnown RBP eCLIP14.7□□□□□ -0.06
UBE3B-210ENST00000539599 INSRRP14616 1297 aa14.7□□□□□ -0.06
UBE3B-210ENST00000539599 GM2AP17900 193 aa14.7□□□□□ -0.06
UBE3B-210ENST00000539599 ATP5OP48047 213 aa14.7□□□□□ -0.06
UBE3B-210ENST00000539599 MXD4Q14582 209 aaPredicted RBP14.7□□□□□ -0.06
UBE3B-210ENST00000539599 HADHQ16836 314 aaKnown RBP14.7□□□□□ -0.06
UBE3B-210ENST00000539599 SLC10A6Q3KNW5 377 aa14.7□□□□□ -0.06
UBE3B-210ENST00000539599 RNF43Q68DV7 783 aa14.7□□□□□ -0.06
UBE3B-210ENST00000539599 CXorf38Q8TB03 319 aa14.7□□□□□ -0.06
UBE3B-210ENST00000539599 CLEC4CQ8WTT0 213 aa14.7□□□□□ -0.06
UBE3B-210ENST00000539599 TTC17Q96AE7 1141 aa14.7□□□□□ -0.06
UBE3B-210ENST00000539599 TMEM176AQ96HP8 235 aa14.7□□□□□ -0.06
UBE3B-210ENST00000539599 FAM111AQ96PZ2 611 aa14.7□□□□□ -0.06
UBE3B-210ENST00000539599 MECRQ9BV79 373 aa14.7□□□□□ -0.06
UBE3B-210ENST00000539599 KCNG1Q9UIX4 513 aa14.7□□□□□ -0.06
UBE3B-210ENST00000539599 HES2Q9Y543 173 aa14.7□□□□□ -0.06
UBE3B-210ENST00000539599 TCRBV9S1A1TA0A576 114 aa14.7□□□□□ -0.06
UBE3B-210ENST00000539599 CFAP73A6NFT4 308 aa14.7□□□□□ -0.06
UBE3B-210ENST00000539599 CXorf49A8MYA2 514 aaPredicted RBP14.7□□□□□ -0.06
UBE3B-210ENST00000539599 B4GALT4O60513 344 aa14.7□□□□□ -0.06
UBE3B-210ENST00000539599 CILPO75339 1184 aa14.7□□□□□ -0.06
UBE3B-210ENST00000539599 EZRP15311 586 aaKnown RBP14.7□□□□□ -0.06
UBE3B-210ENST00000539599 PDGFRAP16234 1089 aa14.7□□□□□ -0.06
UBE3B-210ENST00000539599 ABCD1P33897 745 aa14.7□□□□□ -0.06
UBE3B-210ENST00000539599 BMPR2Q13873 1038 aa14.7□□□□□ -0.06
UBE3B-210ENST00000539599 PPP6R3Q5H9R7 873 aaPredicted RBP14.7□□□□□ -0.06
UBE3B-210ENST00000539599 SH3D19Q5HYK7 790 aa14.7□□□□□ -0.06
UBE3B-210ENST00000539599 GLRA4Q5JXX5 417 aa14.7□□□□□ -0.06
UBE3B-210ENST00000539599 CDHR3Q6ZTQ4 885 aa14.7□□□□□ -0.06
UBE3B-210ENST00000539599 SCUBE3Q8IX30 993 aa14.7□□□□□ -0.06
UBE3B-210ENST00000539599 GIMAP7Q8NHV1 300 aa14.7□□□□□ -0.06
UBE3B-210ENST00000539599 CCHCR1Q8TD31 782 aa14.7□□□□□ -0.06
UBE3B-210ENST00000539599 PGLYRP2Q96PD5 576 aa14.7□□□□□ -0.06
UBE3B-210ENST00000539599 LRRC37BQ96QE4 947 aa14.7□□□□□ -0.06
UBE3B-210ENST00000539599 BCO2Q9BYV7 579 aa14.7□□□□□ -0.06
UBE3B-210ENST00000539599 ZNF518BQ9C0D4 1074 aa14.7□□□□□ -0.06
UBE3B-210ENST00000539599 MIS12Q9H081 205 aa14.7□□□□□ -0.06
UBE3B-210ENST00000539599 FBXO6Q9NRD1 293 aaPredicted RBP14.7□□□□□ -0.06
UBE3B-210ENST00000539599 SLC17A6Q9P2U8 582 aa14.7□□□□□ -0.06
UBE3B-210ENST00000539599 RBPJLQ9UBG7 517 aa14.7□□□□□ -0.06
UBE3B-210ENST00000539599 TSPAN16Q9UKR8 245 aa14.7□□□□□ -0.06
UBE3B-210ENST00000539599 MFHAS1Q9Y4C4 1052 aa14.7□□□□□ -0.06
UBE3B-210ENST00000539599 NME7Q9Y5B8 376 aa14.7□□□□□ -0.06
UBE3B-210ENST00000539599 PTPRFP10586 1907 aa14.7□□□□□ -0.06
UBE3B-210ENST00000539599 UPP2O95045 317 aa14.69□□□□□ -0.06
UBE3B-210ENST00000539599 HMGCRP04035 888 aa14.69□□□□□ -0.06
UBE3B-210ENST00000539599 F7P08709 466 aaPredicted RBP14.69□□□□□ -0.06
UBE3B-210ENST00000539599 KRT7P08729 469 aa14.69□□□□□ -0.06
UBE3B-210ENST00000539599 TDRPQ86YL5 185 aa14.69□□□□□ -0.06
UBE3B-210ENST00000539599 ZNF276Q8N554 614 aa14.69□□□□□ -0.06
UBE3B-210ENST00000539599 ATP11CQ8NB49 1132 aa14.69□□□□□ -0.06
UBE3B-210ENST00000539599 HPDLQ96IR7 371 aa14.69□□□□□ -0.06
UBE3B-210ENST00000539599 RAB6BQ9NRW1 208 aa14.69□□□□□ -0.06
UBE3B-210ENST00000539599 STRIP2Q9ULQ0 834 aa14.69□□□□□ -0.06
UBE3B-210ENST00000539599 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.69□□□□□ -0.06
UBE3B-210ENST00000539599 BPTFQ12830 3046 aa14.69□□□□□ -0.06
UBE3B-210ENST00000539599 MCF2LO15068 1137 aa14.69□□□□□ -0.06
UBE3B-210ENST00000539599 KCNN4O15554 427 aa14.69□□□□□ -0.06
UBE3B-210ENST00000539599 CYP2C8P10632 490 aa14.69□□□□□ -0.06
UBE3B-210ENST00000539599 PYGBP11216 843 aa14.69□□□□□ -0.06
UBE3B-210ENST00000539599 ARF4P18085 180 aaPredicted RBP14.69□□□□□ -0.06
UBE3B-210ENST00000539599 RBL1P28749 1068 aa14.69□□□□□ -0.06
UBE3B-210ENST00000539599 NR1H3Q13133 447 aa14.69□□□□□ -0.06
UBE3B-210ENST00000539599 CTAGE3PQ8IX95 158 aa14.69□□□□□ -0.06
UBE3B-210ENST00000539599 RIBC1Q8N443 379 aaPredicted RBP14.69□□□□□ -0.06
UBE3B-210ENST00000539599 TTC8Q8TAM2 541 aa14.69□□□□□ -0.06
UBE3B-210ENST00000539599 CCDC110Q8TBZ0 833 aa14.69□□□□□ -0.06
UBE3B-210ENST00000539599 L3MBTL3Q96JM7 780 aaPredicted RBP14.69□□□□□ -0.06
UBE3B-210ENST00000539599 PDZD7Q9H5P4 517 aa14.69□□□□□ -0.06
UBE3B-210ENST00000539599 CXorf56Q9H5V9 222 aa14.69□□□□□ -0.06
UBE3B-210ENST00000539599 ZMYND8Q9ULU4 1186 aaPredicted RBP14.69□□□□□ -0.06
UBE3B-210ENST00000539599 STARD13Q9Y3M8 1113 aa14.69□□□□□ -0.06
UBE3B-210ENST00000539599 CCDC195A0A1B0GUA6 201 aa14.68□□□□□ -0.06
UBE3B-210ENST00000539599 RNF8O76064 485 aa14.68□□□□□ -0.06
UBE3B-210ENST00000539599 BGNP21810 368 aa14.68□□□□□ -0.06
UBE3B-210ENST00000539599 GRIA1P42261 906 aa14.68□□□□□ -0.06
UBE3B-210ENST00000539599 AP3M2P53677 418 aa14.68□□□□□ -0.06
UBE3B-210ENST00000539599 MKRN3Q13064 507 aaKnown RBP14.68□□□□□ -0.06
UBE3B-210ENST00000539599 PTK7Q13308 1070 aa14.68□□□□□ -0.06
UBE3B-210ENST00000539599 PMF1Q6P1K2 205 aa14.68□□□□□ -0.06
UBE3B-210ENST00000539599 ILDR2Q71H61 639 aa14.68□□□□□ -0.06
UBE3B-210ENST00000539599 POLNQ7Z5Q5 900 aa14.68□□□□□ -0.06
UBE3B-210ENST00000539599 TTC7BQ86TV6 843 aa14.68□□□□□ -0.06
UBE3B-210ENST00000539599 ACOT1Q86TX2 421 aa14.68□□□□□ -0.06
UBE3B-210ENST00000539599 FAF2Q96CS3 445 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms