RNA–Protein interactions for RNA: ENST00000539320.2

SCARB1-206, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 720 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-206ENST00000539320 SMARCD1Q96GM5 515 aa23.59■■□□□ 1.37
SCARB1-206ENST00000539320 P2RY13Q9BPV8 354 aa23.59■■□□□ 1.37
SCARB1-206ENST00000539320 DMAP1Q9NPF5 467 aaPredicted RBP23.59■■□□□ 1.37
SCARB1-206ENST00000539320 KRT82Q9NSB4 513 aa23.59■■□□□ 1.37
SCARB1-206ENST00000539320 GMEB2Q9UKD1 530 aa23.59■■□□□ 1.37
SCARB1-206ENST00000539320 RAB23Q9ULC3 237 aa23.59■■□□□ 1.37
SCARB1-206ENST00000539320 LEFTY2O00292 366 aa23.58■■□□□ 1.37
SCARB1-206ENST00000539320 RTN3O95197 1032 aaPredicted RBP23.58■■□□□ 1.37
SCARB1-206ENST00000539320 OLFM2O95897 454 aa23.58■■□□□ 1.37
SCARB1-206ENST00000539320 ABL1P00519 1130 aa23.58■■□□□ 1.37
SCARB1-206ENST00000539320 OAS1P00973 400 aaKnown RBP23.58■■□□□ 1.37
SCARB1-206ENST00000539320 EGFP01133 1207 aa23.58■■□□□ 1.37
SCARB1-206ENST00000539320 TRIM49P0CI25 452 aa23.58■■□□□ 1.37
SCARB1-206ENST00000539320 TRIM49CP0CI26 452 aa23.58■■□□□ 1.37
SCARB1-206ENST00000539320 DRD1P21728 446 aa23.58■■□□□ 1.37
SCARB1-206ENST00000539320 YWHAQP27348 245 aa23.58■■□□□ 1.37
SCARB1-206ENST00000539320 ASPAP45381 313 aa23.58■■□□□ 1.37
SCARB1-206ENST00000539320 SLC7A9P82251 487 aa23.58■■□□□ 1.37
SCARB1-206ENST00000539320 BECN1Q14457 450 aa23.58■■□□□ 1.37
SCARB1-206ENST00000539320 NAIF1Q69YI7 327 aaPredicted RBP23.58■■□□□ 1.37
SCARB1-206ENST00000539320 SPOPLQ6IQ16 392 aa23.58■■□□□ 1.37
SCARB1-206ENST00000539320 PKN3Q6P5Z2 889 aa23.58■■□□□ 1.37
SCARB1-206ENST00000539320 ACOT1Q86TX2 421 aa23.58■■□□□ 1.37
SCARB1-206ENST00000539320 LONP2Q86WA8 852 aa23.58■■□□□ 1.37
SCARB1-206ENST00000539320 FAM186BQ8IYM0 893 aa23.58■■□□□ 1.37
SCARB1-206ENST00000539320 PDZD8Q8NEN9 1154 aa23.58■■□□□ 1.37
SCARB1-206ENST00000539320 FBXO32Q969P5 355 aa23.58■■□□□ 1.37
SCARB1-206ENST00000539320 IMPG2Q9BZV3 1241 aa23.58■■□□□ 1.37
SCARB1-206ENST00000539320 HMGXB4Q9UGU5 601 aa23.58■■□□□ 1.37
SCARB1-206ENST00000539320 CPQQ9Y646 472 aa23.58■■□□□ 1.37
SCARB1-206ENST00000539320 WDR87Q6ZQQ6 2873 aa23.58■■□□□ 1.37
SCARB1-206ENST00000539320 ATG2BQ96BY7 2078 aa23.57■■□□□ 1.36
SCARB1-206ENST00000539320 NFATC1O95644 943 aa23.57■■□□□ 1.36
SCARB1-206ENST00000539320 KRT13P13646 458 aa23.57■■□□□ 1.36
SCARB1-206ENST00000539320 RPL13P26373 211 aaKnown RBP23.57■■□□□ 1.36
SCARB1-206ENST00000539320 NDST1P52848 882 aa23.57■■□□□ 1.36
SCARB1-206ENST00000539320 ENPEPQ07075 957 aa23.57■■□□□ 1.36
SCARB1-206ENST00000539320 HEATR6Q6AI08 1181 aaKnown RBP23.57■■□□□ 1.36
SCARB1-206ENST00000539320 PRR23BQ6ZRT6 265 aa23.57■■□□□ 1.36
SCARB1-206ENST00000539320 PAQR9Q6ZVX9 377 aa23.57■■□□□ 1.36
SCARB1-206ENST00000539320 UNC93AQ86WB7 457 aa23.57■■□□□ 1.36
SCARB1-206ENST00000539320 FUKQ8N0W3 1084 aa23.57■■□□□ 1.36
SCARB1-206ENST00000539320 OVCA2Q8WZ82 227 aa23.57■■□□□ 1.36
SCARB1-206ENST00000539320 SMPD4Q9NXE4 827 aa23.57■■□□□ 1.36
SCARB1-206ENST00000539320 RNF40O75150 1001 aa23.56■■□□□ 1.36
SCARB1-206ENST00000539320 AP1G2O75843 785 aa23.56■■□□□ 1.36
SCARB1-206ENST00000539320 CCDC130P13994 396 aa23.56■■□□□ 1.36
SCARB1-206ENST00000539320 HOXA6P31267 233 aa23.56■■□□□ 1.36
SCARB1-206ENST00000539320 GCLMP48507 274 aa23.56■■□□□ 1.36
SCARB1-206ENST00000539320 SLC5A3P53794 718 aa23.56■■□□□ 1.36
SCARB1-206ENST00000539320 ZXDBP98169 803 aa23.56■■□□□ 1.36
SCARB1-206ENST00000539320 NR1H3Q13133 447 aa23.56■■□□□ 1.36
SCARB1-206ENST00000539320 ORC1Q13415 861 aa23.56■■□□□ 1.36
SCARB1-206ENST00000539320 ZCWPW2Q504Y3 356 aa23.56■■□□□ 1.36
SCARB1-206ENST00000539320 KIAA1958Q8N8K9 716 aa23.56■■□□□ 1.36
SCARB1-206ENST00000539320 CD101Q93033 1021 aa23.56■■□□□ 1.36
SCARB1-206ENST00000539320 KCNK16Q96T55 309 aa23.56■■□□□ 1.36
SCARB1-206ENST00000539320 FBRSL1Q9HCM7 1045 aaKnown RBP23.56■■□□□ 1.36
SCARB1-206ENST00000539320 CACNA1AO00555 2505 aa23.56■■□□□ 1.36
SCARB1-206ENST00000539320 ATG13O75143 517 aa23.55■■□□□ 1.36
SCARB1-206ENST00000539320 MBL2P11226 248 aaPredicted RBP23.55■■□□□ 1.36
SCARB1-206ENST00000539320 CNR2P34972 360 aa23.55■■□□□ 1.36
SCARB1-206ENST00000539320 PSMC2P35998 433 aaKnown RBP23.55■■□□□ 1.36
SCARB1-206ENST00000539320 GALK1P51570 392 aa23.55■■□□□ 1.36
SCARB1-206ENST00000539320 PPP3CAQ08209 521 aa23.55■■□□□ 1.36
SCARB1-206ENST00000539320 SIM2Q14190 667 aaPredicted RBP23.55■■□□□ 1.36
SCARB1-206ENST00000539320 LPAL2Q16609 132 aa23.55■■□□□ 1.36
SCARB1-206ENST00000539320 FBXO43Q4G163 708 aa23.55■■□□□ 1.36
SCARB1-206ENST00000539320 LAIR1Q6GTX8 287 aa23.55■■□□□ 1.36
SCARB1-206ENST00000539320 GPR161Q8N6U8 529 aaKnown RBP23.55■■□□□ 1.36
SCARB1-206ENST00000539320 TAS1R2Q8TE23 839 aa23.55■■□□□ 1.36
SCARB1-206ENST00000539320 RMDN1Q96DB5 314 aa23.55■■□□□ 1.36
SCARB1-206ENST00000539320 RNF38Q9H0F5 515 aa23.55■■□□□ 1.36
SCARB1-206ENST00000539320 LINC00597Q9H2U6 94 aa23.55■■□□□ 1.36
SCARB1-206ENST00000539320 UTP3Q9NQZ2 479 aaKnown RBP eCLIP23.55■■□□□ 1.364e-6■■■■■ 59.3
SCARB1-206ENST00000539320 TNFRSF10BO14763 440 aa23.54■■□□□ 1.36
SCARB1-206ENST00000539320 TRIM21P19474 475 aaKnown RBP23.54■■□□□ 1.36
SCARB1-206ENST00000539320 INCA1Q0VD86 236 aa23.54■■□□□ 1.36
SCARB1-206ENST00000539320 SRSF5Q13243 272 aaKnown RBP23.54■■□□□ 1.36
SCARB1-206ENST00000539320 ADAM9Q13443 819 aa23.54■■□□□ 1.36
SCARB1-206ENST00000539320 EDRF1Q3B7T1 1238 aa23.54■■□□□ 1.36
SCARB1-206ENST00000539320 WDR5BQ86VZ2 330 aa23.54■■□□□ 1.36
SCARB1-206ENST00000539320 DDX42Q86XP3 938 aaKnown RBP eCLIP23.54■■□□□ 1.36
SCARB1-206ENST00000539320 SMYD4Q8IYR2 804 aaPredicted RBP23.54■■□□□ 1.36
SCARB1-206ENST00000539320 CRYBG2Q8N1P7 616 aa23.54■■□□□ 1.36
SCARB1-206ENST00000539320 SCAMP5Q8TAC9 235 aa23.54■■□□□ 1.36
SCARB1-206ENST00000539320 SLC2A14Q8TDB8 520 aa23.54■■□□□ 1.36
SCARB1-206ENST00000539320 NIF3L1Q9GZT8 377 aa23.54■■□□□ 1.36
SCARB1-206ENST00000539320 MMRN2Q9H8L6 949 aa23.54■■□□□ 1.36
SCARB1-206ENST00000539320 APOBEC3GQ9HC16 384 aaKnown RBP23.54■■□□□ 1.36
SCARB1-206ENST00000539320 FAM49BQ9NUQ9 324 aa23.54■■□□□ 1.36
SCARB1-206ENST00000539320 DCHS1Q96JQ0 3298 aa23.54■■□□□ 1.36
SCARB1-206ENST00000539320 SLC9A3R1O14745 358 aaPredicted RBP23.53■■□□□ 1.36
SCARB1-206ENST00000539320 HRO43593 1189 aa23.53■■□□□ 1.36
SCARB1-206ENST00000539320 HOXC13P31276 330 aa23.53■■□□□ 1.36
SCARB1-206ENST00000539320 PNOCQ13519 176 aa23.53■■□□□ 1.36
SCARB1-206ENST00000539320 FILIP1Q7Z7B0 1213 aa23.53■■□□□ 1.36
SCARB1-206ENST00000539320 FMR1NBQ8N0W7 255 aaPredicted RBP23.53■■□□□ 1.36
SCARB1-206ENST00000539320 ZMIZ2Q8NF64 920 aa23.53■■□□□ 1.36
SCARB1-206ENST00000539320 SMOQ99835 787 aa23.53■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms