RNA–Protein interactions for RNA: ENST00000539047.1

VAMP1-207, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 565 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-207ENST00000539047 MTMR11A4FU01 709 aa16.2■□□□□ 0.18
VAMP1-207ENST00000539047 LINC01553A4QN01 128 aa16.2■□□□□ 0.18
VAMP1-207ENST00000539047 MIF4GDA9UHW6 222 aaKnown RBP16.2■□□□□ 0.18
VAMP1-207ENST00000539047 TULP2O00295 520 aa16.2■□□□□ 0.18
VAMP1-207ENST00000539047 PIK3R2O00459 728 aa16.2■□□□□ 0.18
VAMP1-207ENST00000539047 RB1P06400 928 aa16.2■□□□□ 0.18
VAMP1-207ENST00000539047 DNAJB2P25686 324 aa16.2■□□□□ 0.18
VAMP1-207ENST00000539047 MAN1A1P33908 653 aa16.2■□□□□ 0.18
VAMP1-207ENST00000539047 OR1D2P34982 312 aa16.2■□□□□ 0.18
VAMP1-207ENST00000539047 NDUFV1P49821 464 aa16.2■□□□□ 0.18
VAMP1-207ENST00000539047 TKTL1P51854 596 aa16.2■□□□□ 0.18
VAMP1-207ENST00000539047 ROR1Q01973 937 aa16.2■□□□□ 0.18
VAMP1-207ENST00000539047 PIGHQ14442 188 aaPredicted RBP16.2■□□□□ 0.18
VAMP1-207ENST00000539047 SMC1AQ14683 1233 aaKnown RBP16.2■□□□□ 0.18
VAMP1-207ENST00000539047 RAB30Q15771 203 aa16.2■□□□□ 0.18
VAMP1-207ENST00000539047 MGAT5BQ3V5L5 792 aa16.2■□□□□ 0.18
VAMP1-207ENST00000539047 TMC7Q7Z402 723 aa16.2■□□□□ 0.18
VAMP1-207ENST00000539047 UBL4BQ8N7F7 174 aa16.2■□□□□ 0.18
VAMP1-207ENST00000539047 PGLYRP2Q96PD5 576 aa16.2■□□□□ 0.18
VAMP1-207ENST00000539047 SEPT5Q99719 369 aaPredicted RBP16.2■□□□□ 0.18
VAMP1-207ENST00000539047 SMOQ99835 787 aa16.2■□□□□ 0.18
VAMP1-207ENST00000539047 NCAPGQ9BPX3 1015 aa16.2■□□□□ 0.18
VAMP1-207ENST00000539047 VN1R3Q9BXE9 311 aa16.2■□□□□ 0.18
VAMP1-207ENST00000539047 EMILIN2Q9BXX0 1053 aa16.2■□□□□ 0.18
VAMP1-207ENST00000539047 ZBP1Q9H171 429 aa16.2■□□□□ 0.18
VAMP1-207ENST00000539047 RRAGDQ9NQL2 400 aaPredicted RBP16.2■□□□□ 0.18
VAMP1-207ENST00000539047 EHD2Q9NZN4 543 aa16.2■□□□□ 0.18
VAMP1-207ENST00000539047 MSRAQ9UJ68 235 aa16.2■□□□□ 0.18
VAMP1-207ENST00000539047 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.2■□□□□ 0.18
VAMP1-207ENST00000539047 LCHNA4D1U4 455 aa16.19■□□□□ 0.18
VAMP1-207ENST00000539047 F8VP50 259 aa16.19■□□□□ 0.18
VAMP1-207ENST00000539047 TBC1D4O60343 1298 aa16.19■□□□□ 0.18
VAMP1-207ENST00000539047 HSF2BPO75031 334 aa16.19■□□□□ 0.18
VAMP1-207ENST00000539047 RNF8O76064 485 aa16.19■□□□□ 0.18
VAMP1-207ENST00000539047 URI1O94763 535 aaPredicted RBP16.19■□□□□ 0.18
VAMP1-207ENST00000539047 FTCDO95954 541 aa16.19■□□□□ 0.18
VAMP1-207ENST00000539047 CTSAP10619 480 aa16.19■□□□□ 0.18
VAMP1-207ENST00000539047 GPD1P21695 349 aa16.19■□□□□ 0.18
VAMP1-207ENST00000539047 CYP2F1P24903 491 aa16.19■□□□□ 0.18
VAMP1-207ENST00000539047 PSMA2P25787 234 aa16.19■□□□□ 0.18
VAMP1-207ENST00000539047 ELF1P32519 619 aa16.19■□□□□ 0.18
VAMP1-207ENST00000539047 SSR1P43307 286 aaKnown RBP16.19■□□□□ 0.18
VAMP1-207ENST00000539047 RPL34P49207 117 aaKnown RBP16.19■□□□□ 0.18
VAMP1-207ENST00000539047 TUFMP49411 452 aaKnown RBP16.19■□□□□ 0.18
VAMP1-207ENST00000539047 RABGGTBP53611 331 aa16.19■□□□□ 0.18
VAMP1-207ENST00000539047 RPS6KA1Q15418 735 aa16.19■□□□□ 0.18
VAMP1-207ENST00000539047 OLFML1Q6UWY5 402 aa16.19■□□□□ 0.18
VAMP1-207ENST00000539047 SLC26A9Q7LBE3 791 aa16.19■□□□□ 0.18
VAMP1-207ENST00000539047 LRRC57Q8N9N7 239 aa16.19■□□□□ 0.18
VAMP1-207ENST00000539047 FNIP1Q8TF40 1166 aa16.19■□□□□ 0.18
VAMP1-207ENST00000539047 IRGQQ8WZA9 623 aa16.19■□□□□ 0.18
VAMP1-207ENST00000539047 FAM149B1Q96BN6 582 aa16.19■□□□□ 0.18
VAMP1-207ENST00000539047 C8orf48Q96LL4 319 aa16.19■□□□□ 0.18
VAMP1-207ENST00000539047 CEP295NLQ96MC4 621 aa16.19■□□□□ 0.18
VAMP1-207ENST00000539047 TGS1Q96RS0 853 aaKnown RBP16.19■□□□□ 0.18
VAMP1-207ENST00000539047 RHOBTB2Q9BYZ6 727 aa16.19■□□□□ 0.18
VAMP1-207ENST00000539047 FBXO44Q9H4M3 255 aa16.19■□□□□ 0.18
VAMP1-207ENST00000539047 ASNSD1Q9NWL6 643 aa16.19■□□□□ 0.18
VAMP1-207ENST00000539047 FNIP2Q9P278 1114 aa16.19■□□□□ 0.18
VAMP1-207ENST00000539047 TJP2Q9UDY2 1190 aa16.19■□□□□ 0.18
VAMP1-207ENST00000539047 AFF4Q9UHB7 1163 aaKnown RBP16.19■□□□□ 0.18
VAMP1-207ENST00000539047 CHORDC1Q9UHD1 332 aaPredicted RBP16.19■□□□□ 0.18
VAMP1-207ENST00000539047 MAFFQ9ULX9 164 aa16.19■□□□□ 0.18
VAMP1-207ENST00000539047 HYOU1Q9Y4L1 999 aa16.19■□□□□ 0.18
VAMP1-207ENST00000539047 LAMA3Q16787 3333 aa16.19■□□□□ 0.18
VAMP1-207ENST00000539047 PLXNA3P51805 1871 aa16.18■□□□□ 0.18
VAMP1-207ENST00000539047 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.18■□□□□ 0.18
VAMP1-207ENST00000539047 TMEM191CA6NGB0 347 aa16.18■□□□□ 0.18
VAMP1-207ENST00000539047 PAPSS1O43252 624 aaPredicted RBP16.18■□□□□ 0.18
VAMP1-207ENST00000539047 BEST1O76090 585 aa16.18■□□□□ 0.18
VAMP1-207ENST00000539047 PROSCO94903 275 aa16.18■□□□□ 0.18
VAMP1-207ENST00000539047 RTN3O95197 1032 aaPredicted RBP16.18■□□□□ 0.18
VAMP1-207ENST00000539047 ZBED1O96006 694 aa16.18■□□□□ 0.18
VAMP1-207ENST00000539047 ADH1AP07327 375 aa16.18■□□□□ 0.18
VAMP1-207ENST00000539047 GLI1P08151 1106 aa16.18■□□□□ 0.18
VAMP1-207ENST00000539047 TCP1P17987 556 aaKnown RBP16.18■□□□□ 0.18
VAMP1-207ENST00000539047 SDC4P31431 198 aa16.18■□□□□ 0.18
VAMP1-207ENST00000539047 RNASE9P60153 205 aaKnown RBP16.18■□□□□ 0.18
VAMP1-207ENST00000539047 ACAP1Q15027 740 aa16.18■□□□□ 0.18
VAMP1-207ENST00000539047 PPP1R15BQ5SWA1 713 aa16.18■□□□□ 0.18
VAMP1-207ENST00000539047 MEI1Q5TIA1 1274 aa16.18■□□□□ 0.18
VAMP1-207ENST00000539047 LLGL2Q6P1M3 1020 aa16.18■□□□□ 0.18
VAMP1-207ENST00000539047 RNF19BQ6ZMZ0 732 aa16.18■□□□□ 0.18
VAMP1-207ENST00000539047 SLFN11Q7Z7L1 901 aa16.18■□□□□ 0.18
VAMP1-207ENST00000539047 SCUBE3Q8IX30 993 aa16.18■□□□□ 0.18
VAMP1-207ENST00000539047 KCNK16Q96T55 309 aa16.18■□□□□ 0.18
VAMP1-207ENST00000539047 HSFX1Q9UBD0 423 aa16.18■□□□□ 0.18
VAMP1-207ENST00000539047 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.17■□□□□ 0.18
VAMP1-207ENST00000539047 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.17■□□□□ 0.18
VAMP1-207ENST00000539047 TCRBV5S1A1TA0A578 114 aa16.17■□□□□ 0.18
VAMP1-207ENST00000539047 WDR27A2RRH5 827 aa16.17■□□□□ 0.18
VAMP1-207ENST00000539047 C5orf67F2Z3F1 127 aa16.17■□□□□ 0.18
VAMP1-207ENST00000539047 ENC1O14682 589 aa16.17■□□□□ 0.18
VAMP1-207ENST00000539047 CAPN9O14815 690 aa16.17■□□□□ 0.18
VAMP1-207ENST00000539047 DAB1O75553 588 aa16.17■□□□□ 0.18
VAMP1-207ENST00000539047 CA3P07451 260 aa16.17■□□□□ 0.18
VAMP1-207ENST00000539047 RPL17P18621 184 aaKnown RBP16.17■□□□□ 0.18
VAMP1-207ENST00000539047 CDR1P51861 262 aa16.17■□□□□ 0.18
VAMP1-207ENST00000539047 MRPS5P82675 430 aaKnown RBP16.17■□□□□ 0.18
VAMP1-207ENST00000539047 ADCY1Q08828 1119 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms