RNA–Protein interactions for RNA: ENST00000538995.1

RTN3-209, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 814 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-209ENST00000538995 TICRRQ7Z2Z1 1910 aa12.27□□□□□ -0.45
RTN3-209ENST00000538995 OBSL1O75147 1896 aa12.26□□□□□ -0.45
RTN3-209ENST00000538995 FAM92AA1XBS5 289 aa12.26□□□□□ -0.45
RTN3-209ENST00000538995 TNFRSF10BO14763 440 aa12.26□□□□□ -0.45
RTN3-209ENST00000538995 CILPO75339 1184 aa12.26□□□□□ -0.45
RTN3-209ENST00000538995 AP1G2O75843 785 aa12.26□□□□□ -0.45
RTN3-209ENST00000538995 OAS1P00973 400 aaKnown RBP12.26□□□□□ -0.45
RTN3-209ENST00000538995 YWHAQP27348 245 aa12.26□□□□□ -0.45
RTN3-209ENST00000538995 SOX9P48436 509 aa12.26□□□□□ -0.45
RTN3-209ENST00000538995 TUBP50607 506 aa12.26□□□□□ -0.45
RTN3-209ENST00000538995 SLC5A3P53794 718 aa12.26□□□□□ -0.45
RTN3-209ENST00000538995 PMS1P54277 932 aaKnown RBP12.26□□□□□ -0.45
RTN3-209ENST00000538995 TAF10Q12962 218 aa12.26□□□□□ -0.45
RTN3-209ENST00000538995 MTAPQ13126 283 aa12.26□□□□□ -0.45
RTN3-209ENST00000538995 SNX30Q5VWJ9 437 aa12.26□□□□□ -0.45
RTN3-209ENST00000538995 ANKRD40Q6AI12 368 aa12.26□□□□□ -0.45
RTN3-209ENST00000538995 TXNDC11Q6PKC3 985 aa12.26□□□□□ -0.45
RTN3-209ENST00000538995 DDX42Q86XP3 938 aaKnown RBP eCLIP12.26□□□□□ -0.45
RTN3-209ENST00000538995 SYNPOQ8N3V7 929 aa12.26□□□□□ -0.45
RTN3-209ENST00000538995 CPA6Q8N4T0 437 aa12.26□□□□□ -0.45
RTN3-209ENST00000538995 ARL14EPQ8N8R7 260 aaPredicted RBP12.26□□□□□ -0.45
RTN3-209ENST00000538995 RIN3Q8TB24 985 aa12.26□□□□□ -0.45
RTN3-209ENST00000538995 SLC2A14Q8TDB8 520 aa12.26□□□□□ -0.45
RTN3-209ENST00000538995 SH3RF2Q8TEC5 729 aa12.26□□□□□ -0.45
RTN3-209ENST00000538995 ERCC4Q92889 916 aaPredicted RBP12.26□□□□□ -0.45
RTN3-209ENST00000538995 ATP2A3Q93084 1043 aa12.26□□□□□ -0.45
RTN3-209ENST00000538995 FBXO32Q969P5 355 aa12.26□□□□□ -0.45
RTN3-209ENST00000538995 EXOC4Q96A65 974 aa12.26□□□□□ -0.45
RTN3-209ENST00000538995 ELMO3Q96BJ8 720 aa12.26□□□□□ -0.45
RTN3-209ENST00000538995 EEF2KMTQ96G04 330 aa12.26□□□□□ -0.45
RTN3-209ENST00000538995 CEP63Q96MT8 703 aa12.26□□□□□ -0.45
RTN3-209ENST00000538995 SLC22A12Q96S37 553 aa12.26□□□□□ -0.45
RTN3-209ENST00000538995 HNRNPABQ99729 332 aaKnown RBP12.26□□□□□ -0.45
RTN3-209ENST00000538995 MMRN2Q9H8L6 949 aa12.26□□□□□ -0.45
RTN3-209ENST00000538995 LMAN1LQ9HAT1 526 aa12.26□□□□□ -0.45
RTN3-209ENST00000538995 METTL14Q9HCE5 456 aaKnown RBP12.26□□□□□ -0.45
RTN3-209ENST00000538995 PNPLA8Q9NP80 782 aa12.26□□□□□ -0.45
RTN3-209ENST00000538995 RAB20Q9NX57 234 aa12.26□□□□□ -0.45
RTN3-209ENST00000538995 CHMP5Q9NZZ3 219 aa12.26□□□□□ -0.45
RTN3-209ENST00000538995 ARMCX3Q9UH62 379 aaPredicted RBP12.26□□□□□ -0.45
RTN3-209ENST00000538995 COQ4Q9Y3A0 265 aa12.26□□□□□ -0.45
RTN3-209ENST00000538995 PCDHGA2Q9Y5H1 932 aa12.26□□□□□ -0.45
RTN3-209ENST00000538995 GVINP1Q7Z2Y8 2422 aa12.26□□□□□ -0.45
RTN3-209ENST00000538995 DENND4CQ5VZ89 1909 aa12.25□□□□□ -0.45
RTN3-209ENST00000538995 BICDL2A1A5D9 508 aa12.25□□□□□ -0.45
RTN3-209ENST00000538995 PAPSS2O95340 614 aaPredicted RBP12.25□□□□□ -0.45
RTN3-209ENST00000538995 FAM200BP0CF97 657 aa12.25□□□□□ -0.45
RTN3-209ENST00000538995 CCDC130P13994 396 aa12.25□□□□□ -0.45
RTN3-209ENST00000538995 IFNAR2P48551 515 aa12.25□□□□□ -0.45
RTN3-209ENST00000538995 CCR3P51677 355 aa12.25□□□□□ -0.45
RTN3-209ENST00000538995 UBE2HP62256 183 aa12.25□□□□□ -0.45
RTN3-209ENST00000538995 CCINQ13939 588 aa12.25□□□□□ -0.45
RTN3-209ENST00000538995 MORC3Q14149 939 aa12.25□□□□□ -0.45
RTN3-209ENST00000538995 DCAF17Q5H9S7 520 aaPredicted RBP12.25□□□□□ -0.45
RTN3-209ENST00000538995 WDR44Q5JSH3 913 aa12.25□□□□□ -0.45
RTN3-209ENST00000538995 TCERG1LQ5VWI1 586 aa12.25□□□□□ -0.45
RTN3-209ENST00000538995 ASCL5Q7RTU5 278 aa12.25□□□□□ -0.45
RTN3-209ENST00000538995 SPEM1Q8N4L4 309 aa12.25□□□□□ -0.45
RTN3-209ENST00000538995 NELL1Q92832 810 aa12.25□□□□□ -0.45
RTN3-209ENST00000538995 SLC35C1Q96A29 364 aa12.25□□□□□ -0.45
RTN3-209ENST00000538995 CYP2S1Q96SQ9 504 aa12.25□□□□□ -0.45
RTN3-209ENST00000538995 KCNK16Q96T55 309 aa12.25□□□□□ -0.45
RTN3-209ENST00000538995 SMOQ99835 787 aa12.25□□□□□ -0.45
RTN3-209ENST00000538995 FBXO44Q9H4M3 255 aa12.25□□□□□ -0.45
RTN3-209ENST00000538995 EBF3Q9H4W6 596 aa12.25□□□□□ -0.45
RTN3-209ENST00000538995 FAM49BQ9NUQ9 324 aa12.25□□□□□ -0.45
RTN3-209ENST00000538995 ZSCAN32Q9NX65 697 aa12.25□□□□□ -0.45
RTN3-209ENST00000538995 DUS2Q9NX74 493 aaKnown RBP12.25□□□□□ -0.45
RTN3-209ENST00000538995 PATJQ8NI35 1801 aa12.25□□□□□ -0.45
RTN3-209ENST00000538995 CACNA1IQ9P0X4 2223 aa12.25□□□□□ -0.45
RTN3-209ENST00000538995 TRIM49BA6NDI0 452 aa12.24□□□□□ -0.45
RTN3-209ENST00000538995 FAM186AA6NE01 2351 aa12.24□□□□□ -0.45
RTN3-209ENST00000538995 TRDMT1O14717 391 aaKnown RBP12.24□□□□□ -0.45
RTN3-209ENST00000538995 PMM2O15305 246 aa12.24□□□□□ -0.45
RTN3-209ENST00000538995 GADD45BO75293 160 aaPredicted RBP12.24□□□□□ -0.45
RTN3-209ENST00000538995 NFATC1O95644 943 aa12.24□□□□□ -0.45
RTN3-209ENST00000538995 ZDHHC11BP0C7U3 371 aa12.24□□□□□ -0.45
RTN3-209ENST00000538995 ARSAP15289 507 aa12.24□□□□□ -0.45
RTN3-209ENST00000538995 CD58P19256 250 aa12.24□□□□□ -0.45
RTN3-209ENST00000538995 NRLP54845 237 aa12.24□□□□□ -0.45
RTN3-209ENST00000538995 CSTF1Q05048 431 aaKnown RBP12.24□□□□□ -0.45
RTN3-209ENST00000538995 GRSF1Q12849 480 aaKnown RBP eCLIP12.24□□□□□ -0.45
RTN3-209ENST00000538995 ORC1Q13415 861 aa12.24□□□□□ -0.45
RTN3-209ENST00000538995 PON2Q15165 354 aa12.24□□□□□ -0.45
RTN3-209ENST00000538995 EML3Q32P44 896 aa12.24□□□□□ -0.45
RTN3-209ENST00000538995 CBWD6Q4V339 395 aa12.24□□□□□ -0.45
RTN3-209ENST00000538995 TMEM196Q5HYL7 178 aa12.24□□□□□ -0.45
RTN3-209ENST00000538995 CBWD3Q5JTY5 395 aa12.24□□□□□ -0.45
RTN3-209ENST00000538995 CBWD5Q5RIA9 395 aa12.24□□□□□ -0.45
RTN3-209ENST00000538995 TRIM68Q6AZZ1 485 aa12.24□□□□□ -0.45
RTN3-209ENST00000538995 TTI2Q6NXR4 508 aa12.24□□□□□ -0.45
RTN3-209ENST00000538995 FILIP1Q7Z7B0 1213 aa12.24□□□□□ -0.45
RTN3-209ENST00000538995 C12orf29Q8N999 325 aa12.24□□□□□ -0.45
RTN3-209ENST00000538995 TRIML1Q8N9V2 468 aa12.24□□□□□ -0.45
RTN3-209ENST00000538995 ZBTB44Q8NCP5 570 aa12.24□□□□□ -0.45
RTN3-209ENST00000538995 ZMIZ2Q8NF64 920 aa12.24□□□□□ -0.45
RTN3-209ENST00000538995 TTC8Q8TAM2 541 aa12.24□□□□□ -0.45
RTN3-209ENST00000538995 WHAMMQ8TF30 809 aa12.24□□□□□ -0.45
RTN3-209ENST00000538995 SEMA4DQ92854 862 aa12.24□□□□□ -0.45
RTN3-209ENST00000538995 TWNKQ96RR1 684 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms