RNA–Protein interactions for RNA: ENST00000538570.5

COL4A6-208, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-208ENST00000538570 ANKRD27Q96NW4 1050 aa10.29□□□□□ -0.76
COL4A6-208ENST00000538570 FAM111AQ96PZ2 611 aa10.29□□□□□ -0.76
COL4A6-208ENST00000538570 FRMD8P1Q9BZ68 369 aaPredicted RBP10.29□□□□□ -0.76
COL4A6-208ENST00000538570 TSPOAP1O95153 1857 aa10.29□□□□□ -0.76
COL4A6-208ENST00000538570 STMND1H3BQB6 276 aa10.29□□□□□ -0.76
COL4A6-208ENST00000538570 ITGA4P13612 1032 aa10.29□□□□□ -0.76
COL4A6-208ENST00000538570 HARS2P49590 506 aaKnown RBP10.29□□□□□ -0.76
COL4A6-208ENST00000538570 LRRC8DQ7L1W4 858 aa10.29□□□□□ -0.76
COL4A6-208ENST00000538570 ANKS1AQ92625 1134 aa10.29□□□□□ -0.76
COL4A6-208ENST00000538570 CCDC126Q96EE4 140 aa10.29□□□□□ -0.76
COL4A6-208ENST00000538570 MAGEB18Q96M61 343 aa10.29□□□□□ -0.76
COL4A6-208ENST00000538570 DCLRE1BQ9H816 532 aa10.29□□□□□ -0.76
COL4A6-208ENST00000538570 RNF112Q9ULX5 631 aa10.29□□□□□ -0.76
COL4A6-208ENST00000538570 KCNH4Q9UQ05 1017 aa10.29□□□□□ -0.76
COL4A6-208ENST00000538570 IQGAP3Q86VI3 1631 aa10.29□□□□□ -0.76
COL4A6-208ENST00000538570 TK2O00142 265 aa10.29□□□□□ -0.76
COL4A6-208ENST00000538570 PRRG1O14668 218 aa10.29□□□□□ -0.76
COL4A6-208ENST00000538570 KLK7P49862 253 aa10.29□□□□□ -0.76
COL4A6-208ENST00000538570 STK4Q13043 487 aa10.29□□□□□ -0.76
COL4A6-208ENST00000538570 MTMR2Q13614 643 aa10.29□□□□□ -0.76
COL4A6-208ENST00000538570 TSC22D1Q15714 1073 aa10.29□□□□□ -0.76
COL4A6-208ENST00000538570 ARMCX4Q5H9R4 360 aa10.29□□□□□ -0.76
COL4A6-208ENST00000538570 KLHDC7AQ5VTJ3 777 aa10.29□□□□□ -0.76
COL4A6-208ENST00000538570 UNC45BQ8IWX7 931 aa10.29□□□□□ -0.76
COL4A6-208ENST00000538570 SEPT1Q8WYJ6 367 aa10.29□□□□□ -0.76
COL4A6-208ENST00000538570 MKNK1Q9BUB5 465 aa10.29□□□□□ -0.76
COL4A6-208ENST00000538570 CINPQ9BW66 212 aaPredicted RBP10.29□□□□□ -0.76
COL4A6-208ENST00000538570 DDX18Q9NVP1 670 aaKnown RBP10.29□□□□□ -0.76
COL4A6-208ENST00000538570 HEY2Q9UBP5 337 aa10.29□□□□□ -0.76
COL4A6-208ENST00000538570 CTNNAL1Q9UBT7 734 aa10.29□□□□□ -0.76
COL4A6-208ENST00000538570 HAO1Q9UJM8 370 aa10.29□□□□□ -0.76
COL4A6-208ENST00000538570 LINC00854A0A1B0GVQ3 168 aa10.29□□□□□ -0.76
COL4A6-208ENST00000538570 TPST1O60507 370 aa10.29□□□□□ -0.76
COL4A6-208ENST00000538570 GYPCP04921 128 aa10.29□□□□□ -0.76
COL4A6-208ENST00000538570 SERPINB5P36952 375 aa10.29□□□□□ -0.76
COL4A6-208ENST00000538570 HMGCS2P54868 508 aa10.29□□□□□ -0.76
COL4A6-208ENST00000538570 IER5Q5VY09 327 aa10.29□□□□□ -0.76
COL4A6-208ENST00000538570 KCNB2Q92953 911 aa10.29□□□□□ -0.76
COL4A6-208ENST00000538570 NIF3L1Q9GZT8 377 aa10.29□□□□□ -0.76
COL4A6-208ENST00000538570 EFCAB1Q9HAE3 211 aa10.29□□□□□ -0.76
COL4A6-208ENST00000538570 MTMR4Q9NYA4 1195 aa10.29□□□□□ -0.76
COL4A6-208ENST00000538570 ZNF180Q9UJW8 692 aa10.29□□□□□ -0.76
COL4A6-208ENST00000538570 LAMC1P11047 1609 aa10.29□□□□□ -0.76
COL4A6-208ENST00000538570 KANSL1LA0AUZ9 987 aa10.29□□□□□ -0.76
COL4A6-208ENST00000538570 PSTPIP1O43586 416 aa10.29□□□□□ -0.76
COL4A6-208ENST00000538570 GH1P01241 217 aa10.29□□□□□ -0.76
COL4A6-208ENST00000538570 H2AFXP16104 143 aaPredicted RBP10.29□□□□□ -0.76
COL4A6-208ENST00000538570 CHRNB3Q05901 458 aa10.29□□□□□ -0.76
COL4A6-208ENST00000538570 OASLQ15646 514 aaKnown RBP10.29□□□□□ -0.76
COL4A6-208ENST00000538570 MGAT5BQ3V5L5 792 aa10.29□□□□□ -0.76
COL4A6-208ENST00000538570 ZC2HC1CQ53FD0 456 aaPredicted RBP10.29□□□□□ -0.76
COL4A6-208ENST00000538570 OTOAQ7RTW8 1153 aa10.29□□□□□ -0.76
COL4A6-208ENST00000538570 DEPDC7Q96QD5 511 aa10.29□□□□□ -0.76
COL4A6-208ENST00000538570 PAIP1Q9H074 479 aaKnown RBP10.29□□□□□ -0.76
COL4A6-208ENST00000538570 EPS8L2Q9H6S3 715 aa10.29□□□□□ -0.76
COL4A6-208ENST00000538570 PDZK1P1A8MUH7 402 aa10.28□□□□□ -0.76
COL4A6-208ENST00000538570 TGM2P21980 687 aa10.28□□□□□ -0.76
COL4A6-208ENST00000538570 CHI3L1P36222 383 aaPredicted RBP10.28□□□□□ -0.76
COL4A6-208ENST00000538570 COG2Q14746 738 aa10.28□□□□□ -0.76
COL4A6-208ENST00000538570 CYP51A1Q16850 503 aa10.28□□□□□ -0.76
COL4A6-208ENST00000538570 CLEC16AQ2KHT3 1053 aa10.28□□□□□ -0.76
COL4A6-208ENST00000538570 CYP4A22Q5TCH4 519 aa10.28□□□□□ -0.76
COL4A6-208ENST00000538570 STOX1Q6ZVD7 989 aa10.28□□□□□ -0.76
COL4A6-208ENST00000538570 SEPT12Q8IYM1 358 aa10.28□□□□□ -0.76
COL4A6-208ENST00000538570 PGBD3Q8N328 593 aa10.28□□□□□ -0.76
COL4A6-208ENST00000538570 C10orf53Q8N6V4 93 aa10.28□□□□□ -0.76
COL4A6-208ENST00000538570 ZNF333Q96JL9 665 aa10.28□□□□□ -0.76
COL4A6-208ENST00000538570 FAM84BQ96KN1 310 aaPredicted RBP10.28□□□□□ -0.76
COL4A6-208ENST00000538570 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.28□□□□□ -0.76
COL4A6-208ENST00000538570 TUBE1Q9UJT0 475 aa10.28□□□□□ -0.76
COL4A6-208ENST00000538570 ADGRA3Q8IWK6 1321 aa10.28□□□□□ -0.76
COL4A6-208ENST00000538570 NCAM1P13591 858 aa10.28□□□□□ -0.76
COL4A6-208ENST00000538570 TFE3P19532 575 aaPredicted RBP10.28□□□□□ -0.76
COL4A6-208ENST00000538570 AVPR1AP37288 418 aa10.28□□□□□ -0.76
COL4A6-208ENST00000538570 GEMP55040 296 aa10.28□□□□□ -0.76
COL4A6-208ENST00000538570 OVGP1Q12889 678 aa10.28□□□□□ -0.76
COL4A6-208ENST00000538570 MTM1Q13496 603 aa10.28□□□□□ -0.76
COL4A6-208ENST00000538570 THOC7Q6I9Y2 204 aaKnown RBP10.28□□□□□ -0.76
COL4A6-208ENST00000538570 ACAD10Q6JQN1 1059 aa10.28□□□□□ -0.76
COL4A6-208ENST00000538570 DENND1BQ6P3S1 775 aa10.28□□□□□ -0.76
COL4A6-208ENST00000538570 IZUMO2Q6UXV1 221 aa10.28□□□□□ -0.76
COL4A6-208ENST00000538570 ZNF554Q86TJ5 538 aa10.28□□□□□ -0.76
COL4A6-208ENST00000538570 SH2D3AQ9BRG2 576 aa10.28□□□□□ -0.76
COL4A6-208ENST00000538570 C15orf41Q9Y2V0 281 aa10.28□□□□□ -0.76
COL4A6-208ENST00000538570 FAM205CA6NFA0 338 aa10.28□□□□□ -0.76
COL4A6-208ENST00000538570 MSL3P1P0C860 447 aa10.28□□□□□ -0.76
COL4A6-208ENST00000538570 ADRA2BP18089 450 aa10.28□□□□□ -0.76
COL4A6-208ENST00000538570 MAPK1P28482 360 aa10.28□□□□□ -0.76
COL4A6-208ENST00000538570 TUFMP49411 452 aaKnown RBP10.28□□□□□ -0.76
COL4A6-208ENST00000538570 FOXO4P98177 505 aa10.28□□□□□ -0.76
COL4A6-208ENST00000538570 OTUD4Q01804 1114 aaKnown RBP10.28□□□□□ -0.76
COL4A6-208ENST00000538570 PRKCEQ02156 737 aa10.28□□□□□ -0.76
COL4A6-208ENST00000538570 TUBA3EQ6PEY2 450 aa10.28□□□□□ -0.76
COL4A6-208ENST00000538570 LPCAT2Q7L5N7 544 aa10.28□□□□□ -0.76
COL4A6-208ENST00000538570 CHSY1Q86X52 802 aa10.28□□□□□ -0.76
COL4A6-208ENST00000538570 DENND6AQ8IWF6 608 aa10.28□□□□□ -0.76
COL4A6-208ENST00000538570 SCUBE1Q8IWY4 988 aa10.28□□□□□ -0.76
COL4A6-208ENST00000538570 NOA1Q8NC60 698 aaKnown RBP10.28□□□□□ -0.76
COL4A6-208ENST00000538570 RUVBL2Q9Y230 463 aaKnown RBP10.28□□□□□ -0.76
COL4A6-208ENST00000538570 STIP1P31948 543 aaKnown RBP10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms