RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 MAP10Q9P2G4 905 aa5.56□□□□□ -1.52
LRP6-203ENST00000538239 SNX12Q9UMY4 172 aa5.56□□□□□ -1.52
LRP6-203ENST00000538239 AFDNP55196 1824 aaKnown RBP5.56□□□□□ -1.52
LRP6-203ENST00000538239 ACKR2O00590 384 aa5.56□□□□□ -1.52
LRP6-203ENST00000538239 PYGLP06737 847 aa5.56□□□□□ -1.52
LRP6-203ENST00000538239 SPATA31D3P0C874 917 aa5.56□□□□□ -1.52
LRP6-203ENST00000538239 RBP3P10745 1247 aa5.56□□□□□ -1.52
LRP6-203ENST00000538239 DDX5P17844 614 aaKnown RBP5.56□□□□□ -1.52
LRP6-203ENST00000538239 VCLP18206 1134 aa5.56□□□□□ -1.52
LRP6-203ENST00000538239 ZNF200P98182 395 aaPredicted RBP5.56□□□□□ -1.52
LRP6-203ENST00000538239 PRKCQQ04759 706 aa5.56□□□□□ -1.52
LRP6-203ENST00000538239 SPATA31D4Q6ZUB0 917 aa5.56□□□□□ -1.52
LRP6-203ENST00000538239 SPATA4Q8NEY3 305 aa5.56□□□□□ -1.52
LRP6-203ENST00000538239 TMC2Q8TDI7 906 aa5.56□□□□□ -1.52
LRP6-203ENST00000538239 SLC20A1Q8WUM9 679 aa5.56□□□□□ -1.52
LRP6-203ENST00000538239 USP13Q92995 863 aaPredicted RBP5.56□□□□□ -1.52
LRP6-203ENST00000538239 HIPK3Q9H422 1215 aa5.56□□□□□ -1.52
LRP6-203ENST00000538239 CYP3A43Q9HB55 503 aa5.56□□□□□ -1.52
LRP6-203ENST00000538239 SPG21Q9NZD8 308 aa5.56□□□□□ -1.52
LRP6-203ENST00000538239 USP18Q9UMW8 372 aa5.56□□□□□ -1.52
LRP6-203ENST00000538239 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.56□□□□□ -1.52
LRP6-203ENST00000538239 A8MX80 341 aa5.56□□□□□ -1.52
LRP6-203ENST00000538239 DCTN3O75935 186 aa5.56□□□□□ -1.52
LRP6-203ENST00000538239 RTN3O95197 1032 aaPredicted RBP5.56□□□□□ -1.52
LRP6-203ENST00000538239 ARIH2O95376 493 aa5.56□□□□□ -1.52
LRP6-203ENST00000538239 HOXC6P09630 235 aa5.56□□□□□ -1.52
LRP6-203ENST00000538239 SCNN1BP51168 640 aa5.56□□□□□ -1.52
LRP6-203ENST00000538239 SGCGQ13326 291 aa5.56□□□□□ -1.52
LRP6-203ENST00000538239 PTK6Q13882 451 aa5.56□□□□□ -1.52
LRP6-203ENST00000538239 PDE1CQ14123 709 aaPredicted RBP5.56□□□□□ -1.52
LRP6-203ENST00000538239 TAF11Q15544 211 aa5.56□□□□□ -1.52
LRP6-203ENST00000538239 NTRK3Q16288 839 aa5.56□□□□□ -1.52
LRP6-203ENST00000538239 TMEM259Q4ZIN3 620 aa5.56□□□□□ -1.52
LRP6-203ENST00000538239 KIAA0319LQ8IZA0 1049 aa5.56□□□□□ -1.52
LRP6-203ENST00000538239 SLC2A14Q8TDB8 520 aa5.56□□□□□ -1.52
LRP6-203ENST00000538239 RXFP2Q8WXD0 754 aa5.56□□□□□ -1.52
LRP6-203ENST00000538239 C9orf72Q96LT7 481 aa5.56□□□□□ -1.52
LRP6-203ENST00000538239 WDR24Q96S15 920 aa5.56□□□□□ -1.52
LRP6-203ENST00000538239 GAS2L1Q99501 681 aaPredicted RBP5.56□□□□□ -1.52
LRP6-203ENST00000538239 MRIQ9BWK5 157 aa5.56□□□□□ -1.52
LRP6-203ENST00000538239 CELF4Q9BZC1 486 aaKnown RBP5.56□□□□□ -1.52
LRP6-203ENST00000538239 SELENONQ9NZV5 590 aa5.56□□□□□ -1.52
LRP6-203ENST00000538239 ROBO1Q9Y6N7 1651 aa5.56□□□□□ -1.52
LRP6-203ENST00000538239 NT5C1B-RDH14C9J2C7 533 aa5.56□□□□□ -1.52
LRP6-203ENST00000538239 ANKRD63C9JTQ0 380 aa5.56□□□□□ -1.52
LRP6-203ENST00000538239 ADCY6O43306 1168 aa5.56□□□□□ -1.52
LRP6-203ENST00000538239 CYTH3O43739 400 aa5.56□□□□□ -1.52
LRP6-203ENST00000538239 AKAP3O75969 853 aa5.56□□□□□ -1.52
LRP6-203ENST00000538239 F9P00740 461 aa5.56□□□□□ -1.52
LRP6-203ENST00000538239 MYL2P10916 166 aa5.56□□□□□ -1.52
LRP6-203ENST00000538239 LRRC74AQ0VAA2 488 aa5.56□□□□□ -1.52
LRP6-203ENST00000538239 SNCBQ16143 134 aa5.56□□□□□ -1.52
LRP6-203ENST00000538239 NOMO2Q5JPE7 1267 aa5.56□□□□□ -1.52
LRP6-203ENST00000538239 PRR23CQ6ZRP0 262 aa5.56□□□□□ -1.52
LRP6-203ENST00000538239 LINC00523Q86TU6 105 aa5.56□□□□□ -1.52
LRP6-203ENST00000538239 CAMKK2Q96RR4 588 aa5.56□□□□□ -1.52
LRP6-203ENST00000538239 WDR18Q9BV38 432 aa5.56□□□□□ -1.52
LRP6-203ENST00000538239 UBP1Q9NZI7 540 aa5.56□□□□□ -1.52
LRP6-203ENST00000538239 TRMT6Q9UJA5 497 aaKnown RBP5.56□□□□□ -1.52
LRP6-203ENST00000538239 SIGLEC1Q9BZZ2 1709 aa5.56□□□□□ -1.52
LRP6-203ENST00000538239 MTSS1O43312 755 aa5.56□□□□□ -1.52
LRP6-203ENST00000538239 OR1E1P30953 314 aa5.56□□□□□ -1.52
LRP6-203ENST00000538239 CCR1P32246 355 aa5.56□□□□□ -1.52
LRP6-203ENST00000538239 ITGA8P53708 1063 aa5.56□□□□□ -1.52
LRP6-203ENST00000538239 ALDH18A1P54886 795 aaKnown RBP5.56□□□□□ -1.52
LRP6-203ENST00000538239 SLC12A3P55017 1021 aa5.56□□□□□ -1.52
LRP6-203ENST00000538239 PTK7Q13308 1070 aa5.56□□□□□ -1.52
LRP6-203ENST00000538239 BOLA3Q53S33 107 aa5.56□□□□□ -1.52
LRP6-203ENST00000538239 C3orf62Q6ZUJ4 267 aa5.56□□□□□ -1.52
LRP6-203ENST00000538239 DNAAF5Q86Y56 855 aa5.56□□□□□ -1.52
LRP6-203ENST00000538239 ARHGEF19Q8IW93 802 aa5.56□□□□□ -1.52
LRP6-203ENST00000538239 RGL4Q8IZJ4 473 aa5.56□□□□□ -1.52
LRP6-203ENST00000538239 PIP4K2CQ8TBX8 421 aa5.56□□□□□ -1.52
LRP6-203ENST00000538239 APOL2Q9BQE5 337 aa5.56□□□□□ -1.52
LRP6-203ENST00000538239 TRABDQ9H4I3 376 aa5.56□□□□□ -1.52
LRP6-203ENST00000538239 WWOXQ9NZC7 414 aa5.56□□□□□ -1.52
LRP6-203ENST00000538239 FBXO10Q9UK96 956 aa5.56□□□□□ -1.52
LRP6-203ENST00000538239 ST3GAL5Q9UNP4 418 aa5.56□□□□□ -1.52
LRP6-203ENST00000538239 USH1CQ9Y6N9 552 aa5.56□□□□□ -1.52
LRP6-203ENST00000538239 UMODL1Q5DID0 1318 aa5.56□□□□□ -1.52
LRP6-203ENST00000538239 LRRIQ3A6PVS8 624 aaPredicted RBP5.56□□□□□ -1.52
LRP6-203ENST00000538239 C5orf58C9J3I9 102 aa5.56□□□□□ -1.52
LRP6-203ENST00000538239 SOX11P35716 441 aa5.56□□□□□ -1.52
LRP6-203ENST00000538239 AARSP49588 968 aaKnown RBP eCLIP5.56□□□□□ -1.52
LRP6-203ENST00000538239 CTCFP49711 727 aaPredicted RBP5.56□□□□□ -1.52
LRP6-203ENST00000538239 RAP1GDS1P52306 607 aa5.56□□□□□ -1.52
LRP6-203ENST00000538239 TCEA2Q15560 299 aa5.56□□□□□ -1.52
LRP6-203ENST00000538239 UGP2Q16851 508 aa5.56□□□□□ -1.52
LRP6-203ENST00000538239 LRRC8EQ6NSJ5 796 aa5.56□□□□□ -1.52
LRP6-203ENST00000538239 NT5DC3Q86UY8 548 aa5.56□□□□□ -1.52
LRP6-203ENST00000538239 LPCAT1Q8NF37 534 aa5.56□□□□□ -1.52
LRP6-203ENST00000538239 SENP8Q96LD8 212 aa5.56□□□□□ -1.52
LRP6-203ENST00000538239 TEX12Q9BXU0 123 aa5.56□□□□□ -1.52
LRP6-203ENST00000538239 DMAP1Q9NPF5 467 aaPredicted RBP5.56□□□□□ -1.52
LRP6-203ENST00000538239 NCKAP1Q9Y2A7 1128 aa5.56□□□□□ -1.52
LRP6-203ENST00000538239 ADGRB2O60241 1585 aa5.56□□□□□ -1.52
LRP6-203ENST00000538239 PARP4Q9UKK3 1724 aaKnown RBP5.56□□□□□ -1.52
LRP6-203ENST00000538239 TISP43B9A030 160 aa5.55□□□□□ -1.52
LRP6-203ENST00000538239 NDUFS2O75306 463 aa5.55□□□□□ -1.52
LRP6-203ENST00000538239 H2AFYO75367 372 aaKnown RBP5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms