RNA–Protein interactions for RNA: ENST00000538177.5

SLC28A1-204, Transcript of solute carrier family 28 member 1, humanhuman

TSL 2 BASIC

Gene SLC28A1, Length 2,155 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-204ENST00000538177 CTCFP49711 727 aaPredicted RBP11.95□□□□□ -0.5
SLC28A1-204ENST00000538177 CDH6P55285 790 aa11.95□□□□□ -0.5
SLC28A1-204ENST00000538177 SNX16P57768 344 aa11.95□□□□□ -0.5
SLC28A1-204ENST00000538177 SLC6A3Q01959 620 aa11.95□□□□□ -0.5
SLC28A1-204ENST00000538177 MPP2Q14168 576 aa11.95□□□□□ -0.5
SLC28A1-204ENST00000538177 TFDP2Q14188 446 aa11.95□□□□□ -0.5
SLC28A1-204ENST00000538177 DPYSL3Q14195 570 aa11.95□□□□□ -0.5
SLC28A1-204ENST00000538177 RASA2Q15283 850 aa11.95□□□□□ -0.5
SLC28A1-204ENST00000538177 SOWAHAQ2M3V2 549 aa11.95□□□□□ -0.5
SLC28A1-204ENST00000538177 RAB6CQ53S08 254 aa11.95□□□□□ -0.5
SLC28A1-204ENST00000538177 BOLA3Q53S33 107 aa11.95□□□□□ -0.5
SLC28A1-204ENST00000538177 XKR4Q5GH76 650 aa11.95□□□□□ -0.5
SLC28A1-204ENST00000538177 FAM47CQ5HY64 1035 aa11.95□□□□□ -0.5
SLC28A1-204ENST00000538177 OLFML2BQ68BL8 750 aa11.95□□□□□ -0.5
SLC28A1-204ENST00000538177 TLK2Q86UE8 772 aa11.95□□□□□ -0.5
SLC28A1-204ENST00000538177 ZDHHC17Q8IUH5 632 aa11.95□□□□□ -0.5
SLC28A1-204ENST00000538177 TEKT4Q8WW24 435 aa11.95□□□□□ -0.5
SLC28A1-204ENST00000538177 CABS1Q96KC9 395 aa11.95□□□□□ -0.5
SLC28A1-204ENST00000538177 TSPAN18Q96SJ8 248 aa11.95□□□□□ -0.5
SLC28A1-204ENST00000538177 MAK16Q9BXY0 300 aaKnown RBP11.95□□□□□ -0.5
SLC28A1-204ENST00000538177 RAB6CQ9H0N0 254 aa11.95□□□□□ -0.5
SLC28A1-204ENST00000538177 PPCSQ9HAB8 311 aa11.95□□□□□ -0.5
SLC28A1-204ENST00000538177 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.95□□□□□ -0.5
SLC28A1-204ENST00000538177 HESX1Q9UBX0 185 aa11.95□□□□□ -0.5
SLC28A1-204ENST00000538177 CPA4Q9UI42 421 aa11.95□□□□□ -0.5
SLC28A1-204ENST00000538177 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.95□□□□□ -0.5
SLC28A1-204ENST00000538177 EXOC1LA0A1B0GW35 172 aa11.94□□□□□ -0.5
SLC28A1-204ENST00000538177 PIRO00625 290 aa11.94□□□□□ -0.5
SLC28A1-204ENST00000538177 MCF2LO15068 1137 aa11.94□□□□□ -0.5
SLC28A1-204ENST00000538177 CD4P01730 458 aa11.94□□□□□ -0.5
SLC28A1-204ENST00000538177 RBP3P10745 1247 aa11.94□□□□□ -0.5
SLC28A1-204ENST00000538177 BRAFP15056 766 aa11.94□□□□□ -0.5
SLC28A1-204ENST00000538177 STIP1P31948 543 aaKnown RBP11.94□□□□□ -0.5
SLC28A1-204ENST00000538177 RDXP35241 583 aaKnown RBP11.94□□□□□ -0.5
SLC28A1-204ENST00000538177 PSEN2P49810 448 aa11.94□□□□□ -0.5
SLC28A1-204ENST00000538177 LIG3P49916 1009 aa11.94□□□□□ -0.5
SLC28A1-204ENST00000538177 PDIA2Q13087 525 aaKnown RBP11.94□□□□□ -0.5
SLC28A1-204ENST00000538177 NR1H3Q13133 447 aa11.94□□□□□ -0.5
SLC28A1-204ENST00000538177 MMRN1Q13201 1228 aa11.94□□□□□ -0.5
SLC28A1-204ENST00000538177 SNX17Q15036 470 aa11.94□□□□□ -0.5
SLC28A1-204ENST00000538177 PDK2Q15119 407 aa11.94□□□□□ -0.5
SLC28A1-204ENST00000538177 NOMO1Q15155 1222 aa11.94□□□□□ -0.5
SLC28A1-204ENST00000538177 HIF1AQ16665 826 aa11.94□□□□□ -0.5
SLC28A1-204ENST00000538177 SESTD1Q86VW0 696 aa11.94□□□□□ -0.5
SLC28A1-204ENST00000538177 VSIG1Q86XK7 387 aa11.94□□□□□ -0.5
SLC28A1-204ENST00000538177 MAP7D3Q8IWC1 876 aa11.94□□□□□ -0.5
SLC28A1-204ENST00000538177 CRYBG2Q8N1P7 616 aa11.94□□□□□ -0.5
SLC28A1-204ENST00000538177 DNAJB3Q8WWF6 145 aa11.94□□□□□ -0.5
SLC28A1-204ENST00000538177 RNF157Q96PX1 679 aa11.94□□□□□ -0.5
SLC28A1-204ENST00000538177 NCAPGQ9BPX3 1015 aa11.94□□□□□ -0.5
SLC28A1-204ENST00000538177 TRIM6Q9C030 488 aaPredicted RBP11.94□□□□□ -0.5
SLC28A1-204ENST00000538177 FAM49BQ9NUQ9 324 aa11.94□□□□□ -0.5
SLC28A1-204ENST00000538177 FLRT1Q9NZU1 646 aa11.94□□□□□ -0.5
SLC28A1-204ENST00000538177 GJD2Q9UKL4 321 aa11.94□□□□□ -0.5
SLC28A1-204ENST00000538177 ZMYND8Q9ULU4 1186 aaPredicted RBP11.94□□□□□ -0.5
SLC28A1-204ENST00000538177 SMIM28A0A1B0GU29 152 aa11.94□□□□□ -0.5
SLC28A1-204ENST00000538177 FOXO6A8MYZ6 492 aa11.94□□□□□ -0.5
SLC28A1-204ENST00000538177 E7ESA3 106 aa11.94□□□□□ -0.5
SLC28A1-204ENST00000538177 PAPSS1O43252 624 aaPredicted RBP11.94□□□□□ -0.5
SLC28A1-204ENST00000538177 GRAP2O75791 330 aa11.94□□□□□ -0.5
SLC28A1-204ENST00000538177 FSBPO95073 299 aa11.94□□□□□ -0.5
SLC28A1-204ENST00000538177 KCNE1P15382 129 aa11.94□□□□□ -0.5
SLC28A1-204ENST00000538177 IFNAR2P48551 515 aa11.94□□□□□ -0.5
SLC28A1-204ENST00000538177 ARL4CP56559 192 aa11.94□□□□□ -0.5
SLC28A1-204ENST00000538177 PDE4CQ08493 712 aa11.94□□□□□ -0.5
SLC28A1-204ENST00000538177 GLRA4Q5JXX5 417 aa11.94□□□□□ -0.5
SLC28A1-204ENST00000538177 ANKRD22Q5VYY1 191 aa11.94□□□□□ -0.5
SLC28A1-204ENST00000538177 LIMS2Q7Z4I7 341 aa11.94□□□□□ -0.5
SLC28A1-204ENST00000538177 CCDC13Q8IYE1 715 aa11.94□□□□□ -0.5
SLC28A1-204ENST00000538177 ZBED8Q8IZ13 594 aa11.94□□□□□ -0.5
SLC28A1-204ENST00000538177 FAM71DQ8N9W8 422 aa11.94□□□□□ -0.5
SLC28A1-204ENST00000538177 OR6B3Q8NGW1 331 aa11.94□□□□□ -0.5
SLC28A1-204ENST00000538177 SPATA18Q8TC71 538 aa11.94□□□□□ -0.5
SLC28A1-204ENST00000538177 PPP1R13LQ8WUF5 828 aa11.94□□□□□ -0.5
SLC28A1-204ENST00000538177 TMEM40Q8WWA1 233 aa11.94□□□□□ -0.5
SLC28A1-204ENST00000538177 P3H4Q92791 437 aa11.94□□□□□ -0.5
SLC28A1-204ENST00000538177 TBCBQ99426 244 aa11.94□□□□□ -0.5
SLC28A1-204ENST00000538177 KCNK9Q9NPC2 374 aa11.94□□□□□ -0.5
SLC28A1-204ENST00000538177 GDAP2Q9NXN4 497 aa11.94□□□□□ -0.5
SLC28A1-204ENST00000538177 TBK1Q9UHD2 729 aa11.94□□□□□ -0.5
SLC28A1-204ENST00000538177 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.93□□□□□ -0.5
SLC28A1-204ENST00000538177 IL4RP24394 825 aa11.93□□□□□ -0.5
SLC28A1-204ENST00000538177 AKAP5P24588 427 aa11.93□□□□□ -0.5
SLC28A1-204ENST00000538177 SDC4P31431 198 aa11.93□□□□□ -0.5
SLC28A1-204ENST00000538177 SCNN1AP37088 669 aa11.93□□□□□ -0.5
SLC28A1-204ENST00000538177 RPL34P49207 117 aaKnown RBP11.93□□□□□ -0.5
SLC28A1-204ENST00000538177 FBXO47Q5MNV8 452 aa11.93□□□□□ -0.5
SLC28A1-204ENST00000538177 UBXN11Q5T124 520 aa11.93□□□□□ -0.5
SLC28A1-204ENST00000538177 RNF187Q5TA31 235 aaPredicted RBP11.93□□□□□ -0.5
SLC28A1-204ENST00000538177 CCDC121Q6ZUS5 278 aa11.93□□□□□ -0.5
SLC28A1-204ENST00000538177 TRABD2AQ86V40 505 aa11.93□□□□□ -0.5
SLC28A1-204ENST00000538177 SCUBE3Q8IX30 993 aa11.93□□□□□ -0.5
SLC28A1-204ENST00000538177 SRRM1Q8IYB3 904 aaKnown RBP11.93□□□□□ -0.5
SLC28A1-204ENST00000538177 ANKRD52Q8NB46 1076 aa11.93□□□□□ -0.5
SLC28A1-204ENST00000538177 CCDC197Q8NCU1 140 aa11.93□□□□□ -0.5
SLC28A1-204ENST00000538177 KBTBD7Q8WVZ9 684 aa11.93□□□□□ -0.5
SLC28A1-204ENST00000538177 CKAP2Q8WWK9 683 aa11.93□□□□□ -0.5
SLC28A1-204ENST00000538177 UBN1Q9NPG3 1134 aa11.93□□□□□ -0.5
SLC28A1-204ENST00000538177 SLC24A2Q9UI40 661 aa11.93□□□□□ -0.5
SLC28A1-204ENST00000538177 PIN4Q9Y237 131 aaKnown RBP11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms