RNA–Protein interactions for RNA: ENST00000537641.5

CPSF7-218, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-218ENST00000537641 IKBKGQ9Y6K9 419 aa12.7□□□□□ -0.38
CPSF7-218ENST00000537641 ZNF541Q9H0D2 1346 aa12.7□□□□□ -0.38
CPSF7-218ENST00000537641 CNTNAP2Q9UHC6 1331 aa12.7□□□□□ -0.38
CPSF7-218ENST00000537641 EIF4E1BA6NMX2 242 aaKnown RBP12.69□□□□□ -0.38
CPSF7-218ENST00000537641 STAM2O75886 525 aa12.69□□□□□ -0.38
CPSF7-218ENST00000537641 INHBAP08476 426 aa12.69□□□□□ -0.38
CPSF7-218ENST00000537641 EIF4BP23588 611 aaKnown RBP12.69□□□□□ -0.38
CPSF7-218ENST00000537641 PGM1P36871 562 aa12.69□□□□□ -0.38
CPSF7-218ENST00000537641 SERPINB4P48594 390 aa12.69□□□□□ -0.38
CPSF7-218ENST00000537641 ACOT2P49753 483 aa12.69□□□□□ -0.38
CPSF7-218ENST00000537641 GDF10P55107 478 aa12.69□□□□□ -0.38
CPSF7-218ENST00000537641 ZNF200P98182 395 aaPredicted RBP12.69□□□□□ -0.38
CPSF7-218ENST00000537641 GAD2Q05329 585 aa12.69□□□□□ -0.38
CPSF7-218ENST00000537641 GRM1Q13255 1194 aa12.69□□□□□ -0.38
CPSF7-218ENST00000537641 NCOA4Q13772 614 aa12.69□□□□□ -0.38
CPSF7-218ENST00000537641 TRMT5Q32P41 509 aaKnown RBP12.69□□□□□ -0.38
CPSF7-218ENST00000537641 THEMIS2Q5TEJ8 643 aa12.69□□□□□ -0.38
CPSF7-218ENST00000537641 C6orf163Q5TEZ5 329 aa12.69□□□□□ -0.38
CPSF7-218ENST00000537641 SH2D5Q6ZV89 423 aa12.69□□□□□ -0.38
CPSF7-218ENST00000537641 TRMT1LQ7Z2T5 733 aaKnown RBP12.69□□□□□ -0.38
CPSF7-218ENST00000537641 RAB3IL1Q8TBN0 382 aa12.69□□□□□ -0.38
CPSF7-218ENST00000537641 UCMAQ8WVF2 138 aa12.69□□□□□ -0.38
CPSF7-218ENST00000537641 GATA6Q92908 595 aa12.69□□□□□ -0.38
CPSF7-218ENST00000537641 TTC17Q96AE7 1141 aa12.69□□□□□ -0.38
CPSF7-218ENST00000537641 CDHR1Q96JP9 859 aa12.69□□□□□ -0.38
CPSF7-218ENST00000537641 ZNF184Q99676 751 aaPredicted RBP12.69□□□□□ -0.38
CPSF7-218ENST00000537641 ARHGEF4Q9NR80 690 aa12.69□□□□□ -0.38
CPSF7-218ENST00000537641 DDX43Q9NXZ2 648 aaKnown RBP12.69□□□□□ -0.38
CPSF7-218ENST00000537641 WDR35Q9P2L0 1181 aa12.69□□□□□ -0.38
CPSF7-218ENST00000537641 ZNF214Q9UL59 606 aaPredicted RBP12.69□□□□□ -0.38
CPSF7-218ENST00000537641 PPME1Q9Y570 386 aa12.69□□□□□ -0.38
CPSF7-218ENST00000537641 SSC5DA1L4H1 1573 aa12.68□□□□□ -0.38
CPSF7-218ENST00000537641 DICER1Q9UPY3 1922 aaKnown RBP12.68□□□□□ -0.38
CPSF7-218ENST00000537641 KLHL33A6NCF5 533 aa12.68□□□□□ -0.38
CPSF7-218ENST00000537641 I3L4J1 428 aa12.68□□□□□ -0.38
CPSF7-218ENST00000537641 GOLGA8RI6L899 631 aa12.68□□□□□ -0.38
CPSF7-218ENST00000537641 APOC4-APOC2K7ER74 178 aa12.68□□□□□ -0.38
CPSF7-218ENST00000537641 CST8O60676 142 aa12.68□□□□□ -0.38
CPSF7-218ENST00000537641 CIB2O75838 187 aa12.68□□□□□ -0.38
CPSF7-218ENST00000537641 ASS1P00966 412 aaKnown RBP12.68□□□□□ -0.38
CPSF7-218ENST00000537641 APOC2P02655 101 aa12.68□□□□□ -0.38
CPSF7-218ENST00000537641 MYL2P10916 166 aa12.68□□□□□ -0.38
CPSF7-218ENST00000537641 KCNA2P16389 499 aa12.68□□□□□ -0.38
CPSF7-218ENST00000537641 BGNP21810 368 aa12.68□□□□□ -0.38
CPSF7-218ENST00000537641 KDELR1P24390 212 aa12.68□□□□□ -0.38
CPSF7-218ENST00000537641 POLR2BP30876 1174 aaKnown RBP12.68□□□□□ -0.38
CPSF7-218ENST00000537641 NAMPTP43490 491 aa12.68□□□□□ -0.38
CPSF7-218ENST00000537641 RAB27AP51159 221 aa12.68□□□□□ -0.38
CPSF7-218ENST00000537641 HMGCS2P54868 508 aa12.68□□□□□ -0.38
CPSF7-218ENST00000537641 PRKCEQ02156 737 aa12.68□□□□□ -0.38
CPSF7-218ENST00000537641 DNAL1Q4LDG9 190 aa12.68□□□□□ -0.38
CPSF7-218ENST00000537641 ANGEL2Q5VTE6 544 aaKnown RBP12.68□□□□□ -0.38
CPSF7-218ENST00000537641 TTC39BQ5VTQ0 682 aaPredicted RBP12.68□□□□□ -0.38
CPSF7-218ENST00000537641 ATG16L1Q676U5 607 aa12.68□□□□□ -0.38
CPSF7-218ENST00000537641 SMC1BQ8NDV3 1235 aa12.68□□□□□ -0.38
CPSF7-218ENST00000537641 FAM111AQ96PZ2 611 aa12.68□□□□□ -0.38
CPSF7-218ENST00000537641 KLF6Q99612 283 aaPredicted RBP12.68□□□□□ -0.38
CPSF7-218ENST00000537641 TEX13BQ9BXU2 312 aa12.68□□□□□ -0.38
CPSF7-218ENST00000537641 ADAM33Q9BZ11 813 aa12.68□□□□□ -0.38
CPSF7-218ENST00000537641 FRMD8Q9BZ67 464 aaPredicted RBP12.68□□□□□ -0.38
CPSF7-218ENST00000537641 GPAMQ9HCL2 828 aa12.68□□□□□ -0.38
CPSF7-218ENST00000537641 FBXO6Q9NRD1 293 aaPredicted RBP12.68□□□□□ -0.38
CPSF7-218ENST00000537641 ZNF180Q9UJW8 692 aa12.68□□□□□ -0.38
CPSF7-218ENST00000537641 CHMP2BQ9UQN3 213 aa12.68□□□□□ -0.38
CPSF7-218ENST00000537641 C2CD2Q9Y426 696 aa12.68□□□□□ -0.38
CPSF7-218ENST00000537641 PTPRFP10586 1907 aa12.68□□□□□ -0.38
CPSF7-218ENST00000537641 A0A0B4J269 797 aa12.68□□□□□ -0.38
CPSF7-218ENST00000537641 COPEO14579 308 aa12.68□□□□□ -0.38
CPSF7-218ENST00000537641 MCF2LO15068 1137 aa12.68□□□□□ -0.38
CPSF7-218ENST00000537641 PSMA2P25787 234 aa12.68□□□□□ -0.38
CPSF7-218ENST00000537641 CCNFP41002 786 aa12.68□□□□□ -0.38
CPSF7-218ENST00000537641 CACNA2D1P54289 1103 aa12.68□□□□□ -0.38
CPSF7-218ENST00000537641 FAAP100Q0VG06 881 aa12.68□□□□□ -0.38
CPSF7-218ENST00000537641 THOC5Q13769 683 aaKnown RBP12.68□□□□□ -0.38
CPSF7-218ENST00000537641 EMC2Q15006 297 aa12.68□□□□□ -0.38
CPSF7-218ENST00000537641 XKR3Q5GH77 459 aa12.68□□□□□ -0.38
CPSF7-218ENST00000537641 MTHFD1LQ6UB35 978 aa12.68□□□□□ -0.38
CPSF7-218ENST00000537641 CATSPERGQ6ZRH7 1159 aa12.68□□□□□ -0.38
CPSF7-218ENST00000537641 WDR49Q8IV35 697 aa12.68□□□□□ -0.38
CPSF7-218ENST00000537641 BRSK2Q8IWQ3 736 aa12.68□□□□□ -0.38
CPSF7-218ENST00000537641 ARHGAP18Q8N392 663 aa12.68□□□□□ -0.38
CPSF7-218ENST00000537641 WDR60Q8WVS4 1066 aa12.68□□□□□ -0.38
CPSF7-218ENST00000537641 ACSF2Q96CM8 615 aaPredicted RBP12.68□□□□□ -0.38
CPSF7-218ENST00000537641 PRR11Q96HE9 360 aaPredicted RBP12.68□□□□□ -0.38
CPSF7-218ENST00000537641 SERAC1Q96JX3 654 aa12.68□□□□□ -0.38
CPSF7-218ENST00000537641 MSTO1Q9BUK6 570 aa12.68□□□□□ -0.38
CPSF7-218ENST00000537641 HAPLN2Q9GZV7 340 aa12.68□□□□□ -0.38
CPSF7-218ENST00000537641 IQCGQ9H095 443 aaKnown RBP12.68□□□□□ -0.38
CPSF7-218ENST00000537641 WWP1Q9H0M0 922 aa12.68□□□□□ -0.38
CPSF7-218ENST00000537641 ACAD9Q9H845 621 aa12.68□□□□□ -0.38
CPSF7-218ENST00000537641 KRT82Q9NSB4 513 aa12.68□□□□□ -0.38
CPSF7-218ENST00000537641 ETAA1Q9NY74 926 aa12.68□□□□□ -0.38
CPSF7-218ENST00000537641 PPP1R1BQ9UD71 204 aaPredicted RBP12.68□□□□□ -0.38
CPSF7-218ENST00000537641 PPP2R3BQ9Y5P8 575 aa12.68□□□□□ -0.38
CPSF7-218ENST00000537641 TEX264Q9Y6I9 313 aa12.68□□□□□ -0.38
CPSF7-218ENST00000537641 ADGRA2Q96PE1 1338 aa12.67□□□□□ -0.38
CPSF7-218ENST00000537641 TCRBV7S3A2A0A539 114 aa12.67□□□□□ -0.38
CPSF7-218ENST00000537641 CAPN14A8MX76 684 aa12.67□□□□□ -0.38
CPSF7-218ENST00000537641 SPECC1L-ADORA2AF8WAN1 911 aa12.67□□□□□ -0.38
CPSF7-218ENST00000537641 CHADO15335 359 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms