RNA–Protein interactions for RNA: ENST00000537529.6

MKS1-204, Transcript of Meckel syndrome, type 1, humanhuman

TSL 1 (best) BASIC

Gene MKS1, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-204ENST00000537529 TMEM40Q8WWA1 233 aa16.39■□□□□ 0.21
MKS1-204ENST00000537529 PIWIL1Q96J94 861 aaKnown RBP16.39■□□□□ 0.21
MKS1-204ENST00000537529 APBA2Q99767 749 aa16.39■□□□□ 0.21
MKS1-204ENST00000537529 PHACTR1Q9C0D0 580 aa16.39■□□□□ 0.21
MKS1-204ENST00000537529 CCDC134Q9H6E4 229 aa16.39■□□□□ 0.21
MKS1-204ENST00000537529 SMIM28A0A1B0GU29 152 aa16.39■□□□□ 0.21
MKS1-204ENST00000537529 PIRO00625 290 aa16.39■□□□□ 0.21
MKS1-204ENST00000537529 GRAP2O75791 330 aa16.39■□□□□ 0.21
MKS1-204ENST00000537529 SDC4P31431 198 aa16.39■□□□□ 0.21
MKS1-204ENST00000537529 PSMC4P43686 418 aa16.39■□□□□ 0.21
MKS1-204ENST00000537529 PDK2Q15119 407 aa16.39■□□□□ 0.21
MKS1-204ENST00000537529 CDO1Q16878 200 aa16.39■□□□□ 0.21
MKS1-204ENST00000537529 CCDC14Q49A88 953 aa16.39■□□□□ 0.21
MKS1-204ENST00000537529 SH3PXD2AQ5TCZ1 1133 aa16.39■□□□□ 0.21
MKS1-204ENST00000537529 CST9Q5W186 159 aa16.39■□□□□ 0.21
MKS1-204ENST00000537529 CYP4V2Q6ZWL3 525 aaPredicted RBP16.39■□□□□ 0.21
MKS1-204ENST00000537529 CPLX4Q7Z7G2 160 aa16.39■□□□□ 0.21
MKS1-204ENST00000537529 NME8Q8N427 588 aa16.39■□□□□ 0.21
MKS1-204ENST00000537529 TEKT4Q8WW24 435 aa16.39■□□□□ 0.21
MKS1-204ENST00000537529 SOCS4Q8WXH5 440 aa16.39■□□□□ 0.21
MKS1-204ENST00000537529 SNX25Q9H3E2 840 aa16.39■□□□□ 0.21
MKS1-204ENST00000537529 GDAP2Q9NXN4 497 aa16.39■□□□□ 0.21
MKS1-204ENST00000537529 CTNNAL1Q9UBT7 734 aa16.39■□□□□ 0.21
MKS1-204ENST00000537529 FARP1Q9Y4F1 1045 aaPredicted RBP16.39■□□□□ 0.21
MKS1-204ENST00000537529 NME7Q9Y5B8 376 aa16.39■□□□□ 0.21
MKS1-204ENST00000537529 SMAPO00193 183 aa16.38■□□□□ 0.21
MKS1-204ENST00000537529 CYP2B6P20813 491 aa16.38■□□□□ 0.21
MKS1-204ENST00000537529 DRD4P21917 467 aa16.38■□□□□ 0.21
MKS1-204ENST00000537529 CTCFP49711 727 aaPredicted RBP16.38■□□□□ 0.21
MKS1-204ENST00000537529 BCAT1P54687 386 aa16.38■□□□□ 0.21
MKS1-204ENST00000537529 IRX5P78411 483 aaPredicted RBP16.38■□□□□ 0.21
MKS1-204ENST00000537529 BEX3Q00994 111 aa16.38■□□□□ 0.21
MKS1-204ENST00000537529 PDE4CQ08493 712 aa16.38■□□□□ 0.21
MKS1-204ENST00000537529 BST2Q10589 180 aaKnown RBP16.38■□□□□ 0.21
MKS1-204ENST00000537529 DPYSL3Q14195 570 aa16.38■□□□□ 0.21
MKS1-204ENST00000537529 SV2CQ496J9 727 aa16.38■□□□□ 0.21
MKS1-204ENST00000537529 BOLA3Q53S33 107 aa16.38■□□□□ 0.21
MKS1-204ENST00000537529 XKR4Q5GH76 650 aa16.38■□□□□ 0.21
MKS1-204ENST00000537529 UBXN11Q5T124 520 aa16.38■□□□□ 0.21
MKS1-204ENST00000537529 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.38■□□□□ 0.21
MKS1-204ENST00000537529 TBCBQ99426 244 aa16.38■□□□□ 0.21
MKS1-204ENST00000537529 KLK14Q9P0G3 267 aa16.38■□□□□ 0.21
MKS1-204ENST00000537529 KPNA7A9QM74 516 aa16.38■□□□□ 0.21
MKS1-204ENST00000537529 ALOX15BO15296 676 aa16.38■□□□□ 0.21
MKS1-204ENST00000537529 TAF6P49848 677 aa16.38■□□□□ 0.21
MKS1-204ENST00000537529 ZNF157P51786 506 aaPredicted RBP16.38■□□□□ 0.21
MKS1-204ENST00000537529 GDF10P55107 478 aa16.38■□□□□ 0.21
MKS1-204ENST00000537529 ZNF200P98182 395 aaPredicted RBP16.38■□□□□ 0.21
MKS1-204ENST00000537529 ATP11AP98196 1134 aa16.38■□□□□ 0.21
MKS1-204ENST00000537529 ROR1Q01973 937 aa16.38■□□□□ 0.21
MKS1-204ENST00000537529 NOMO1Q15155 1222 aa16.38■□□□□ 0.21
MKS1-204ENST00000537529 FSCN1Q16658 493 aaKnown RBP16.38■□□□□ 0.21
MKS1-204ENST00000537529 HIF1AQ16665 826 aa16.38■□□□□ 0.21
MKS1-204ENST00000537529 CCDC142Q17RM4 750 aa16.38■□□□□ 0.21
MKS1-204ENST00000537529 CRYBG2Q8N1P7 616 aa16.38■□□□□ 0.21
MKS1-204ENST00000537529 SPATA18Q8TC71 538 aa16.38■□□□□ 0.21
MKS1-204ENST00000537529 FAM172AQ8WUF8 416 aa16.38■□□□□ 0.21
MKS1-204ENST00000537529 DPEP3Q9H4B8 488 aa16.38■□□□□ 0.21
MKS1-204ENST00000537529 NGRNQ9NPE2 291 aaKnown RBP16.38■□□□□ 0.21
MKS1-204ENST00000537529 GJD2Q9UKL4 321 aa16.38■□□□□ 0.21
MKS1-204ENST00000537529 EXOC1LA0A1B0GW35 172 aa16.37■□□□□ 0.21
MKS1-204ENST00000537529 ANKRD65E5RJM6 399 aa16.37■□□□□ 0.21
MKS1-204ENST00000537529 PAPSS1O43252 624 aaPredicted RBP16.37■□□□□ 0.21
MKS1-204ENST00000537529 RBP3P10745 1247 aa16.37■□□□□ 0.21
MKS1-204ENST00000537529 RPL22P35268 128 aaKnown RBP16.37■□□□□ 0.21
MKS1-204ENST00000537529 GNL1P36915 607 aaPredicted RBP16.37■□□□□ 0.21
MKS1-204ENST00000537529 SCNN1AP37088 669 aa16.37■□□□□ 0.21
MKS1-204ENST00000537529 ARL4CP56559 192 aa16.37■□□□□ 0.21
MKS1-204ENST00000537529 PDIA2Q13087 525 aaKnown RBP16.37■□□□□ 0.21
MKS1-204ENST00000537529 MMRN1Q13201 1228 aa16.37■□□□□ 0.21
MKS1-204ENST00000537529 QPCTQ16769 361 aa16.37■□□□□ 0.21
MKS1-204ENST00000537529 GKAP1Q5VSY0 366 aaPredicted RBP16.37■□□□□ 0.21
MKS1-204ENST00000537529 C17orf99Q6UX52 265 aa16.37■□□□□ 0.21
MKS1-204ENST00000537529 YTHDF3Q7Z739 585 aaKnown RBP16.37■□□□□ 0.21
MKS1-204ENST00000537529 VSIG1Q86XK7 387 aa16.37■□□□□ 0.21
MKS1-204ENST00000537529 C10orf67Q8IYJ2 551 aa16.37■□□□□ 0.21
MKS1-204ENST00000537529 CACNA2D3Q8IZS8 1091 aa16.37■□□□□ 0.21
MKS1-204ENST00000537529 C7orf31Q8N865 590 aa16.37■□□□□ 0.21
MKS1-204ENST00000537529 ANKRD52Q8NB46 1076 aa16.37■□□□□ 0.21
MKS1-204ENST00000537529 KBTBD7Q8WVZ9 684 aa16.37■□□□□ 0.21
MKS1-204ENST00000537529 PPCSQ9HAB8 311 aa16.37■□□□□ 0.21
MKS1-204ENST00000537529 CYLDQ9NQC7 956 aa16.37■□□□□ 0.21
MKS1-204ENST00000537529 DDX20Q9UHI6 824 aaKnown RBP16.37■□□□□ 0.21
MKS1-204ENST00000537529 NAALADL1Q9UQQ1 740 aa16.37■□□□□ 0.21
MKS1-204ENST00000537529 ACTL7BQ9Y614 415 aa16.37■□□□□ 0.21
MKS1-204ENST00000537529 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.37■□□□□ 0.21
MKS1-204ENST00000537529 TMEM120BA0PK00 339 aa16.36■□□□□ 0.21
MKS1-204ENST00000537529 DCAF8L1A6NGE4 600 aa16.36■□□□□ 0.21
MKS1-204ENST00000537529 CAPN15O75808 1086 aa16.36■□□□□ 0.21
MKS1-204ENST00000537529 ADORA2BP29275 332 aa16.36■□□□□ 0.21
MKS1-204ENST00000537529 MAGEA9P43362 315 aa16.36■□□□□ 0.21
MKS1-204ENST00000537529 NR1H3Q13133 447 aa16.36■□□□□ 0.21
MKS1-204ENST00000537529 SCYL2Q6P3W7 929 aa16.36■□□□□ 0.21
MKS1-204ENST00000537529 UNC45BQ8IWX7 931 aa16.36■□□□□ 0.21
MKS1-204ENST00000537529 SCUBE3Q8IX30 993 aa16.36■□□□□ 0.21
MKS1-204ENST00000537529 CCDC13Q8IYE1 715 aa16.36■□□□□ 0.21
MKS1-204ENST00000537529 ZBED8Q8IZ13 594 aa16.36■□□□□ 0.21
MKS1-204ENST00000537529 FAM71DQ8N9W8 422 aa16.36■□□□□ 0.21
MKS1-204ENST00000537529 APPL2Q8NEU8 664 aa16.36■□□□□ 0.21
MKS1-204ENST00000537529 CPT1BQ92523 772 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms