RNA–Protein interactions for RNA: ENST00000537435.2

USP44-203, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-203ENST00000537435 PLEKHG4Q58EX7 1191 aa14.97□□□□□ -0.01
USP44-203ENST00000537435 CELF3Q5SZQ8 465 aaKnown RBP14.97□□□□□ -0.01
USP44-203ENST00000537435 FAM182AQ5T1J6 154 aa14.97□□□□□ -0.01
USP44-203ENST00000537435 SYCP2LQ5T4T6 812 aa14.97□□□□□ -0.01
USP44-203ENST00000537435 SH3PXD2AQ5TCZ1 1133 aa14.97□□□□□ -0.01
USP44-203ENST00000537435 SMYD5Q6GMV2 418 aa14.97□□□□□ -0.01
USP44-203ENST00000537435 DARS2Q6PI48 645 aaKnown RBP14.97□□□□□ -0.01
USP44-203ENST00000537435 DPH6Q7L8W6 267 aa14.97□□□□□ -0.01
USP44-203ENST00000537435 PLPPR4Q7Z2D5 763 aa14.97□□□□□ -0.01
USP44-203ENST00000537435 CYTH2Q99418 400 aa14.97□□□□□ -0.01
USP44-203ENST00000537435 ZFP69BQ9UJL9 534 aa14.97□□□□□ -0.01
USP44-203ENST00000537435 TNFSF13BQ9Y275 285 aa14.97□□□□□ -0.01
USP44-203ENST00000537435 ZBTB7AO95365 584 aa14.96□□□□□ -0.01
USP44-203ENST00000537435 MT-ND3P03897 115 aa14.96□□□□□ -0.01
USP44-203ENST00000537435 IQCF3P0C7M6 154 aa14.96□□□□□ -0.01
USP44-203ENST00000537435 TROVE2P10155 538 aaKnown RBP eCLIP14.96□□□□□ -0.01
USP44-203ENST00000537435 GABRB2P47870 512 aa14.96□□□□□ -0.01
USP44-203ENST00000537435 CDH6P55285 790 aa14.96□□□□□ -0.01
USP44-203ENST00000537435 NOMO1Q15155 1222 aa14.96□□□□□ -0.01
USP44-203ENST00000537435 RAB6CQ53S08 254 aa14.96□□□□□ -0.01
USP44-203ENST00000537435 SLC45A4Q5BKX6 768 aa14.96□□□□□ -0.01
USP44-203ENST00000537435 JADE1Q6IE81 842 aa14.96□□□□□ -0.01
USP44-203ENST00000537435 EFCAB12Q6NXP0 572 aa14.96□□□□□ -0.01
USP44-203ENST00000537435 UBA3Q8TBC4 463 aa14.96□□□□□ -0.01
USP44-203ENST00000537435 RAB6CQ9H0N0 254 aa14.96□□□□□ -0.01
USP44-203ENST00000537435 MANSC1Q9H8J5 431 aa14.96□□□□□ -0.01
USP44-203ENST00000537435 ALG13Q9NP73 1137 aaKnown RBP14.96□□□□□ -0.01
USP44-203ENST00000537435 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.96□□□□□ -0.01
USP44-203ENST00000537435 DCTN4Q9UJW0 460 aa14.96□□□□□ -0.01
USP44-203ENST00000537435 KBTBD13C9JR72 458 aa14.95□□□□□ -0.02
USP44-203ENST00000537435 PIK3R2O00459 728 aa14.95□□□□□ -0.02
USP44-203ENST00000537435 PGK2P07205 417 aa14.95□□□□□ -0.02
USP44-203ENST00000537435 STIP1P31948 543 aaKnown RBP14.95□□□□□ -0.02
USP44-203ENST00000537435 PTK7Q13308 1070 aa14.95□□□□□ -0.02
USP44-203ENST00000537435 RFWD2Q8NHY2 731 aa14.95□□□□□ -0.02
USP44-203ENST00000537435 PTPRN2Q92932 1015 aa14.95□□□□□ -0.02
USP44-203ENST00000537435 HEXIM2Q96MH2 286 aaKnown RBP14.95□□□□□ -0.02
USP44-203ENST00000537435 SPATA33Q96N06 139 aa14.95□□□□□ -0.02
USP44-203ENST00000537435 VPS11Q9H270 941 aa14.95□□□□□ -0.02
USP44-203ENST00000537435 IQANK1A0A1B0GTG1 560 aa14.95□□□□□ -0.02
USP44-203ENST00000537435 TCRBV9S1A1TA0A576 114 aa14.95□□□□□ -0.02
USP44-203ENST00000537435 SOCS7O14512 581 aa14.95□□□□□ -0.02
USP44-203ENST00000537435 LPXNO60711 386 aa14.95□□□□□ -0.02
USP44-203ENST00000537435 CSDE1O75534 798 aaKnown RBP14.95□□□□□ -0.02
USP44-203ENST00000537435 STAG3L1P0CL83 205 aa14.95□□□□□ -0.02
USP44-203ENST00000537435 PCK1P35558 622 aa14.95□□□□□ -0.02
USP44-203ENST00000537435 RASSF2P50749 326 aa14.95□□□□□ -0.02
USP44-203ENST00000537435 ZNF143P52747 638 aaPredicted RBP14.95□□□□□ -0.02
USP44-203ENST00000537435 KBTBD12Q3ZCT8 623 aa14.95□□□□□ -0.02
USP44-203ENST00000537435 GADL1Q6ZQY3 521 aa14.95□□□□□ -0.02
USP44-203ENST00000537435 MTDHQ86UE4 582 aaKnown RBP14.95□□□□□ -0.02
USP44-203ENST00000537435 ZNF398Q8TD17 642 aa14.95□□□□□ -0.02
USP44-203ENST00000537435 COPS5Q92905 334 aa14.95□□□□□ -0.02
USP44-203ENST00000537435 TBC1D10AQ9BXI6 508 aa14.95□□□□□ -0.02
USP44-203ENST00000537435 ASCC2Q9H1I8 757 aaPredicted RBP14.95□□□□□ -0.02
USP44-203ENST00000537435 NUMBLQ9Y6R0 609 aa14.95□□□□□ -0.02
USP44-203ENST00000537435 H7C0C1 242 aa14.94□□□□□ -0.02
USP44-203ENST00000537435 ENDOD1O94919 500 aa14.94□□□□□ -0.02
USP44-203ENST00000537435 VDRP11473 427 aa14.94□□□□□ -0.02
USP44-203ENST00000537435 GPD1P21695 349 aa14.94□□□□□ -0.02
USP44-203ENST00000537435 ATP5OP48047 213 aa14.94□□□□□ -0.02
USP44-203ENST00000537435 YWHAGP61981 247 aaKnown RBP eCLIP14.94□□□□□ -0.02
USP44-203ENST00000537435 ZNF200P98182 395 aaPredicted RBP14.94□□□□□ -0.02
USP44-203ENST00000537435 KCNJ11Q14654 390 aa14.94□□□□□ -0.02
USP44-203ENST00000537435 C15orf59Q2T9L4 293 aaPredicted RBP14.94□□□□□ -0.02
USP44-203ENST00000537435 SPDYAQ5MJ70 313 aa14.94□□□□□ -0.02
USP44-203ENST00000537435 TRNP1Q6NT89 227 aa14.94□□□□□ -0.02
USP44-203ENST00000537435 C1orf228Q6PIY5 440 aa14.94□□□□□ -0.02
USP44-203ENST00000537435 DLK2Q6UY11 383 aa14.94□□□□□ -0.02
USP44-203ENST00000537435 CYP4V2Q6ZWL3 525 aaPredicted RBP14.94□□□□□ -0.02
USP44-203ENST00000537435 LONP2Q86WA8 852 aa14.94□□□□□ -0.02
USP44-203ENST00000537435 FAM13CQ8NE31 585 aa14.94□□□□□ -0.02
USP44-203ENST00000537435 CXorf38Q8TB03 319 aa14.94□□□□□ -0.02
USP44-203ENST00000537435 SLC44A1Q8WWI5 657 aa14.94□□□□□ -0.02
USP44-203ENST00000537435 RXFP2Q8WXD0 754 aa14.94□□□□□ -0.02
USP44-203ENST00000537435 FAF2Q96CS3 445 aa14.94□□□□□ -0.02
USP44-203ENST00000537435 FAXDC2Q96IV6 333 aa14.94□□□□□ -0.02
USP44-203ENST00000537435 SERAC1Q96JX3 654 aa14.94□□□□□ -0.02
USP44-203ENST00000537435 KANSL3Q9P2N6 904 aa14.94□□□□□ -0.02
USP44-203ENST00000537435 PPP2R3BQ9Y5P8 575 aa14.94□□□□□ -0.02
USP44-203ENST00000537435 TEX264Q9Y6I9 313 aa14.94□□□□□ -0.02
USP44-203ENST00000537435 IKBKGQ9Y6K9 419 aa14.94□□□□□ -0.02
USP44-203ENST00000537435 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.94□□□□□ -0.02
USP44-203ENST00000537435 HMGCRP04035 888 aa14.94□□□□□ -0.02
USP44-203ENST00000537435 INHBAP08476 426 aa14.94□□□□□ -0.02
USP44-203ENST00000537435 PDGFRAP16234 1089 aa14.94□□□□□ -0.02
USP44-203ENST00000537435 EPHB2P29323 1055 aa14.94□□□□□ -0.02
USP44-203ENST00000537435 FAAP100Q0VG06 881 aa14.94□□□□□ -0.02
USP44-203ENST00000537435 CDO1Q16878 200 aa14.94□□□□□ -0.02
USP44-203ENST00000537435 OR6B2Q6IFH4 312 aa14.94□□□□□ -0.02
USP44-203ENST00000537435 LRRC6Q86X45 466 aa14.94□□□□□ -0.02
USP44-203ENST00000537435 FBXO16Q8IX29 292 aaPredicted RBP14.94□□□□□ -0.02
USP44-203ENST00000537435 PIWIL1Q96J94 861 aaKnown RBP14.94□□□□□ -0.02
USP44-203ENST00000537435 FGD4Q96M96 766 aa14.94□□□□□ -0.02
USP44-203ENST00000537435 ZNF570Q96NI8 536 aa14.94□□□□□ -0.02
USP44-203ENST00000537435 CNPY3Q9BT09 278 aa14.94□□□□□ -0.02
USP44-203ENST00000537435 C2CD4BA6NLJ0 364 aa14.93□□□□□ -0.02
USP44-203ENST00000537435 AVILO75366 819 aa14.93□□□□□ -0.02
USP44-203ENST00000537435 TFDP2Q14188 446 aa14.93□□□□□ -0.02
USP44-203ENST00000537435 MAP1SQ66K74 1059 aaPredicted RBP14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms