RNA–Protein interactions for RNA: ENST00000536429.1

PRKDC-206, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-206ENST00000536429 HEXIM2Q96MH2 286 aaKnown RBP13.94□□□□□ -0.18
PRKDC-206ENST00000536429 RNF38Q9H0F5 515 aa13.94□□□□□ -0.18
PRKDC-206ENST00000536429 LTB4R2Q9NPC1 389 aa13.94□□□□□ -0.18
PRKDC-206ENST00000536429 TRPV5Q9NQA5 729 aa13.94□□□□□ -0.18
PRKDC-206ENST00000536429 HPS4Q9NQG7 708 aa13.94□□□□□ -0.18
PRKDC-206ENST00000536429 GMIPQ9P107 970 aa13.94□□□□□ -0.18
PRKDC-206ENST00000536429 CHORDC1Q9UHD1 332 aaPredicted RBP13.94□□□□□ -0.18
PRKDC-206ENST00000536429 SIT1Q9Y3P8 196 aa13.94□□□□□ -0.18
PRKDC-206ENST00000536429 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.94□□□□□ -0.18
PRKDC-206ENST00000536429 PIAS3Q9Y6X2 628 aa13.94□□□□□ -0.18
PRKDC-206ENST00000536429 OTOL1A6NHN0 477 aaPredicted RBP13.93□□□□□ -0.18
PRKDC-206ENST00000536429 FAM170BA6NMN3 283 aa13.93□□□□□ -0.18
PRKDC-206ENST00000536429 SOBPA7XYQ1 873 aa13.93□□□□□ -0.18
PRKDC-206ENST00000536429 GALR2O43603 387 aaPredicted RBP13.93□□□□□ -0.18
PRKDC-206ENST00000536429 RTN3O95197 1032 aaPredicted RBP13.93□□□□□ -0.18
PRKDC-206ENST00000536429 OAS1P00973 400 aaKnown RBP13.93□□□□□ -0.18
PRKDC-206ENST00000536429 CALCAP01258 141 aa13.93□□□□□ -0.18
PRKDC-206ENST00000536429 CCDC192P0DO97 292 aa13.93□□□□□ -0.18
PRKDC-206ENST00000536429 ARSAP15289 507 aa13.93□□□□□ -0.18
PRKDC-206ENST00000536429 HDCP19113 662 aa13.93□□□□□ -0.18
PRKDC-206ENST00000536429 ACO1P21399 889 aaKnown RBP13.93□□□□□ -0.18
PRKDC-206ENST00000536429 USP4Q13107 963 aa13.93□□□□□ -0.18
PRKDC-206ENST00000536429 FZD5Q13467 585 aa13.93□□□□□ -0.18
PRKDC-206ENST00000536429 ZNF268Q14587 947 aaPredicted RBP13.93□□□□□ -0.18
PRKDC-206ENST00000536429 ZNF77Q15935 545 aa13.93□□□□□ -0.18
PRKDC-206ENST00000536429 TXNDC11Q6PKC3 985 aa13.93□□□□□ -0.18
PRKDC-206ENST00000536429 RRAGAQ7L523 313 aa13.93□□□□□ -0.18
PRKDC-206ENST00000536429 CREBRFQ8IUR6 639 aa13.93□□□□□ -0.18
PRKDC-206ENST00000536429 DTWD2Q8NBA8 298 aa13.93□□□□□ -0.18
PRKDC-206ENST00000536429 SH3RF2Q8TEC5 729 aa13.93□□□□□ -0.18
PRKDC-206ENST00000536429 NT5C1BQ96P26 610 aa13.93□□□□□ -0.18
PRKDC-206ENST00000536429 FAM83CQ9BQN1 747 aa13.93□□□□□ -0.18
PRKDC-206ENST00000536429 GKN1Q9NS71 199 aa13.93□□□□□ -0.18
PRKDC-206ENST00000536429 ZMYM5Q9UJ78 669 aa13.93□□□□□ -0.18
PRKDC-206ENST00000536429 ARIH1Q9Y4X5 557 aaPredicted RBP13.93□□□□□ -0.18
PRKDC-206ENST00000536429 COL4A2P08572 1712 aa13.93□□□□□ -0.18
PRKDC-206ENST00000536429 FAM92AA1XBS5 289 aa13.92□□□□□ -0.18
PRKDC-206ENST00000536429 H0Y858 1186 aa13.92□□□□□ -0.18
PRKDC-206ENST00000536429 RNF225M0QZC1 329 aaPredicted RBP13.92□□□□□ -0.18
PRKDC-206ENST00000536429 SCAMP3O14828 347 aaKnown RBP13.92□□□□□ -0.18
PRKDC-206ENST00000536429 P4HA2O15460 535 aa13.92□□□□□ -0.18
PRKDC-206ENST00000536429 FGFR1OPO95684 399 aaKnown RBP13.92□□□□□ -0.18
PRKDC-206ENST00000536429 OLFM2O95897 454 aa13.92□□□□□ -0.18
PRKDC-206ENST00000536429 USP17L7P0C7H9 530 aa13.92□□□□□ -0.18
PRKDC-206ENST00000536429 ZDHHC11BP0C7U3 371 aa13.92□□□□□ -0.18
PRKDC-206ENST00000536429 APBA1Q02410 837 aa13.92□□□□□ -0.18
PRKDC-206ENST00000536429 NHLH1Q02575 133 aa13.92□□□□□ -0.18
PRKDC-206ENST00000536429 MTF1Q14872 753 aa13.92□□□□□ -0.18
PRKDC-206ENST00000536429 ARHGAP29Q52LW3 1261 aa13.92□□□□□ -0.18
PRKDC-206ENST00000536429 HSP90AA4PQ58FG1 418 aa13.92□□□□□ -0.18
PRKDC-206ENST00000536429 ZNF852Q6ZMS4 543 aa13.92□□□□□ -0.18
PRKDC-206ENST00000536429 RBM43Q6ZSC3 357 aaKnown RBP13.92□□□□□ -0.18
PRKDC-206ENST00000536429 TTC30AQ86WT1 665 aa13.92□□□□□ -0.18
PRKDC-206ENST00000536429 PPM1KQ8N3J5 372 aa13.92□□□□□ -0.18
PRKDC-206ENST00000536429 EHBP1Q8NDI1 1231 aa13.92□□□□□ -0.18
PRKDC-206ENST00000536429 CHFRQ96EP1 664 aa13.92□□□□□ -0.18
PRKDC-206ENST00000536429 KREMEN1Q96MU8 473 aa13.92□□□□□ -0.18
PRKDC-206ENST00000536429 SLITRK1Q96PX8 696 aa13.92□□□□□ -0.18
PRKDC-206ENST00000536429 PHOX2BQ99453 314 aa13.92□□□□□ -0.18
PRKDC-206ENST00000536429 CRACR2AQ9BSW2 395 aa13.92□□□□□ -0.18
PRKDC-206ENST00000536429 DUSP16Q9BY84 665 aa13.92□□□□□ -0.18
PRKDC-206ENST00000536429 INTS2Q9H0H0 1204 aaKnown RBP13.92□□□□□ -0.18
PRKDC-206ENST00000536429 KCNH6Q9H252 994 aa13.92□□□□□ -0.18
PRKDC-206ENST00000536429 EBF3Q9H4W6 596 aa13.92□□□□□ -0.18
PRKDC-206ENST00000536429 KIF9Q9HAQ2 790 aa13.92□□□□□ -0.18
PRKDC-206ENST00000536429 FAM86C1Q9NVL1 165 aa13.92□□□□□ -0.18
PRKDC-206ENST00000536429 OSER1Q9NX31 292 aa13.92□□□□□ -0.18
PRKDC-206ENST00000536429 SMPD4Q9NXE4 827 aa13.92□□□□□ -0.18
PRKDC-206ENST00000536429 EHD2Q9NZN4 543 aa13.92□□□□□ -0.18
PRKDC-206ENST00000536429 NDRG2Q9UN36 371 aaKnown RBP13.92□□□□□ -0.18
PRKDC-206ENST00000536429 ARHGAP26Q9UNA1 814 aa13.92□□□□□ -0.18
PRKDC-206ENST00000536429 WNT6Q9Y6F9 365 aa13.92□□□□□ -0.18
PRKDC-206ENST00000536429 GREB1Q4ZG55 1949 aa13.92□□□□□ -0.18
PRKDC-206ENST00000536429 TULP2O00295 520 aa13.91□□□□□ -0.18
PRKDC-206ENST00000536429 CYP26A1O43174 497 aa13.91□□□□□ -0.18
PRKDC-206ENST00000536429 COCHO43405 550 aa13.91□□□□□ -0.18
PRKDC-206ENST00000536429 TBXAS1P24557 533 aaPredicted RBP13.91□□□□□ -0.18
PRKDC-206ENST00000536429 KPNA1P52294 538 aaPredicted RBP13.91□□□□□ -0.18
PRKDC-206ENST00000536429 GOLGA7BQ2TAP0 167 aa13.91□□□□□ -0.18
PRKDC-206ENST00000536429 ARHGAP17Q68EM7 881 aa13.91□□□□□ -0.18
PRKDC-206ENST00000536429 NAIF1Q69YI7 327 aaPredicted RBP13.91□□□□□ -0.18
PRKDC-206ENST00000536429 GJB7Q6PEY0 223 aa13.91□□□□□ -0.18
PRKDC-206ENST00000536429 TMEM270Q6UE05 265 aa13.91□□□□□ -0.18
PRKDC-206ENST00000536429 TTC39CQ8N584 583 aa13.91□□□□□ -0.18
PRKDC-206ENST00000536429 CSGALNACT1Q8TDX6 532 aa13.91□□□□□ -0.18
PRKDC-206ENST00000536429 TFAP2BQ92481 460 aa13.91□□□□□ -0.18
PRKDC-206ENST00000536429 FAM3CQ92520 227 aa13.91□□□□□ -0.18
PRKDC-206ENST00000536429 ZSWIM1Q9BR11 485 aa13.91□□□□□ -0.18
PRKDC-206ENST00000536429 LINC00597Q9H2U6 94 aa13.91□□□□□ -0.18
PRKDC-206ENST00000536429 CCSER2Q9H7U1 834 aa13.91□□□□□ -0.18
PRKDC-206ENST00000536429 NMUR1Q9HB89 426 aa13.91□□□□□ -0.18
PRKDC-206ENST00000536429 THG1LQ9NWX6 298 aaKnown RBP13.91□□□□□ -0.18
PRKDC-206ENST00000536429 CPQQ9Y646 472 aa13.91□□□□□ -0.18
PRKDC-206ENST00000536429 USP34Q70CQ2 3546 aa13.91□□□□□ -0.18
PRKDC-206ENST00000536429 OBSL1O75147 1896 aa13.91□□□□□ -0.18
PRKDC-206ENST00000536429 NUP210Q8TEM1 1887 aaPredicted RBP13.91□□□□□ -0.18
PRKDC-206ENST00000536429 SPECC1L-ADORA2AF8WAN1 911 aa13.9□□□□□ -0.18
PRKDC-206ENST00000536429 LEFTY2O00292 366 aa13.9□□□□□ -0.18
PRKDC-206ENST00000536429 TBX18O95935 607 aa13.9□□□□□ -0.18
PRKDC-206ENST00000536429 CD19P15391 556 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms