RNA–Protein interactions for RNA: ENST00000536301.1

CHD4-205, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 107 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-205ENST00000536301 ZSWIM2Q8NEG5 633 aa5.61□□□□□ -1.51
CHD4-205ENST00000536301 ERMNQ8TAM6 284 aa5.61□□□□□ -1.51
CHD4-205ENST00000536301 SPATA18Q8TC71 538 aa5.61□□□□□ -1.51
CHD4-205ENST00000536301 C2orf15Q8WU43 125 aaKnown RBP5.61□□□□□ -1.51
CHD4-205ENST00000536301 SPIRE2Q8WWL2 714 aa5.61□□□□□ -1.51
CHD4-205ENST00000536301 AHCTF1Q8WYP5 2266 aa5.61□□□□□ -1.51
CHD4-205ENST00000536301 EXOC4Q96A65 974 aa5.61□□□□□ -1.51
CHD4-205ENST00000536301 P2RY11Q96G91 374 aa5.61□□□□□ -1.51
CHD4-205ENST00000536301 TRMT2BQ96GJ1 504 aaKnown RBP5.61□□□□□ -1.51
CHD4-205ENST00000536301 ZNF419Q96HQ0 510 aaPredicted RBP5.61□□□□□ -1.51
CHD4-205ENST00000536301 MYRFLQ96LU7 910 aa5.61□□□□□ -1.51
CHD4-205ENST00000536301 PNKPQ96T60 521 aa5.61□□□□□ -1.51
CHD4-205ENST00000536301 PLIN2Q99541 437 aa5.61□□□□□ -1.51
CHD4-205ENST00000536301 NTPCRQ9BSD7 190 aaKnown RBP5.61□□□□□ -1.51
CHD4-205ENST00000536301 BRMS1Q9HCU9 246 aa5.61□□□□□ -1.51
CHD4-205ENST00000536301 DNMT3LQ9UJW3 386 aa5.61□□□□□ -1.51
CHD4-205ENST00000536301 CPSF3Q9UKF6 684 aaKnown RBP5.61□□□□□ -1.51
CHD4-205ENST00000536301 L1RE1Q9UN81 338 aa5.61□□□□□ -1.51
CHD4-205ENST00000536301 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.61□□□□□ -1.51
CHD4-205ENST00000536301 RBM19Q9Y4C8 960 aaKnown RBP5.61□□□□□ -1.51
CHD4-205ENST00000536301 CPQQ9Y646 472 aa5.61□□□□□ -1.51
CHD4-205ENST00000536301 PIEZO2Q9H5I5 2752 aa5.61□□□□□ -1.51
CHD4-205ENST00000536301 CKAP5Q14008 2032 aa5.6□□□□□ -1.51
CHD4-205ENST00000536301 A0A0A0MRY4 1105 aa5.6□□□□□ -1.51
CHD4-205ENST00000536301 MYMKA6NI61 221 aa5.6□□□□□ -1.51
CHD4-205ENST00000536301 KCNJ18B7U540 433 aa5.6□□□□□ -1.51
CHD4-205ENST00000536301 WASH3PC4AMC7 463 aa5.6□□□□□ -1.51
CHD4-205ENST00000536301 J3QKU1 62 aa5.6□□□□□ -1.51
CHD4-205ENST00000536301 TK2O00142 265 aa5.6□□□□□ -1.51
CHD4-205ENST00000536301 CBX4O00257 560 aa5.6□□□□□ -1.51
CHD4-205ENST00000536301 KCNK3O14649 394 aa5.6□□□□□ -1.51
CHD4-205ENST00000536301 XPOTO43592 962 aaKnown RBP5.6□□□□□ -1.51
CHD4-205ENST00000536301 CILPO75339 1184 aa5.6□□□□□ -1.51
CHD4-205ENST00000536301 ADH5P11766 374 aa5.6□□□□□ -1.51
CHD4-205ENST00000536301 PLS3P13797 630 aa5.6□□□□□ -1.51
CHD4-205ENST00000536301 MUTP22033 750 aa5.6□□□□□ -1.51
CHD4-205ENST00000536301 GRIA2P42262 883 aa5.6□□□□□ -1.51
CHD4-205ENST00000536301 DPP6P42658 865 aa5.6□□□□□ -1.51
CHD4-205ENST00000536301 TAF6P49848 677 aa5.6□□□□□ -1.51
CHD4-205ENST00000536301 LIG4P49917 911 aa5.6□□□□□ -1.51
CHD4-205ENST00000536301 FXR2P51116 673 aaKnown RBP eCLIP5.6□□□□□ -1.512e-9■■■■□ 25.9
CHD4-205ENST00000536301 CACNA2D1P54289 1103 aa5.6□□□□□ -1.51
CHD4-205ENST00000536301 NCKAP1LP55160 1127 aa5.6□□□□□ -1.51
CHD4-205ENST00000536301 PSMC1P62191 440 aaKnown RBP5.6□□□□□ -1.51
CHD4-205ENST00000536301 KCNB1Q14721 858 aa5.6□□□□□ -1.51
CHD4-205ENST00000536301 ME3Q16798 604 aa5.6□□□□□ -1.51
CHD4-205ENST00000536301 PTPRNQ16849 979 aa5.6□□□□□ -1.51
CHD4-205ENST00000536301 INTS6LQ5JSJ4 861 aaKnown RBP5.6□□□□□ -1.51
CHD4-205ENST00000536301 TTC38Q5R3I4 469 aa5.6□□□□□ -1.51
CHD4-205ENST00000536301 HAUS3Q68CZ6 603 aa5.6□□□□□ -1.51
CHD4-205ENST00000536301 LAYNQ6UX15 382 aa5.6□□□□□ -1.51
CHD4-205ENST00000536301 METTL23Q86XA0 190 aa5.6□□□□□ -1.51
CHD4-205ENST00000536301 DCP1BQ8IZD4 617 aaKnown RBP5.6□□□□□ -1.51
CHD4-205ENST00000536301 IPO4Q8TEX9 1081 aaKnown RBP5.6□□□□□ -1.51
CHD4-205ENST00000536301 LEO1Q8WVC0 666 aaPredicted RBP5.6□□□□□ -1.51
CHD4-205ENST00000536301 BICD1Q96G01 975 aa5.6□□□□□ -1.51
CHD4-205ENST00000536301 ZFRQ96KR1 1074 aaKnown RBP5.6□□□□□ -1.51
CHD4-205ENST00000536301 DRC1Q96MC2 740 aa5.6□□□□□ -1.51
CHD4-205ENST00000536301 FCRL3Q96P31 734 aaPredicted RBP5.6□□□□□ -1.51
CHD4-205ENST00000536301 HNRNPABQ99729 332 aaKnown RBP5.6□□□□□ -1.51
CHD4-205ENST00000536301 TM6SF1Q9BZW5 370 aa5.6□□□□□ -1.51
CHD4-205ENST00000536301 CCSER1Q9C0I3 900 aa5.6□□□□□ -1.51
CHD4-205ENST00000536301 GAREM1Q9H706 876 aa5.6□□□□□ -1.51
CHD4-205ENST00000536301 TM7SF3Q9NS93 570 aa5.6□□□□□ -1.51
CHD4-205ENST00000536301 TMEM30AQ9NV96 361 aa5.6□□□□□ -1.51
CHD4-205ENST00000536301 DDX43Q9NXZ2 648 aaKnown RBP5.6□□□□□ -1.51
CHD4-205ENST00000536301 DPP3Q9NY33 737 aa5.6□□□□□ -1.51
CHD4-205ENST00000536301 GMIPQ9P107 970 aa5.6□□□□□ -1.51
CHD4-205ENST00000536301 KIAA1522Q9P206 1035 aaPredicted RBP5.6□□□□□ -1.51
CHD4-205ENST00000536301 CFAP97Q9P2B7 532 aa5.6□□□□□ -1.51
CHD4-205ENST00000536301 UXTQ9UBK9 157 aaPredicted RBP5.6□□□□□ -1.51
CHD4-205ENST00000536301 LRWD1Q9UFC0 647 aa5.6□□□□□ -1.51
CHD4-205ENST00000536301 DSEQ9UL01 958 aa5.6□□□□□ -1.51
CHD4-205ENST00000536301 NME7Q9Y5B8 376 aa5.6□□□□□ -1.51
CHD4-205ENST00000536301 USP9XQ93008 2570 aaPredicted RBP5.6□□□□□ -1.51
CHD4-205ENST00000536301 DOCK9Q9BZ29 2069 aa5.59□□□□□ -1.51
CHD4-205ENST00000536301 A0A0B4J269 797 aa5.59□□□□□ -1.51
CHD4-205ENST00000536301 A0A1B0GVT2 93 aa5.59□□□□□ -1.51
CHD4-205ENST00000536301 TBC1D3BA6NDS4 549 aa5.59□□□□□ -1.51
CHD4-205ENST00000536301 ZNF840PA6NDX5 716 aa5.59□□□□□ -1.51
CHD4-205ENST00000536301 KPNA7A9QM74 516 aa5.59□□□□□ -1.51
CHD4-205ENST00000536301 PRRT4C9JH25 899 aa5.59□□□□□ -1.51
CHD4-205ENST00000536301 ARHGAP6O43182 974 aa5.59□□□□□ -1.51
CHD4-205ENST00000536301 TULP3O75386 442 aa5.59□□□□□ -1.51
CHD4-205ENST00000536301 OLFM2O95897 454 aa5.59□□□□□ -1.51
CHD4-205ENST00000536301 OAS1P00973 400 aaKnown RBP5.59□□□□□ -1.51
CHD4-205ENST00000536301 PIGRP01833 764 aa5.59□□□□□ -1.51
CHD4-205ENST00000536301 BDNFP23560 247 aa5.59□□□□□ -1.51
CHD4-205ENST00000536301 GUCY2CP25092 1073 aa5.59□□□□□ -1.51
CHD4-205ENST00000536301 POLR2BP30876 1174 aaKnown RBP5.59□□□□□ -1.51
CHD4-205ENST00000536301 NTSR1P30989 418 aa5.59□□□□□ -1.51
CHD4-205ENST00000536301 EIF2DP41214 584 aaKnown RBP5.59□□□□□ -1.51
CHD4-205ENST00000536301 TNFRSF4P43489 277 aa5.59□□□□□ -1.51
CHD4-205ENST00000536301 TOB1P50616 345 aaPredicted RBP5.59□□□□□ -1.51
CHD4-205ENST00000536301 SLC12A3P55017 1021 aa5.59□□□□□ -1.51
CHD4-205ENST00000536301 RPL10AP62906 217 aaKnown RBP5.59□□□□□ -1.51
CHD4-205ENST00000536301 SLC7A9P82251 487 aa5.59□□□□□ -1.51
CHD4-205ENST00000536301 IL9RQ01113 521 aa5.59□□□□□ -1.51
CHD4-205ENST00000536301 TSPY1Q01534 308 aa5.59□□□□□ -1.51
CHD4-205ENST00000536301 SEMG2Q02383 582 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms