RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 MORF4L2Q15014 288 aa14.01□□□□□ -0.17
VPS33B-202ENST00000535906 CDO1Q16878 200 aa14.01□□□□□ -0.17
VPS33B-202ENST00000535906 SOWAHAQ2M3V2 549 aa14.01□□□□□ -0.17
VPS33B-202ENST00000535906 HP1BP3Q5SSJ5 553 aaPredicted RBP14.01□□□□□ -0.17
VPS33B-202ENST00000535906 APBB1IPQ7Z5R6 666 aaPredicted RBP14.01□□□□□ -0.17
VPS33B-202ENST00000535906 TAX1BP1Q86VP1 789 aa14.01□□□□□ -0.17
VPS33B-202ENST00000535906 CYP4X1Q8N118 509 aa14.01□□□□□ -0.17
VPS33B-202ENST00000535906 BEST2Q8NFU1 509 aa14.01□□□□□ -0.17
VPS33B-202ENST00000535906 CNPY3Q9BT09 278 aa14.01□□□□□ -0.17
VPS33B-202ENST00000535906 FOXP3Q9BZS1 431 aa14.01□□□□□ -0.17
VPS33B-202ENST00000535906 SAMD15Q9P1V8 674 aa14.01□□□□□ -0.17
VPS33B-202ENST00000535906 CNTN3Q9P232 1028 aa14.01□□□□□ -0.17
VPS33B-202ENST00000535906 TMEM120BA0PK00 339 aa14□□□□□ -0.17
VPS33B-202ENST00000535906 CCT8L1PA6NM43 557 aa14□□□□□ -0.17
VPS33B-202ENST00000535906 GABBR2O75899 941 aa14□□□□□ -0.17
VPS33B-202ENST00000535906 VIMP08670 466 aaKnown RBP14□□□□□ -0.17
VPS33B-202ENST00000535906 IFNAR2P48551 515 aa14□□□□□ -0.17
VPS33B-202ENST00000535906 BEX3Q00994 111 aa14□□□□□ -0.17
VPS33B-202ENST00000535906 SNX17Q15036 470 aa14□□□□□ -0.17
VPS33B-202ENST00000535906 STILQ15468 1287 aa14□□□□□ -0.17
VPS33B-202ENST00000535906 C9orf57Q5W0N0 161 aa14□□□□□ -0.17
VPS33B-202ENST00000535906 RFX6Q8HWS3 928 aa14□□□□□ -0.17
VPS33B-202ENST00000535906 SCUBE3Q8IX30 993 aa14□□□□□ -0.17
VPS33B-202ENST00000535906 LRRC52Q8N7C0 313 aa14□□□□□ -0.17
VPS33B-202ENST00000535906 TTC13Q8NBP0 860 aa14□□□□□ -0.17
VPS33B-202ENST00000535906 SLC35F5Q8WV83 523 aa14□□□□□ -0.17
VPS33B-202ENST00000535906 CFAP57Q96MR6 1250 aa14□□□□□ -0.17
VPS33B-202ENST00000535906 DPEP3Q9H4B8 488 aa14□□□□□ -0.17
VPS33B-202ENST00000535906 KLK14Q9P0G3 267 aa14□□□□□ -0.17
VPS33B-202ENST00000535906 TBK1Q9UHD2 729 aa14□□□□□ -0.17
VPS33B-202ENST00000535906 PIN4Q9Y237 131 aaKnown RBP14□□□□□ -0.17
VPS33B-202ENST00000535906 ENDOD1O94919 500 aa14□□□□□ -0.17
VPS33B-202ENST00000535906 ATP11AP98196 1134 aa14□□□□□ -0.17
VPS33B-202ENST00000535906 CCDC142Q17RM4 750 aa14□□□□□ -0.17
VPS33B-202ENST00000535906 CCDC14Q49A88 953 aa14□□□□□ -0.17
VPS33B-202ENST00000535906 OLFML1Q6UWY5 402 aa14□□□□□ -0.17
VPS33B-202ENST00000535906 VSTM1Q6UX27 236 aa14□□□□□ -0.17
VPS33B-202ENST00000535906 UNC45BQ8IWX7 931 aa14□□□□□ -0.17
VPS33B-202ENST00000535906 OR6B3Q8NGW1 331 aa14□□□□□ -0.17
VPS33B-202ENST00000535906 KHSRPQ92945 711 aaKnown RBP eCLIP14□□□□□ -0.17
VPS33B-202ENST00000535906 RNF39Q9H2S5 420 aa14□□□□□ -0.17
VPS33B-202ENST00000535906 SLC40A1Q9NP59 571 aa14□□□□□ -0.17
VPS33B-202ENST00000535906 STAU2Q9NUL3 570 aaKnown RBP eCLIP14□□□□□ -0.17
VPS33B-202ENST00000535906 LGALS13Q9UHV8 139 aa14□□□□□ -0.17
VPS33B-202ENST00000535906 DYNC1LI1Q9Y6G9 523 aaKnown RBP14□□□□□ -0.17
VPS33B-202ENST00000535906 VGLL3A8MV65 326 aa13.99□□□□□ -0.17
VPS33B-202ENST00000535906 APOC4-APOC2K7ER74 178 aa13.99□□□□□ -0.17
VPS33B-202ENST00000535906 HAS3O00219 553 aa13.99□□□□□ -0.17
VPS33B-202ENST00000535906 APOC2P02655 101 aa13.99□□□□□ -0.17
VPS33B-202ENST00000535906 PSEN2P49810 448 aa13.99□□□□□ -0.17
VPS33B-202ENST00000535906 CDH6P55285 790 aa13.99□□□□□ -0.17
VPS33B-202ENST00000535906 PCBP1Q15365 356 aaKnown RBP eCLIP13.99□□□□□ -0.17
VPS33B-202ENST00000535906 CEP128Q6ZU80 1094 aa13.99□□□□□ -0.17
VPS33B-202ENST00000535906 DYDC1Q8WWB3 177 aa13.99□□□□□ -0.17
VPS33B-202ENST00000535906 PRCCQ92733 491 aaPredicted RBP13.99□□□□□ -0.17
VPS33B-202ENST00000535906 ELAC2Q9BQ52 826 aaKnown RBP13.99□□□□□ -0.17
VPS33B-202ENST00000535906 SLC4A5Q9BY07 1137 aa13.99□□□□□ -0.17
VPS33B-202ENST00000535906 B3GNT5Q9BYG0 378 aa13.99□□□□□ -0.17
VPS33B-202ENST00000535906 MIS12Q9H081 205 aa13.99□□□□□ -0.17
VPS33B-202ENST00000535906 KLC4Q9NSK0 619 aa13.99□□□□□ -0.17
VPS33B-202ENST00000535906 NAALADL1Q9UQQ1 740 aa13.99□□□□□ -0.17
VPS33B-202ENST00000535906 FARP1Q9Y4F1 1045 aaPredicted RBP13.99□□□□□ -0.17
VPS33B-202ENST00000535906 SMIM28A0A1B0GU29 152 aa13.99□□□□□ -0.17
VPS33B-202ENST00000535906 GOLGA8MH3BSY2 632 aa13.99□□□□□ -0.17
VPS33B-202ENST00000535906 CTCFP49711 727 aaPredicted RBP13.99□□□□□ -0.17
VPS33B-202ENST00000535906 NRLP54845 237 aa13.99□□□□□ -0.17
VPS33B-202ENST00000535906 HUNKP57058 714 aa13.99□□□□□ -0.17
VPS33B-202ENST00000535906 GAD2Q05329 585 aa13.99□□□□□ -0.17
VPS33B-202ENST00000535906 STAT4Q14765 748 aa13.99□□□□□ -0.17
VPS33B-202ENST00000535906 NPNTQ6UXI9 565 aa13.99□□□□□ -0.17
VPS33B-202ENST00000535906 TMEM110Q86TL2 294 aa13.99□□□□□ -0.17
VPS33B-202ENST00000535906 FRMD8P1Q9BZ68 369 aaPredicted RBP13.99□□□□□ -0.17
VPS33B-202ENST00000535906 RSAD1Q9HA92 442 aa13.99□□□□□ -0.17
VPS33B-202ENST00000535906 SHOC2Q9UQ13 582 aa13.99□□□□□ -0.17
VPS33B-202ENST00000535906 A8MXQ7 604 aa13.98□□□□□ -0.17
VPS33B-202ENST00000535906 PIRO00625 290 aa13.98□□□□□ -0.17
VPS33B-202ENST00000535906 SPTLC1O15269 473 aa13.98□□□□□ -0.17
VPS33B-202ENST00000535906 PAPSS1O43252 624 aaPredicted RBP13.98□□□□□ -0.17
VPS33B-202ENST00000535906 CDH16O75309 829 aa13.98□□□□□ -0.17
VPS33B-202ENST00000535906 BANF1O75531 89 aa13.98□□□□□ -0.17
VPS33B-202ENST00000535906 MYL3P08590 195 aa13.98□□□□□ -0.17
VPS33B-202ENST00000535906 ABHD2P08910 425 aa13.98□□□□□ -0.17
VPS33B-202ENST00000535906 PDGFRBP09619 1106 aa13.98□□□□□ -0.17
VPS33B-202ENST00000535906 CYP2B6P20813 491 aa13.98□□□□□ -0.17
VPS33B-202ENST00000535906 LMO2P25791 158 aa13.98□□□□□ -0.17
VPS33B-202ENST00000535906 RPL22P35268 128 aaKnown RBP13.98□□□□□ -0.17
VPS33B-202ENST00000535906 EIF3EP60228 445 aaKnown RBP13.98□□□□□ -0.17
VPS33B-202ENST00000535906 DPYSL3Q14195 570 aa13.98□□□□□ -0.17
VPS33B-202ENST00000535906 FBXO47Q5MNV8 452 aa13.98□□□□□ -0.17
VPS33B-202ENST00000535906 ZNF618Q5T7W0 954 aa13.98□□□□□ -0.17
VPS33B-202ENST00000535906 ANKRD22Q5VYY1 191 aa13.98□□□□□ -0.17
VPS33B-202ENST00000535906 TAB3Q8N5C8 712 aaPredicted RBP13.98□□□□□ -0.17
VPS33B-202ENST00000535906 C7orf31Q8N865 590 aa13.98□□□□□ -0.17
VPS33B-202ENST00000535906 SPATA18Q8TC71 538 aa13.98□□□□□ -0.17
VPS33B-202ENST00000535906 KBTBD7Q8WVZ9 684 aa13.98□□□□□ -0.17
VPS33B-202ENST00000535906 RSAD2Q8WXG1 361 aa13.98□□□□□ -0.17
VPS33B-202ENST00000535906 CPT1BQ92523 772 aa13.98□□□□□ -0.17
VPS33B-202ENST00000535906 CCDC77Q9BR77 488 aa13.98□□□□□ -0.17
VPS33B-202ENST00000535906 GOLGA2P5Q9HBQ8 144 aa13.98□□□□□ -0.17
VPS33B-202ENST00000535906 EURLQ9NYK6 297 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms