RNA–Protein interactions for RNA: ENST00000535717.1

CHD4-203, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 660 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-203ENST00000535717 CDC25CP30307 473 aa12.74□□□□□ -0.37
CHD4-203ENST00000535717 GBP2P32456 591 aaPredicted RBP12.74□□□□□ -0.37
CHD4-203ENST00000535717 STAT1P42224 750 aa12.74□□□□□ -0.37
CHD4-203ENST00000535717 SLC8A3P57103 927 aa12.74□□□□□ -0.37
CHD4-203ENST00000535717 BPIFB4P59827 614 aa12.74□□□□□ -0.37
CHD4-203ENST00000535717 BST2Q10589 180 aaKnown RBP12.74□□□□□ -0.37
CHD4-203ENST00000535717 IFRD2Q12894 506 aaPredicted RBP12.74□□□□□ -0.37
CHD4-203ENST00000535717 TEAD2Q15562 447 aa12.74□□□□□ -0.37
CHD4-203ENST00000535717 DENND1BQ6P3S1 775 aa12.74□□□□□ -0.37
CHD4-203ENST00000535717 CACNA2D4Q7Z3S7 1137 aa12.74□□□□□ -0.37
CHD4-203ENST00000535717 PIGZQ86VD9 579 aa12.74□□□□□ -0.37
CHD4-203ENST00000535717 GPIHBP1Q8IV16 184 aa12.74□□□□□ -0.37
CHD4-203ENST00000535717 NPAS3Q8IXF0 933 aa12.74□□□□□ -0.37
CHD4-203ENST00000535717 BAP1Q92560 729 aa12.74□□□□□ -0.37
CHD4-203ENST00000535717 SECISBP2LQ93073 1101 aaKnown RBP12.74□□□□□ -0.37
CHD4-203ENST00000535717 TTYH3Q9C0H2 523 aa12.74□□□□□ -0.37
CHD4-203ENST00000535717 ATXN3LQ9H3M9 355 aa12.74□□□□□ -0.37
CHD4-203ENST00000535717 UXTQ9UBK9 157 aaPredicted RBP12.74□□□□□ -0.37
CHD4-203ENST00000535717 CDH7Q9ULB5 785 aa12.74□□□□□ -0.37
CHD4-203ENST00000535717 NR2E1Q9Y466 385 aa12.74□□□□□ -0.37
CHD4-203ENST00000535717 DOCK8Q8NF50 2099 aa12.74□□□□□ -0.37
CHD4-203ENST00000535717 ZNF638Q14966 1978 aaKnown RBP12.73□□□□□ -0.37
CHD4-203ENST00000535717 FAM92AA1XBS5 289 aa12.73□□□□□ -0.37
CHD4-203ENST00000535717 C19orf67A6NJJ6 358 aa12.73□□□□□ -0.37
CHD4-203ENST00000535717 TPM3P06753 285 aa12.73□□□□□ -0.37
CHD4-203ENST00000535717 SETSIPP0DME0 302 aa12.73□□□□□ -0.37
CHD4-203ENST00000535717 LAMP2P13473 410 aa12.73□□□□□ -0.37
CHD4-203ENST00000535717 CYP11B1P15538 503 aa12.73□□□□□ -0.37
CHD4-203ENST00000535717 YWHAQP27348 245 aa12.73□□□□□ -0.37
CHD4-203ENST00000535717 PLA2G4AP47712 749 aa12.73□□□□□ -0.37
CHD4-203ENST00000535717 KIF11P52732 1056 aa12.73□□□□□ -0.37
CHD4-203ENST00000535717 CYP4F8P98187 520 aa12.73□□□□□ -0.37
CHD4-203ENST00000535717 PLCB2Q00722 1185 aa12.73□□□□□ -0.37
CHD4-203ENST00000535717 TAF10Q12962 218 aa12.73□□□□□ -0.37
CHD4-203ENST00000535717 MEA1Q16626 185 aa12.73□□□□□ -0.37
CHD4-203ENST00000535717 STXBP5Q5T5C0 1151 aa12.73□□□□□ -0.37
CHD4-203ENST00000535717 SARM1Q6SZW1 724 aa12.73□□□□□ -0.37
CHD4-203ENST00000535717 NOP9Q86U38 636 aaKnown RBP12.73□□□□□ -0.37
CHD4-203ENST00000535717 TDRD5Q8NAT2 981 aaKnown RBP12.73□□□□□ -0.37
CHD4-203ENST00000535717 ADAMTS19Q8TE59 1207 aa12.73□□□□□ -0.37
CHD4-203ENST00000535717 SLC35F5Q8WV83 523 aa12.73□□□□□ -0.37
CHD4-203ENST00000535717 DDX1Q92499 740 aaKnown RBP12.73□□□□□ -0.37
CHD4-203ENST00000535717 ACSF2Q96CM8 615 aaPredicted RBP12.73□□□□□ -0.37
CHD4-203ENST00000535717 MCRS1Q96EZ8 462 aa12.73□□□□□ -0.37
CHD4-203ENST00000535717 ZSWIM3Q96MP5 696 aa12.73□□□□□ -0.37
CHD4-203ENST00000535717 NECAB3Q96P71 396 aaPredicted RBP12.73□□□□□ -0.37
CHD4-203ENST00000535717 COMMD8Q9NX08 183 aa12.73□□□□□ -0.37
CHD4-203ENST00000535717 GDE1Q9NZC3 331 aa12.73□□□□□ -0.37
CHD4-203ENST00000535717 EHD2Q9NZN4 543 aa12.73□□□□□ -0.37
CHD4-203ENST00000535717 EPS15L1Q9UBC2 864 aa12.73□□□□□ -0.37
CHD4-203ENST00000535717 NOCTQ9UK39 431 aaKnown RBP12.73□□□□□ -0.37
CHD4-203ENST00000535717 PCDHGC3Q9UN70 934 aa12.73□□□□□ -0.37
CHD4-203ENST00000535717 NCOR1O75376 2440 aa12.72□□□□□ -0.37
CHD4-203ENST00000535717 GABBR2O75899 941 aa12.72□□□□□ -0.37
CHD4-203ENST00000535717 KRT9P35527 623 aa12.72□□□□□ -0.37
CHD4-203ENST00000535717 GPD2P43304 727 aa12.72□□□□□ -0.37
CHD4-203ENST00000535717 RGS7P49802 495 aa12.72□□□□□ -0.37
CHD4-203ENST00000535717 ARID5AQ03989 594 aa12.72□□□□□ -0.37
CHD4-203ENST00000535717 FIGNQ5HY92 759 aa12.72□□□□□ -0.37
CHD4-203ENST00000535717 RAB41Q5JT25 222 aa12.72□□□□□ -0.37
CHD4-203ENST00000535717 GPR158Q5T848 1215 aa12.72□□□□□ -0.37
CHD4-203ENST00000535717 PMF1Q6P1K2 205 aa12.72□□□□□ -0.37
CHD4-203ENST00000535717 PASD1Q8IV76 773 aa12.72□□□□□ -0.37
CHD4-203ENST00000535717 ZDHHC14Q8IZN3 488 aa12.72□□□□□ -0.37
CHD4-203ENST00000535717 EPS8L1Q8TE68 723 aa12.72□□□□□ -0.37
CHD4-203ENST00000535717 SLC20A1Q8WUM9 679 aa12.72□□□□□ -0.37
CHD4-203ENST00000535717 KCTD13Q8WZ19 329 aa12.72□□□□□ -0.37
CHD4-203ENST00000535717 FBXO32Q969P5 355 aa12.72□□□□□ -0.37
CHD4-203ENST00000535717 SLITRK1Q96PX8 696 aa12.72□□□□□ -0.37
CHD4-203ENST00000535717 GCNAQ96QF7 691 aa12.72□□□□□ -0.37
CHD4-203ENST00000535717 NUP58Q9BVL2 599 aa12.72□□□□□ -0.37
CHD4-203ENST00000535717 EDEM3Q9BZQ6 932 aa12.72□□□□□ -0.37
CHD4-203ENST00000535717 FBXO44Q9H4M3 255 aa12.72□□□□□ -0.37
CHD4-203ENST00000535717 CD320Q9NPF0 282 aa12.72□□□□□ -0.37
CHD4-203ENST00000535717 CHORDC1Q9UHD1 332 aaPredicted RBP12.72□□□□□ -0.37
CHD4-203ENST00000535717 CYTH4Q9UIA0 394 aa12.72□□□□□ -0.37
CHD4-203ENST00000535717 MYO6Q9UM54 1294 aa12.72□□□□□ -0.37
CHD4-203ENST00000535717 SCML2Q9UQR0 700 aa12.72□□□□□ -0.37
CHD4-203ENST00000535717 USP3Q9Y6I4 520 aa12.72□□□□□ -0.37
CHD4-203ENST00000535717 ZFP37Q9Y6Q3 630 aaPredicted RBP12.72□□□□□ -0.37
CHD4-203ENST00000535717 TRIOO75962 3097 aa12.72□□□□□ -0.37
CHD4-203ENST00000535717 OBSL1O75147 1896 aa12.72□□□□□ -0.37
CHD4-203ENST00000535717 ITIH6Q6UXX5 1313 aa12.71□□□□□ -0.37
CHD4-203ENST00000535717 DENND4CQ5VZ89 1909 aa12.71□□□□□ -0.37
CHD4-203ENST00000535717 A0A1W2PQJ5 194 aa12.71□□□□□ -0.37
CHD4-203ENST00000535717 ZNF840PA6NDX5 716 aa12.71□□□□□ -0.37
CHD4-203ENST00000535717 LRRC53A6NM62 1247 aa12.71□□□□□ -0.37
CHD4-203ENST00000535717 CHRNB2P17787 502 aa12.71□□□□□ -0.37
CHD4-203ENST00000535717 PGFP49763 221 aa12.71□□□□□ -0.37
CHD4-203ENST00000535717 PDE6CP51160 858 aa12.71□□□□□ -0.37
CHD4-203ENST00000535717 TKTL1P51854 596 aa12.71□□□□□ -0.37
CHD4-203ENST00000535717 ARHGAP15Q53QZ3 475 aa12.71□□□□□ -0.37
CHD4-203ENST00000535717 FAM78AQ5JUQ0 283 aa12.71□□□□□ -0.37
CHD4-203ENST00000535717 TAF3Q5VWG9 929 aa12.71□□□□□ -0.37
CHD4-203ENST00000535717 TXNDC8Q6A555 127 aa12.71□□□□□ -0.37
CHD4-203ENST00000535717 IRF2BP2Q7Z5L9 587 aa12.71□□□□□ -0.37
CHD4-203ENST00000535717 VSTM4Q8IW00 320 aa12.71□□□□□ -0.37
CHD4-203ENST00000535717 PLCD3Q8N3E9 789 aa12.71□□□□□ -0.37
CHD4-203ENST00000535717 WDTC1Q8N5D0 677 aa12.71□□□□□ -0.37
CHD4-203ENST00000535717 PDZD8Q8NEN9 1154 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms