RNA–Protein interactions for RNA: ENST00000535290.5

CLIP1-206, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-206ENST00000535290 HOXB2P14652 356 aa8.92□□□□□ -0.98
CLIP1-206ENST00000535290 JUPP14923 745 aa8.92□□□□□ -0.98
CLIP1-206ENST00000535290 CYP2F1P24903 491 aa8.92□□□□□ -0.98
CLIP1-206ENST00000535290 EIF2DP41214 584 aaKnown RBP8.92□□□□□ -0.98
CLIP1-206ENST00000535290 TNFSF9P41273 254 aa8.92□□□□□ -0.98
CLIP1-206ENST00000535290 CCDC173Q0VFZ6 552 aa8.92□□□□□ -0.98
CLIP1-206ENST00000535290 SMARCB1Q12824 385 aa8.92□□□□□ -0.98
CLIP1-206ENST00000535290 KCNB1Q14721 858 aa8.92□□□□□ -0.98
CLIP1-206ENST00000535290 ECM1Q16610 540 aa8.92□□□□□ -0.98
CLIP1-206ENST00000535290 SPATA1Q5VX52 437 aa8.92□□□□□ -0.98
CLIP1-206ENST00000535290 C9orf57Q5W0N0 161 aa8.92□□□□□ -0.98
CLIP1-206ENST00000535290 SPACA3Q8IXA5 215 aa8.92□□□□□ -0.98
CLIP1-206ENST00000535290 DAW1Q8N136 415 aa8.92□□□□□ -0.98
CLIP1-206ENST00000535290 ZNF513Q8N8E2 541 aaPredicted RBP8.92□□□□□ -0.98
CLIP1-206ENST00000535290 BAP1Q92560 729 aa8.92□□□□□ -0.98
CLIP1-206ENST00000535290 KCNB2Q92953 911 aa8.92□□□□□ -0.98
CLIP1-206ENST00000535290 TNFRSF25Q93038 417 aa8.92□□□□□ -0.98
CLIP1-206ENST00000535290 WBP1Q96G27 269 aa8.92□□□□□ -0.98
CLIP1-206ENST00000535290 TRMT2BQ96GJ1 504 aaKnown RBP8.92□□□□□ -0.98
CLIP1-206ENST00000535290 ACOX2Q99424 681 aa8.92□□□□□ -0.98
CLIP1-206ENST00000535290 GMIPQ9P107 970 aa8.92□□□□□ -0.98
CLIP1-206ENST00000535290 UXTQ9UBK9 157 aaPredicted RBP8.92□□□□□ -0.98
CLIP1-206ENST00000535290 ZNF638Q14966 1978 aaKnown RBP8.92□□□□□ -0.98
CLIP1-206ENST00000535290 A0A1B0GVT2 93 aa8.91□□□□□ -0.98
CLIP1-206ENST00000535290 PIRO00625 290 aa8.91□□□□□ -0.98
CLIP1-206ENST00000535290 SLC16A4O15374 487 aa8.91□□□□□ -0.98
CLIP1-206ENST00000535290 BCAT2O15382 392 aaPredicted RBP8.91□□□□□ -0.98
CLIP1-206ENST00000535290 NTRK1P04629 796 aa8.91□□□□□ -0.98
CLIP1-206ENST00000535290 NFICP08651 508 aa8.91□□□□□ -0.98
CLIP1-206ENST00000535290 RPA1P27694 616 aa8.91□□□□□ -0.98
CLIP1-206ENST00000535290 NTSR1P30989 418 aa8.91□□□□□ -0.98
CLIP1-206ENST00000535290 IL12RB1P42701 662 aa8.91□□□□□ -0.98
CLIP1-206ENST00000535290 CSRP3P50461 194 aa8.91□□□□□ -0.98
CLIP1-206ENST00000535290 PPP2R3AQ06190 1150 aa8.91□□□□□ -0.98
CLIP1-206ENST00000535290 MCL1Q07820 350 aa8.91□□□□□ -0.98
CLIP1-206ENST00000535290 TOB2Q14106 344 aaPredicted RBP8.91□□□□□ -0.98
CLIP1-206ENST00000535290 PREPLQ4J6C6 727 aaPredicted RBP8.91□□□□□ -0.98
CLIP1-206ENST00000535290 C6orf118Q5T5N4 469 aa8.91□□□□□ -0.98
CLIP1-206ENST00000535290 IL27RAQ6UWB1 636 aa8.91□□□□□ -0.98
CLIP1-206ENST00000535290 METTL23Q86XA0 190 aa8.91□□□□□ -0.98
CLIP1-206ENST00000535290 DCP1BQ8IZD4 617 aaKnown RBP8.91□□□□□ -0.98
CLIP1-206ENST00000535290 THEM5Q8N1Q8 247 aa8.91□□□□□ -0.98
CLIP1-206ENST00000535290 NAT16Q8N8M0 369 aa8.91□□□□□ -0.98
CLIP1-206ENST00000535290 IPO4Q8TEX9 1081 aaKnown RBP8.91□□□□□ -0.98
CLIP1-206ENST00000535290 FGF11Q92914 225 aa8.91□□□□□ -0.98
CLIP1-206ENST00000535290 MRGPRX1Q96LB2 322 aa8.91□□□□□ -0.98
CLIP1-206ENST00000535290 PYM1Q9BRP8 204 aaKnown RBP8.91□□□□□ -0.98
CLIP1-206ENST00000535290 KMT5AQ9NQR1 393 aa8.91□□□□□ -0.98
CLIP1-206ENST00000535290 SMPD4Q9NXE4 827 aa8.91□□□□□ -0.98
CLIP1-206ENST00000535290 DSEQ9UL01 958 aa8.91□□□□□ -0.98
CLIP1-206ENST00000535290 SNX14Q9Y5W7 946 aa8.91□□□□□ -0.98
CLIP1-206ENST00000535290 SLCO1B1Q9Y6L6 691 aa8.91□□□□□ -0.98
CLIP1-206ENST00000535290 MUC22E2RYF6 1773 aaPredicted RBP8.91□□□□□ -0.98
CLIP1-206ENST00000535290 CITO14578 2027 aa8.9□□□□□ -0.98
CLIP1-206ENST00000535290 ATMQ13315 3056 aa8.9□□□□□ -0.98
CLIP1-206ENST00000535290 DENND4CQ5VZ89 1909 aa8.9□□□□□ -0.98
CLIP1-206ENST00000535290 CEP192Q8TEP8 1941 aa8.9□□□□□ -0.98
CLIP1-206ENST00000535290 COL5A1P20908 1838 aaPredicted RBP8.9□□□□□ -0.98
CLIP1-206ENST00000535290 ANO9A1A5B4 782 aa8.9□□□□□ -0.98
CLIP1-206ENST00000535290 MEI4A8MW99 385 aa8.9□□□□□ -0.98
CLIP1-206ENST00000535290 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.9□□□□□ -0.98
CLIP1-206ENST00000535290 KCNK3O14649 394 aa8.9□□□□□ -0.98
CLIP1-206ENST00000535290 TRIM66O15016 1216 aa8.9□□□□□ -0.98
CLIP1-206ENST00000535290 TRIM24O15164 1050 aa8.9□□□□□ -0.98
CLIP1-206ENST00000535290 CLDN3O15551 220 aa8.9□□□□□ -0.98
CLIP1-206ENST00000535290 ZBTB24O43167 697 aaPredicted RBP8.9□□□□□ -0.98
CLIP1-206ENST00000535290 HIP1RO75146 1068 aa8.9□□□□□ -0.98
CLIP1-206ENST00000535290 ADH5P11766 374 aa8.9□□□□□ -0.98
CLIP1-206ENST00000535290 NCAM1P13591 858 aa8.9□□□□□ -0.98
CLIP1-206ENST00000535290 CD6P30203 668 aa8.9□□□□□ -0.98
CLIP1-206ENST00000535290 RPL10AP62906 217 aaKnown RBP8.9□□□□□ -0.98
CLIP1-206ENST00000535290 RHDQ02161 417 aa8.9□□□□□ -0.98
CLIP1-206ENST00000535290 KCNH2Q12809 1159 aa8.9□□□□□ -0.98
CLIP1-206ENST00000535290 TARDBPQ13148 414 aaKnown RBP eCLIP8.9□□□□□ -0.98
CLIP1-206ENST00000535290 MAPK7Q13164 816 aa8.9□□□□□ -0.98
CLIP1-206ENST00000535290 STK3Q13188 491 aa8.9□□□□□ -0.98
CLIP1-206ENST00000535290 RTP5Q14D33 572 aa8.9□□□□□ -0.98
CLIP1-206ENST00000535290 SUZ12Q15022 739 aaKnown RBP8.9□□□□□ -0.98
CLIP1-206ENST00000535290 ENOX2Q16206 610 aaKnown RBP8.9□□□□□ -0.98
CLIP1-206ENST00000535290 CCDC142Q17RM4 750 aa8.9□□□□□ -0.98
CLIP1-206ENST00000535290 KIF19Q2TAC6 998 aa8.9□□□□□ -0.98
CLIP1-206ENST00000535290 LY6G5CQ5SRR4 150 aa8.9□□□□□ -0.98
CLIP1-206ENST00000535290 C10orf76Q5T2E6 689 aa8.9□□□□□ -0.98
CLIP1-206ENST00000535290 EGFLAMQ63HQ2 1017 aa8.9□□□□□ -0.98
CLIP1-206ENST00000535290 JADE1Q6IE81 842 aa8.9□□□□□ -0.98
CLIP1-206ENST00000535290 TRMT11Q7Z4G4 463 aaKnown RBP8.9□□□□□ -0.98
CLIP1-206ENST00000535290 ETFBKMTQ8IXQ9 262 aa8.9□□□□□ -0.98
CLIP1-206ENST00000535290 C1orf216Q8TAB5 229 aa8.9□□□□□ -0.98
CLIP1-206ENST00000535290 TOE1Q96GM8 510 aaKnown RBP8.9□□□□□ -0.98
CLIP1-206ENST00000535290 TMEM176AQ96HP8 235 aa8.9□□□□□ -0.98
CLIP1-206ENST00000535290 GPR174Q9BXC1 333 aa8.9□□□□□ -0.98
CLIP1-206ENST00000535290 TRIM4Q9C037 500 aa8.9□□□□□ -0.98
CLIP1-206ENST00000535290 RNF38Q9H0F5 515 aa8.9□□□□□ -0.98
CLIP1-206ENST00000535290 OCEL1Q9H607 264 aa8.9□□□□□ -0.98
CLIP1-206ENST00000535290 IL17BQ9UHF5 180 aa8.9□□□□□ -0.98
CLIP1-206ENST00000535290 NFE2L3Q9Y4A8 694 aa8.9□□□□□ -0.98
CLIP1-206ENST00000535290 RBM19Q9Y4C8 960 aaKnown RBP8.9□□□□□ -0.98
CLIP1-206ENST00000535290 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.9□□□□□ -0.98
CLIP1-206ENST00000535290 RAD54BQ9Y620 910 aa8.9□□□□□ -0.98
CLIP1-206ENST00000535290 COL12A1Q99715 3063 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms