RNA–Protein interactions for RNA: ENST00000535094.6

MCF2L-232, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2L, Length 3,752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-232ENST00000535094 ROR2Q01974 943 aaKnown RBP16.57■□□□□ 0.24
MCF2L-232ENST00000535094 PRAMEF18Q5VWM3 479 aa16.57■□□□□ 0.24
MCF2L-232ENST00000535094 SPATA24Q86W54 205 aa16.57■□□□□ 0.24
MCF2L-232ENST00000535094 RAB3IL1Q8TBN0 382 aa16.57■□□□□ 0.24
MCF2L-232ENST00000535094 ATG4CQ96DT6 458 aa16.57■□□□□ 0.24
MCF2L-232ENST00000535094 MFSD14AQ96MC6 490 aa16.57■□□□□ 0.24
MCF2L-232ENST00000535094 SMYD2Q9NRG4 433 aa16.57■□□□□ 0.24
MCF2L-232ENST00000535094 ZNF277Q9NRM2 450 aaPredicted RBP16.57■□□□□ 0.24
MCF2L-232ENST00000535094 ZNF862O60290 1169 aa16.57■□□□□ 0.24
MCF2L-232ENST00000535094 DGKIO75912 1065 aa16.57■□□□□ 0.24
MCF2L-232ENST00000535094 DEUP1Q05D60 604 aa16.57■□□□□ 0.24
MCF2L-232ENST00000535094 VPS72Q15906 364 aa16.57■□□□□ 0.24
MCF2L-232ENST00000535094 C12orf56Q8IXR9 622 aa16.57■□□□□ 0.24
MCF2L-232ENST00000535094 FIS1Q9Y3D6 152 aa16.57■□□□□ 0.24
MCF2L-232ENST00000535094 PTPRJQ12913 1337 aa16.57■□□□□ 0.24
MCF2L-232ENST00000535094 A0A1B0GVG6 124 aa16.56■□□□□ 0.24
MCF2L-232ENST00000535094 TMEM191CA6NGB0 347 aa16.56■□□□□ 0.24
MCF2L-232ENST00000535094 NEMP1O14524 444 aa16.56■□□□□ 0.24
MCF2L-232ENST00000535094 TYROBPO43914 113 aa16.56■□□□□ 0.24
MCF2L-232ENST00000535094 PFDN1O60925 122 aa16.56■□□□□ 0.24
MCF2L-232ENST00000535094 PGM3O95394 542 aa16.56■□□□□ 0.24
MCF2L-232ENST00000535094 DESP17661 470 aa16.56■□□□□ 0.24
MCF2L-232ENST00000535094 CRADDP78560 199 aa16.56■□□□□ 0.24
MCF2L-232ENST00000535094 LPCAT4Q643R3 524 aa16.56■□□□□ 0.24
MCF2L-232ENST00000535094 DENND5BQ6ZUT9 1274 aa16.56■□□□□ 0.24
MCF2L-232ENST00000535094 CCDC60Q8IWA6 550 aaPredicted RBP16.56■□□□□ 0.24
MCF2L-232ENST00000535094 C7orf31Q8N865 590 aa16.56■□□□□ 0.24
MCF2L-232ENST00000535094 ATP2A3Q93084 1043 aa16.56■□□□□ 0.24
MCF2L-232ENST00000535094 APOPT1Q96IL0 206 aa16.56■□□□□ 0.24
MCF2L-232ENST00000535094 MMP19Q99542 508 aa16.56■□□□□ 0.24
MCF2L-232ENST00000535094 A6NHS1 94 aa16.56■□□□□ 0.24
MCF2L-232ENST00000535094 DHX15O43143 795 aaKnown RBP16.56■□□□□ 0.24
MCF2L-232ENST00000535094 LYPLA1O75608 230 aaPredicted RBP16.56■□□□□ 0.24
MCF2L-232ENST00000535094 PDGFRAP16234 1089 aa16.56■□□□□ 0.24
MCF2L-232ENST00000535094 LRRC71Q8N4P6 559 aa16.56■□□□□ 0.24
MCF2L-232ENST00000535094 RNF148Q8N7C7 305 aa16.56■□□□□ 0.24
MCF2L-232ENST00000535094 MIS12Q9H081 205 aa16.56■□□□□ 0.24
MCF2L-232ENST00000535094 SCN7AQ01118 1682 aa16.56■□□□□ 0.24
MCF2L-232ENST00000535094 UGT1A9O60656 530 aa16.56■□□□□ 0.24
MCF2L-232ENST00000535094 C6orf222P0C671 652 aaPredicted RBP16.56■□□□□ 0.24
MCF2L-232ENST00000535094 ANPEPP15144 967 aa16.56■□□□□ 0.24
MCF2L-232ENST00000535094 MSX2P35548 267 aaPredicted RBP16.56■□□□□ 0.24
MCF2L-232ENST00000535094 EML3Q32P44 896 aa16.56■□□□□ 0.24
MCF2L-232ENST00000535094 EFHC2Q5JST6 749 aa16.56■□□□□ 0.24
MCF2L-232ENST00000535094 SCARA3Q6AZY7 606 aa16.56■□□□□ 0.24
MCF2L-232ENST00000535094 PLEKHA7Q6IQ23 1121 aa16.56■□□□□ 0.24
MCF2L-232ENST00000535094 DENND1BQ6P3S1 775 aa16.56■□□□□ 0.24
MCF2L-232ENST00000535094 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.56■□□□□ 0.24
MCF2L-232ENST00000535094 TMPRSS6Q8IU80 811 aa16.56■□□□□ 0.24
MCF2L-232ENST00000535094 TTLL6Q8N841 843 aa16.56■□□□□ 0.24
MCF2L-232ENST00000535094 NRG4Q8WWG1 115 aa16.56■□□□□ 0.24
MCF2L-232ENST00000535094 UGT1A7Q9HAW7 530 aa16.56■□□□□ 0.24
MCF2L-232ENST00000535094 UGT1A10Q9HAW8 530 aa16.56■□□□□ 0.24
MCF2L-232ENST00000535094 UGT1A8Q9HAW9 530 aa16.56■□□□□ 0.24
MCF2L-232ENST00000535094 ACSS2Q9NR19 701 aa16.56■□□□□ 0.24
MCF2L-232ENST00000535094 POLIQ9UNA4 740 aa16.56■□□□□ 0.24
MCF2L-232ENST00000535094 DNAJC16Q9Y2G8 782 aa16.56■□□□□ 0.24
MCF2L-232ENST00000535094 COQ4Q9Y3A0 265 aa16.56■□□□□ 0.24
MCF2L-232ENST00000535094 GJA3Q9Y6H8 435 aa16.56■□□□□ 0.24
MCF2L-232ENST00000535094 NDC80O14777 642 aa16.55■□□□□ 0.24
MCF2L-232ENST00000535094 LIN7AO14910 233 aaPredicted RBP16.55■□□□□ 0.24
MCF2L-232ENST00000535094 GARTP22102 1010 aa16.55■□□□□ 0.24
MCF2L-232ENST00000535094 ACTR2P61160 394 aa16.55■□□□□ 0.24
MCF2L-232ENST00000535094 DPYSL3Q14195 570 aa16.55■□□□□ 0.24
MCF2L-232ENST00000535094 MAP7Q14244 749 aa16.55■□□□□ 0.24
MCF2L-232ENST00000535094 CWF19L1Q69YN2 538 aaKnown RBP16.55■□□□□ 0.24
MCF2L-232ENST00000535094 SLFN12LQ6IEE8 588 aa16.55■□□□□ 0.24
MCF2L-232ENST00000535094 IGDCC3Q8IVU1 814 aa16.55■□□□□ 0.24
MCF2L-232ENST00000535094 TRIM42Q8IWZ5 723 aa16.55■□□□□ 0.24
MCF2L-232ENST00000535094 CEP70Q8NHQ1 597 aa16.55■□□□□ 0.24
MCF2L-232ENST00000535094 ANKRD27Q96NW4 1050 aa16.55■□□□□ 0.24
MCF2L-232ENST00000535094 RPAP3Q9H6T3 665 aaPredicted RBP16.55■□□□□ 0.24
MCF2L-232ENST00000535094 CLIC5Q9NZA1 410 aa16.55■□□□□ 0.24
MCF2L-232ENST00000535094 FZD1Q9UP38 647 aa16.55■□□□□ 0.24
MCF2L-232ENST00000535094 SHANK3Q9BYB0 1731 aa16.55■□□□□ 0.24
MCF2L-232ENST00000535094 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.55■□□□□ 0.24
MCF2L-232ENST00000535094 H0YCG3 227 aa16.55■□□□□ 0.24
MCF2L-232ENST00000535094 TCN1P20061 433 aaPredicted RBP16.55■□□□□ 0.24
MCF2L-232ENST00000535094 OSBPP22059 807 aa16.55■□□□□ 0.24
MCF2L-232ENST00000535094 CDKN2BP42772 138 aa16.55■□□□□ 0.24
MCF2L-232ENST00000535094 MCL1Q07820 350 aa16.55■□□□□ 0.24
MCF2L-232ENST00000535094 CCNYQ8ND76 341 aa16.55■□□□□ 0.24
MCF2L-232ENST00000535094 B4GALNT2Q8NHY0 566 aa16.55■□□□□ 0.24
MCF2L-232ENST00000535094 CEP41Q9BYV8 373 aa16.55■□□□□ 0.24
MCF2L-232ENST00000535094 KLC2Q9H0B6 622 aa16.55■□□□□ 0.24
MCF2L-232ENST00000535094 TTLL3Q9Y4R7 772 aa16.55■□□□□ 0.24
MCF2L-232ENST00000535094 A0A0B4J269 797 aa16.55■□□□□ 0.24
MCF2L-232ENST00000535094 PROCP04070 461 aa16.55■□□□□ 0.24
MCF2L-232ENST00000535094 MMP8P22894 467 aa16.55■□□□□ 0.24
MCF2L-232ENST00000535094 DUOXA2Q1HG44 320 aa16.55■□□□□ 0.24
MCF2L-232ENST00000535094 OLFML2BQ68BL8 750 aa16.55■□□□□ 0.24
MCF2L-232ENST00000535094 CIAPIN1Q6FI81 312 aa16.55■□□□□ 0.24
MCF2L-232ENST00000535094 ULK2Q8IYT8 1036 aa16.55■□□□□ 0.24
MCF2L-232ENST00000535094 GALNT4Q8N4A0 578 aa16.55■□□□□ 0.24
MCF2L-232ENST00000535094 DLEC1Q9Y238 1755 aa16.55■□□□□ 0.24
MCF2L-232ENST00000535094 AIM2O14862 343 aa16.54■□□□□ 0.24
MCF2L-232ENST00000535094 CYP1A1P04798 512 aaPredicted RBP16.54■□□□□ 0.24
MCF2L-232ENST00000535094 ZNF667Q5HYK9 610 aa16.54■□□□□ 0.24
MCF2L-232ENST00000535094 TTC39BQ5VTQ0 682 aaPredicted RBP16.54■□□□□ 0.24
MCF2L-232ENST00000535094 SLC26A11Q86WA9 606 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms