RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 CERS4Q9HA82 394 aa12.97□□□□□ -0.33
SCARB1-204ENST00000535005 ENTPD7Q9NQZ7 604 aa12.97□□□□□ -0.33
SCARB1-204ENST00000535005 HSFX1Q9UBD0 423 aa12.97□□□□□ -0.33
SCARB1-204ENST00000535005 AFF4Q9UHB7 1163 aaKnown RBP12.97□□□□□ -0.33
SCARB1-204ENST00000535005 NENFQ9UMX5 172 aa12.97□□□□□ -0.33
SCARB1-204ENST00000535005 PCDHB5Q9Y5E4 795 aa12.97□□□□□ -0.33
SCARB1-204ENST00000535005 ATP8B3O60423 1300 aa12.97□□□□□ -0.33
SCARB1-204ENST00000535005 WDR27A2RRH5 827 aa12.97□□□□□ -0.33
SCARB1-204ENST00000535005 EBAG9O00559 213 aa12.97□□□□□ -0.33
SCARB1-204ENST00000535005 OPA1O60313 960 aa12.97□□□□□ -0.33
SCARB1-204ENST00000535005 LPXNO60711 386 aa12.97□□□□□ -0.33
SCARB1-204ENST00000535005 NDUFA10O95299 355 aa12.97□□□□□ -0.33
SCARB1-204ENST00000535005 SETSIPP0DME0 302 aa12.97□□□□□ -0.33
SCARB1-204ENST00000535005 GZMAP12544 262 aa12.97□□□□□ -0.33
SCARB1-204ENST00000535005 GPD2P43304 727 aa12.97□□□□□ -0.33
SCARB1-204ENST00000535005 MAGEA11P43364 429 aa12.97□□□□□ -0.33
SCARB1-204ENST00000535005 GOLGA7BQ2TAP0 167 aa12.97□□□□□ -0.33
SCARB1-204ENST00000535005 DENND1BQ6P3S1 775 aa12.97□□□□□ -0.33
SCARB1-204ENST00000535005 ZNF572Q7Z3I7 529 aaPredicted RBP12.97□□□□□ -0.33
SCARB1-204ENST00000535005 FAM35AQ86V20 835 aa12.97□□□□□ -0.33
SCARB1-204ENST00000535005 TTC30AQ86WT1 665 aa12.97□□□□□ -0.33
SCARB1-204ENST00000535005 SPATA2LQ8IUW3 424 aaPredicted RBP12.97□□□□□ -0.33
SCARB1-204ENST00000535005 TMEM35BQ8NCS4 154 aa12.97□□□□□ -0.33
SCARB1-204ENST00000535005 DUSP16Q9BY84 665 aa12.97□□□□□ -0.33
SCARB1-204ENST00000535005 ZNF576Q9H609 170 aa12.97□□□□□ -0.33
SCARB1-204ENST00000535005 CSNK1G1Q9HCP0 422 aa12.97□□□□□ -0.33
SCARB1-204ENST00000535005 HESX1Q9UBX0 185 aa12.97□□□□□ -0.33
SCARB1-204ENST00000535005 ADAMTS1Q9UHI8 967 aa12.97□□□□□ -0.33
SCARB1-204ENST00000535005 EPN1Q9Y6I3 576 aaPredicted RBP12.97□□□□□ -0.33
SCARB1-204ENST00000535005 TRANK1O15050 2925 aa12.96□□□□□ -0.33
SCARB1-204ENST00000535005 A0A087X0T9 212 aa12.96□□□□□ -0.33
SCARB1-204ENST00000535005 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.96□□□□□ -0.33
SCARB1-204ENST00000535005 MTMR11A4FU01 709 aa12.96□□□□□ -0.33
SCARB1-204ENST00000535005 EPOPA6NHQ4 379 aa12.96□□□□□ -0.33
SCARB1-204ENST00000535005 LCA5LO95447 670 aa12.96□□□□□ -0.33
SCARB1-204ENST00000535005 VNN2O95498 520 aa12.96□□□□□ -0.33
SCARB1-204ENST00000535005 ADH1AP07327 375 aa12.96□□□□□ -0.33
SCARB1-204ENST00000535005 FAM228BP0C875 321 aa12.96□□□□□ -0.33
SCARB1-204ENST00000535005 UNGP13051 313 aaPredicted RBP12.96□□□□□ -0.33
SCARB1-204ENST00000535005 ATF2P15336 505 aa12.96□□□□□ -0.33
SCARB1-204ENST00000535005 ADORA2BP29275 332 aa12.96□□□□□ -0.33
SCARB1-204ENST00000535005 IRS1P35568 1242 aa12.96□□□□□ -0.33
SCARB1-204ENST00000535005 CYLC1P35663 651 aaPredicted RBP12.96□□□□□ -0.33
SCARB1-204ENST00000535005 KIF11P52732 1056 aa12.96□□□□□ -0.33
SCARB1-204ENST00000535005 BCAT1P54687 386 aa12.96□□□□□ -0.33
SCARB1-204ENST00000535005 ARPP19P56211 112 aa12.96□□□□□ -0.33
SCARB1-204ENST00000535005 CYP27A1Q02318 531 aa12.96□□□□□ -0.33
SCARB1-204ENST00000535005 SLC18A3Q16572 532 aa12.96□□□□□ -0.33
SCARB1-204ENST00000535005 CLEC16AQ2KHT3 1053 aa12.96□□□□□ -0.33
SCARB1-204ENST00000535005 PLPP4Q5VZY2 271 aa12.96□□□□□ -0.33
SCARB1-204ENST00000535005 PPP1R2P3Q6NXS1 205 aa12.96□□□□□ -0.33
SCARB1-204ENST00000535005 LILRA6Q6PI73 481 aa12.96□□□□□ -0.33
SCARB1-204ENST00000535005 FOXR1Q6PIV2 292 aa12.96□□□□□ -0.33
SCARB1-204ENST00000535005 VSTM1Q6UX27 236 aa12.96□□□□□ -0.33
SCARB1-204ENST00000535005 RNF19BQ6ZMZ0 732 aa12.96□□□□□ -0.33
SCARB1-204ENST00000535005 WDTC1Q8N5D0 677 aa12.96□□□□□ -0.33
SCARB1-204ENST00000535005 ACRBPQ8NEB7 543 aa12.96□□□□□ -0.33
SCARB1-204ENST00000535005 MICAL1Q8TDZ2 1067 aa12.96□□□□□ -0.33
SCARB1-204ENST00000535005 STK32AQ8WU08 396 aa12.96□□□□□ -0.33
SCARB1-204ENST00000535005 SMARCD1Q96GM5 515 aa12.96□□□□□ -0.33
SCARB1-204ENST00000535005 MED10Q9BTT4 135 aa12.96□□□□□ -0.33
SCARB1-204ENST00000535005 TSGA10Q9BZW7 698 aa12.96□□□□□ -0.33
SCARB1-204ENST00000535005 LAMA3Q16787 3333 aa12.96□□□□□ -0.34
SCARB1-204ENST00000535005 HIDE1A8MVS5 230 aa12.95□□□□□ -0.34
SCARB1-204ENST00000535005 M0QYV0 167 aa12.95□□□□□ -0.34
SCARB1-204ENST00000535005 CLDN5O00501 218 aa12.95□□□□□ -0.34
SCARB1-204ENST00000535005 KRT86O43790 486 aa12.95□□□□□ -0.34
SCARB1-204ENST00000535005 AKR1B10O60218 316 aa12.95□□□□□ -0.34
SCARB1-204ENST00000535005 FAM200BP0CF97 657 aa12.95□□□□□ -0.34
SCARB1-204ENST00000535005 NPR3P17342 541 aa12.95□□□□□ -0.34
SCARB1-204ENST00000535005 NOMO3P69849 1222 aa12.95□□□□□ -0.34
SCARB1-204ENST00000535005 BST2Q10589 180 aaKnown RBP12.95□□□□□ -0.34
SCARB1-204ENST00000535005 B4GALNT4Q76KP1 1039 aa12.95□□□□□ -0.34
SCARB1-204ENST00000535005 PALB2Q86YC2 1186 aa12.95□□□□□ -0.34
SCARB1-204ENST00000535005 SLC35F5Q8WV83 523 aa12.95□□□□□ -0.34
SCARB1-204ENST00000535005 MRPL38Q96DV4 380 aaKnown RBP12.95□□□□□ -0.34
SCARB1-204ENST00000535005 NAGPAQ9UK23 515 aa12.95□□□□□ -0.34
SCARB1-204ENST00000535005 CEP83Q9Y592 693 aa12.95□□□□□ -0.34
SCARB1-204ENST00000535005 GOLGA6CA6NDK9 693 aa12.95□□□□□ -0.34
SCARB1-204ENST00000535005 SRRM3A6NNA2 597 aaPredicted RBP12.95□□□□□ -0.34
SCARB1-204ENST00000535005 AP1G2O75843 785 aa12.95□□□□□ -0.34
SCARB1-204ENST00000535005 GOLGA6DP0CG33 693 aa12.95□□□□□ -0.34
SCARB1-204ENST00000535005 HAPLN1P10915 354 aaPredicted RBP12.95□□□□□ -0.34
SCARB1-204ENST00000535005 BDNFP23560 247 aa12.95□□□□□ -0.34
SCARB1-204ENST00000535005 TNFRSF8P28908 595 aa12.95□□□□□ -0.34
SCARB1-204ENST00000535005 RPL34P49207 117 aaKnown RBP12.95□□□□□ -0.34
SCARB1-204ENST00000535005 SLC8A3P57103 927 aa12.95□□□□□ -0.34
SCARB1-204ENST00000535005 CENPCQ03188 943 aa12.95□□□□□ -0.34
SCARB1-204ENST00000535005 PTPROQ16827 1216 aa12.95□□□□□ -0.34
SCARB1-204ENST00000535005 ALS2CLQ60I27 953 aa12.95□□□□□ -0.34
SCARB1-204ENST00000535005 ACAD10Q6JQN1 1059 aa12.95□□□□□ -0.34
SCARB1-204ENST00000535005 CCNI2Q6ZMN8 369 aaPredicted RBP12.95□□□□□ -0.34
SCARB1-204ENST00000535005 CLEC20AQ6ZU45 233 aa12.95□□□□□ -0.34
SCARB1-204ENST00000535005 TCEAL8Q8IYN2 117 aa12.95□□□□□ -0.34
SCARB1-204ENST00000535005 MMGT1Q8N4V1 131 aa12.95□□□□□ -0.34
SCARB1-204ENST00000535005 ATAD1Q8NBU5 361 aa12.95□□□□□ -0.34
SCARB1-204ENST00000535005 UBA3Q8TBC4 463 aa12.95□□□□□ -0.34
SCARB1-204ENST00000535005 GDPD5Q8WTR4 605 aa12.95□□□□□ -0.34
SCARB1-204ENST00000535005 C8orf48Q96LL4 319 aa12.95□□□□□ -0.34
SCARB1-204ENST00000535005 CEP295NLQ96MC4 621 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms