RNA–Protein interactions for RNA: ENST00000534699.5

CSDE1-217, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CSDE1, Length 2,667 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-217ENST00000534699 PHOX2BQ99453 314 aa11.03□□□□□ -0.64
CSDE1-217ENST00000534699 HPS4Q9NQG7 708 aa11.03□□□□□ -0.64
CSDE1-217ENST00000534699 GMEB2Q9UKD1 530 aa11.03□□□□□ -0.64
CSDE1-217ENST00000534699 SOAT2O75908 522 aa11.03□□□□□ -0.64
CSDE1-217ENST00000534699 HLA-DRAP01903 254 aa11.03□□□□□ -0.64
CSDE1-217ENST00000534699 EML3Q32P44 896 aa11.03□□□□□ -0.64
CSDE1-217ENST00000534699 TMEM130Q8N3G9 435 aa11.03□□□□□ -0.64
CSDE1-217ENST00000534699 ENGASEQ8NFI3 743 aa11.03□□□□□ -0.64
CSDE1-217ENST00000534699 PLEKHO2Q8TD55 490 aa11.03□□□□□ -0.64
CSDE1-217ENST00000534699 NT5C1AQ9BXI3 368 aa11.03□□□□□ -0.64
CSDE1-217ENST00000534699 ECT2Q9H8V3 914 aa11.03□□□□□ -0.64
CSDE1-217ENST00000534699 TLR8Q9NR97 1041 aaKnown RBP11.03□□□□□ -0.64
CSDE1-217ENST00000534699 MAGED2Q9UNF1 606 aaPredicted RBP11.03□□□□□ -0.64
CSDE1-217ENST00000534699 TNFRSF10BO14763 440 aa11.02□□□□□ -0.64
CSDE1-217ENST00000534699 FGFR1OPO95684 399 aaKnown RBP11.02□□□□□ -0.64
CSDE1-217ENST00000534699 GNA14O95837 355 aa11.02□□□□□ -0.64
CSDE1-217ENST00000534699 CKMP06732 381 aa11.02□□□□□ -0.64
CSDE1-217ENST00000534699 TNFRSF4P43489 277 aa11.02□□□□□ -0.64
CSDE1-217ENST00000534699 LMNB2Q03252 620 aa11.02□□□□□ -0.64
CSDE1-217ENST00000534699 HECTD3Q5T447 861 aa11.02□□□□□ -0.64
CSDE1-217ENST00000534699 STXBP5Q5T5C0 1151 aa11.02□□□□□ -0.64
CSDE1-217ENST00000534699 LMBRD2Q68DH5 695 aaPredicted RBP11.02□□□□□ -0.64
CSDE1-217ENST00000534699 ARHGAP17Q68EM7 881 aa11.02□□□□□ -0.64
CSDE1-217ENST00000534699 TRIML1Q8N9V2 468 aa11.02□□□□□ -0.64
CSDE1-217ENST00000534699 P2RY13Q9BPV8 354 aa11.02□□□□□ -0.64
CSDE1-217ENST00000534699 TMEM51Q9NW97 253 aa11.02□□□□□ -0.64
CSDE1-217ENST00000534699 EBF1Q9UH73 591 aa11.02□□□□□ -0.64
CSDE1-217ENST00000534699 NDRG2Q9UN36 371 aaKnown RBP11.02□□□□□ -0.64
CSDE1-217ENST00000534699 SCML2Q9UQR0 700 aa11.02□□□□□ -0.64
CSDE1-217ENST00000534699 BICDL2A1A5D9 508 aa11.02□□□□□ -0.65
CSDE1-217ENST00000534699 NRG2O14511 850 aaPredicted RBP11.02□□□□□ -0.65
CSDE1-217ENST00000534699 ADH1CP00326 375 aa11.02□□□□□ -0.65
CSDE1-217ENST00000534699 RETP07949 1114 aa11.02□□□□□ -0.65
CSDE1-217ENST00000534699 TBXAS1P24557 533 aaPredicted RBP11.02□□□□□ -0.65
CSDE1-217ENST00000534699 BYSLQ13895 437 aaKnown RBP11.02□□□□□ -0.65
CSDE1-217ENST00000534699 STILQ15468 1287 aa11.02□□□□□ -0.65
CSDE1-217ENST00000534699 WDR44Q5JSH3 913 aa11.02□□□□□ -0.65
CSDE1-217ENST00000534699 C1orf220Q5T0J3 134 aa11.02□□□□□ -0.65
CSDE1-217ENST00000534699 CEP135Q66GS9 1140 aa11.02□□□□□ -0.65
CSDE1-217ENST00000534699 TXNDC8Q6A555 127 aa11.02□□□□□ -0.65
CSDE1-217ENST00000534699 TRMT11Q7Z4G4 463 aaKnown RBP11.02□□□□□ -0.65
CSDE1-217ENST00000534699 FILIP1Q7Z7B0 1213 aa11.02□□□□□ -0.65
CSDE1-217ENST00000534699 SMARCE1Q969G3 411 aa11.02□□□□□ -0.65
CSDE1-217ENST00000534699 JAKMIP2Q96AA8 810 aa11.02□□□□□ -0.65
CSDE1-217ENST00000534699 LRRC3BQ96PB8 259 aa11.02□□□□□ -0.65
CSDE1-217ENST00000534699 NXF1Q9UBU9 619 aaKnown RBP11.02□□□□□ -0.65
CSDE1-217ENST00000534699 PCDHGA5Q9Y5G8 931 aa11.02□□□□□ -0.65
CSDE1-217ENST00000534699 PLXND1Q9Y4D7 1925 aa11.02□□□□□ -0.65
CSDE1-217ENST00000534699 MYO16Q9Y6X6 1858 aa11.02□□□□□ -0.65
CSDE1-217ENST00000534699 PDGFRBP09619 1106 aa11.02□□□□□ -0.65
CSDE1-217ENST00000534699 ASPAP45381 313 aa11.02□□□□□ -0.65
CSDE1-217ENST00000534699 MEA1Q16626 185 aa11.02□□□□□ -0.65
CSDE1-217ENST00000534699 SYT13Q7L8C5 426 aa11.02□□□□□ -0.65
CSDE1-217ENST00000534699 GRAMD1CQ8IYS0 662 aa11.02□□□□□ -0.65
CSDE1-217ENST00000534699 FBXL13Q8NEE6 735 aa11.02□□□□□ -0.65
CSDE1-217ENST00000534699 SH3RF2Q8TEC5 729 aa11.02□□□□□ -0.65
CSDE1-217ENST00000534699 MED10Q9BTT4 135 aa11.02□□□□□ -0.65
CSDE1-217ENST00000534699 CLIC5Q9NZA1 410 aa11.02□□□□□ -0.65
CSDE1-217ENST00000534699 COL4A3Q01955 1670 aa11.01□□□□□ -0.65
CSDE1-217ENST00000534699 F8VP50 259 aa11.01□□□□□ -0.65
CSDE1-217ENST00000534699 K7ESF4 209 aa11.01□□□□□ -0.65
CSDE1-217ENST00000534699 PSMA7O14818 248 aa11.01□□□□□ -0.65
CSDE1-217ENST00000534699 NPC1O15118 1278 aa11.01□□□□□ -0.65
CSDE1-217ENST00000534699 ATP2C2O75185 946 aa11.01□□□□□ -0.65
CSDE1-217ENST00000534699 FAM200BP0CF97 657 aa11.01□□□□□ -0.65
CSDE1-217ENST00000534699 GPR15P49685 360 aa11.01□□□□□ -0.65
CSDE1-217ENST00000534699 PSMC1P62191 440 aaKnown RBP11.01□□□□□ -0.65
CSDE1-217ENST00000534699 FBXO32Q969P5 355 aa11.01□□□□□ -0.65
CSDE1-217ENST00000534699 DCLK3Q9C098 648 aa11.01□□□□□ -0.65
CSDE1-217ENST00000534699 CYLDQ9NQC7 956 aa11.01□□□□□ -0.65
CSDE1-217ENST00000534699 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.01□□□□□ -0.651e-6■■■■■ 139.3
CSDE1-217ENST00000534699 SMG5Q9UPR3 1016 aaKnown RBP11.01□□□□□ -0.65
CSDE1-217ENST00000534699 SLC8A2Q9UPR5 921 aa11.01□□□□□ -0.65
CSDE1-217ENST00000534699 LEFTY2O00292 366 aa11.01□□□□□ -0.65
CSDE1-217ENST00000534699 HOXC11O43248 304 aaPredicted RBP11.01□□□□□ -0.65
CSDE1-217ENST00000534699 CILPO75339 1184 aa11.01□□□□□ -0.65
CSDE1-217ENST00000534699 CASP1P29466 404 aa11.01□□□□□ -0.65
CSDE1-217ENST00000534699 GJA4P35212 333 aa11.01□□□□□ -0.65
CSDE1-217ENST00000534699 SLC8A3P57103 927 aa11.01□□□□□ -0.65
CSDE1-217ENST00000534699 ZNF445P59923 1031 aa11.01□□□□□ -0.65
CSDE1-217ENST00000534699 GAD2Q05329 585 aa11.01□□□□□ -0.65
CSDE1-217ENST00000534699 CETN1Q12798 172 aa11.01□□□□□ -0.65
CSDE1-217ENST00000534699 PUM1Q14671 1186 aaKnown RBP eCLIP11.01□□□□□ -0.657e-7■■□□□ 11.5
CSDE1-217ENST00000534699 FSTL4Q6MZW2 842 aa11.01□□□□□ -0.65
CSDE1-217ENST00000534699 CCDC186Q7Z3E2 898 aa11.01□□□□□ -0.65
CSDE1-217ENST00000534699 ZC3H10Q96K80 434 aaKnown RBP11.01□□□□□ -0.65
CSDE1-217ENST00000534699 GOLPH3LQ9H4A5 285 aa11.01□□□□□ -0.65
CSDE1-217ENST00000534699 SMYD3Q9H7B4 428 aa11.01□□□□□ -0.65
CSDE1-217ENST00000534699 MARK1Q9P0L2 795 aa11.01□□□□□ -0.65
CSDE1-217ENST00000534699 NCDNQ9UBB6 729 aa11.01□□□□□ -0.65
CSDE1-217ENST00000534699 ZDBF2Q9HCK1 2354 aa11□□□□□ -0.65
CSDE1-217ENST00000534699 AP1G2O75843 785 aa11□□□□□ -0.65
CSDE1-217ENST00000534699 PRR29P0C7W0 189 aa11□□□□□ -0.65
CSDE1-217ENST00000534699 CASP4P49662 377 aa11□□□□□ -0.65
CSDE1-217ENST00000534699 MXI1P50539 228 aa11□□□□□ -0.65
CSDE1-217ENST00000534699 NDST1P52848 882 aa11□□□□□ -0.65
CSDE1-217ENST00000534699 TAF10Q12962 218 aa11□□□□□ -0.65
CSDE1-217ENST00000534699 PON2Q15165 354 aa11□□□□□ -0.65
CSDE1-217ENST00000534699 PAQR9Q6ZVX9 377 aa11□□□□□ -0.65
CSDE1-217ENST00000534699 HTR3DQ70Z44 454 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms