RNA–Protein interactions for RNA: ENST00000533909.5

CAPN1-227, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-227ENST00000533909 CRACR2AQ9BSW2 395 aa14.15□□□□□ -0.14
CAPN1-227ENST00000533909 DUSP16Q9BY84 665 aa14.15□□□□□ -0.14
CAPN1-227ENST00000533909 NAT10Q9H0A0 1025 aaKnown RBP14.15□□□□□ -0.14
CAPN1-227ENST00000533909 HEBP1Q9NRV9 189 aa14.15□□□□□ -0.14
CAPN1-227ENST00000533909 KIAA1257Q9ULG3 409 aa14.15□□□□□ -0.14
CAPN1-227ENST00000533909 MRPS17Q9Y2R5 130 aaKnown RBP14.15□□□□□ -0.14
CAPN1-227ENST00000533909 NFE2L3Q9Y4A8 694 aa14.15□□□□□ -0.14
CAPN1-227ENST00000533909 MUC6Q6W4X9 2439 aa14.15□□□□□ -0.14
CAPN1-227ENST00000533909 MYH10P35580 1976 aa14.14□□□□□ -0.15
CAPN1-227ENST00000533909 C2orf78A6NCI8 922 aa14.14□□□□□ -0.15
CAPN1-227ENST00000533909 ZNF840PA6NDX5 716 aa14.14□□□□□ -0.15
CAPN1-227ENST00000533909 KCNJ18B7U540 433 aa14.14□□□□□ -0.15
CAPN1-227ENST00000533909 MAN2B1O00754 1011 aa14.14□□□□□ -0.15
CAPN1-227ENST00000533909 CHADO15335 359 aa14.14□□□□□ -0.15
CAPN1-227ENST00000533909 VDRP11473 427 aa14.14□□□□□ -0.15
CAPN1-227ENST00000533909 KRT5P13647 590 aa14.14□□□□□ -0.15
CAPN1-227ENST00000533909 PFKLP17858 780 aa14.14□□□□□ -0.15
CAPN1-227ENST00000533909 ACO1P21399 889 aaKnown RBP14.14□□□□□ -0.15
CAPN1-227ENST00000533909 EEF1GP26641 437 aaKnown RBP14.14□□□□□ -0.15
CAPN1-227ENST00000533909 AVPR2P30518 371 aa14.14□□□□□ -0.15
CAPN1-227ENST00000533909 CLCN5P51795 746 aa14.14□□□□□ -0.15
CAPN1-227ENST00000533909 MFAP3P55082 362 aa14.14□□□□□ -0.15
CAPN1-227ENST00000533909 FCHO2Q0JRZ9 810 aa14.14□□□□□ -0.15
CAPN1-227ENST00000533909 KCNJ12Q14500 433 aa14.14□□□□□ -0.15
CAPN1-227ENST00000533909 ZNF268Q14587 947 aaPredicted RBP14.14□□□□□ -0.15
CAPN1-227ENST00000533909 UBXN2BQ14CS0 331 aa14.14□□□□□ -0.15
CAPN1-227ENST00000533909 EXOC3L4Q17RC7 722 aa14.14□□□□□ -0.15
CAPN1-227ENST00000533909 GOLGA7BQ2TAP0 167 aa14.14□□□□□ -0.15
CAPN1-227ENST00000533909 ARHGAP17Q68EM7 881 aa14.14□□□□□ -0.15
CAPN1-227ENST00000533909 ZNF852Q6ZMS4 543 aa14.14□□□□□ -0.15
CAPN1-227ENST00000533909 RBM43Q6ZSC3 357 aaKnown RBP14.14□□□□□ -0.15
CAPN1-227ENST00000533909 IRF2BP1Q8IU81 584 aa14.14□□□□□ -0.15
CAPN1-227ENST00000533909 TUBGCP2Q9BSJ2 902 aa14.14□□□□□ -0.15
CAPN1-227ENST00000533909 CSNK1G1Q9HCP0 422 aa14.14□□□□□ -0.15
CAPN1-227ENST00000533909 UBE2TQ9NPD8 197 aaPredicted RBP14.14□□□□□ -0.15
CAPN1-227ENST00000533909 CHORDC1Q9UHD1 332 aaPredicted RBP14.14□□□□□ -0.15
CAPN1-227ENST00000533909 CCL26Q9Y258 94 aa14.14□□□□□ -0.15
CAPN1-227ENST00000533909 PIAS3Q9Y6X2 628 aa14.14□□□□□ -0.15
CAPN1-227ENST00000533909 NUP210Q8TEM1 1887 aaPredicted RBP14.13□□□□□ -0.15
CAPN1-227ENST00000533909 TNFRSF10BO14763 440 aa14.13□□□□□ -0.15
CAPN1-227ENST00000533909 BEST1O76090 585 aa14.13□□□□□ -0.15
CAPN1-227ENST00000533909 PAEPP09466 180 aa14.13□□□□□ -0.15
CAPN1-227ENST00000533909 AOC1P19801 751 aa14.13□□□□□ -0.15
CAPN1-227ENST00000533909 USP8P40818 1118 aa14.13□□□□□ -0.15
CAPN1-227ENST00000533909 VCPP55072 806 aaKnown RBP14.13□□□□□ -0.15
CAPN1-227ENST00000533909 VWA3BQ502W6 1294 aa14.13□□□□□ -0.15
CAPN1-227ENST00000533909 HECTD3Q5T447 861 aa14.13□□□□□ -0.15
CAPN1-227ENST00000533909 PHLDB3Q6NSJ2 640 aa14.13□□□□□ -0.15
CAPN1-227ENST00000533909 CAVIN1Q6NZI2 390 aaKnown RBP14.13□□□□□ -0.15
CAPN1-227ENST00000533909 ENOSF1Q7L5Y1 443 aa14.13□□□□□ -0.15
CAPN1-227ENST00000533909 ARHGEF19Q8IW93 802 aa14.13□□□□□ -0.15
CAPN1-227ENST00000533909 ANKRD52Q8NB46 1076 aa14.13□□□□□ -0.15
CAPN1-227ENST00000533909 RBBP8NLQ8NC74 664 aaPredicted RBP14.13□□□□□ -0.15
CAPN1-227ENST00000533909 LMO3Q8TAP4 145 aa14.13□□□□□ -0.15
CAPN1-227ENST00000533909 ENOX1Q8TC92 643 aaKnown RBP14.13□□□□□ -0.15
CAPN1-227ENST00000533909 KAT5Q92993 513 aa14.13□□□□□ -0.15
CAPN1-227ENST00000533909 ZFYVE19Q96K21 471 aa14.13□□□□□ -0.15
CAPN1-227ENST00000533909 PRRX2Q99811 253 aa14.13□□□□□ -0.15
CAPN1-227ENST00000533909 NDST4Q9H3R1 872 aa14.13□□□□□ -0.15
CAPN1-227ENST00000533909 PNPLA8Q9NP80 782 aa14.13□□□□□ -0.15
CAPN1-227ENST00000533909 TLR8Q9NR97 1041 aaKnown RBP14.13□□□□□ -0.15
CAPN1-227ENST00000533909 SAMSN1Q9NSI8 373 aaKnown RBP14.13□□□□□ -0.15
CAPN1-227ENST00000533909 GMIPQ9P107 970 aa14.13□□□□□ -0.15
CAPN1-227ENST00000533909 SIT1Q9Y3P8 196 aa14.13□□□□□ -0.15
CAPN1-227ENST00000533909 ZNF638Q14966 1978 aaKnown RBP14.13□□□□□ -0.15
CAPN1-227ENST00000533909 KANSL1LA0AUZ9 987 aa14.12□□□□□ -0.15
CAPN1-227ENST00000533909 GTPBP10A4D1E9 387 aaKnown RBP14.12□□□□□ -0.15
CAPN1-227ENST00000533909 MBL2P11226 248 aaPredicted RBP14.12□□□□□ -0.15
CAPN1-227ENST00000533909 IFNAR2P48551 515 aa14.12□□□□□ -0.15
CAPN1-227ENST00000533909 BCAT1P54687 386 aa14.12□□□□□ -0.15
CAPN1-227ENST00000533909 STARD6P59095 220 aa14.12□□□□□ -0.15
CAPN1-227ENST00000533909 MYL5Q02045 173 aa14.12□□□□□ -0.15
CAPN1-227ENST00000533909 MTF1Q14872 753 aa14.12□□□□□ -0.15
CAPN1-227ENST00000533909 PDGFRLQ15198 375 aa14.12□□□□□ -0.15
CAPN1-227ENST00000533909 TCP11X2Q5H9J9 407 aa14.12□□□□□ -0.15
CAPN1-227ENST00000533909 C1orf228Q6PIY5 440 aa14.12□□□□□ -0.15
CAPN1-227ENST00000533909 TRIM65Q6PJ69 517 aa14.12□□□□□ -0.15
CAPN1-227ENST00000533909 DDX42Q86XP3 938 aaKnown RBP eCLIP14.12□□□□□ -0.15
CAPN1-227ENST00000533909 ZMIZ2Q8NF64 920 aa14.12□□□□□ -0.15
CAPN1-227ENST00000533909 TTC8Q8TAM2 541 aa14.12□□□□□ -0.15
CAPN1-227ENST00000533909 SH3RF2Q8TEC5 729 aa14.12□□□□□ -0.15
CAPN1-227ENST00000533909 SLC22A12Q96S37 553 aa14.12□□□□□ -0.15
CAPN1-227ENST00000533909 NELL2Q99435 816 aa14.12□□□□□ -0.15
CAPN1-227ENST00000533909 FOXQ1Q9C009 403 aa14.12□□□□□ -0.15
CAPN1-227ENST00000533909 LRRC4Q9HBW1 653 aa14.12□□□□□ -0.15
CAPN1-227ENST00000533909 TRPV5Q9NQA5 729 aa14.12□□□□□ -0.15
CAPN1-227ENST00000533909 GKN1Q9NS71 199 aa14.12□□□□□ -0.15
CAPN1-227ENST00000533909 SMPD4Q9NXE4 827 aa14.12□□□□□ -0.15
CAPN1-227ENST00000533909 APEX2Q9UBZ4 518 aa14.12□□□□□ -0.15
CAPN1-227ENST00000533909 TSPAN16Q9UKR8 245 aa14.12□□□□□ -0.15
CAPN1-227ENST00000533909 ARHGAP26Q9UNA1 814 aa14.12□□□□□ -0.15
CAPN1-227ENST00000533909 SCML2Q9UQR0 700 aa14.12□□□□□ -0.15
CAPN1-227ENST00000533909 NCANO14594 1321 aa14.12□□□□□ -0.15
CAPN1-227ENST00000533909 FAM170BA6NMN3 283 aa14.11□□□□□ -0.15
CAPN1-227ENST00000533909 NCAM2O15394 837 aa14.11□□□□□ -0.15
CAPN1-227ENST00000533909 CYP26A1O43174 497 aa14.11□□□□□ -0.15
CAPN1-227ENST00000533909 SETSIPP0DME0 302 aa14.11□□□□□ -0.15
CAPN1-227ENST00000533909 GLULP15104 373 aa14.11□□□□□ -0.15
CAPN1-227ENST00000533909 SLC9A1P19634 815 aa14.11□□□□□ -0.15
CAPN1-227ENST00000533909 CDK11BP21127 795 aaKnown RBP14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms