RNA–Protein interactions for RNA: ENST00000533728.1

CHKA-207, Transcript of choline kinase alpha, humanhuman

TSL 2

Gene CHKA, Length 662 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-207ENST00000533728 IQCF3P0C7M6 154 aa10.16□□□□□ -0.78
CHKA-207ENST00000533728 CYBAP13498 195 aa10.16□□□□□ -0.78
CHKA-207ENST00000533728 ATF2P15336 505 aa10.16□□□□□ -0.78
CHKA-207ENST00000533728 KCNA5P22460 613 aa10.16□□□□□ -0.78
CHKA-207ENST00000533728 ATP5DP30049 168 aa10.16□□□□□ -0.78
CHKA-207ENST00000533728 LSP1P33241 339 aa10.16□□□□□ -0.78
CHKA-207ENST00000533728 ADCYAP1R1P41586 468 aa10.16□□□□□ -0.78
CHKA-207ENST00000533728 SNX16P57768 344 aa10.16□□□□□ -0.78
CHKA-207ENST00000533728 NKX3-2P78367 333 aa10.16□□□□□ -0.78
CHKA-207ENST00000533728 ZNF252P-AS1Q0IIN9 211 aa10.16□□□□□ -0.78
CHKA-207ENST00000533728 PPIGQ13427 754 aaKnown RBP eCLIP10.16□□□□□ -0.78
CHKA-207ENST00000533728 ACVR2BQ13705 512 aa10.16□□□□□ -0.78
CHKA-207ENST00000533728 CCL14Q16627 93 aa10.16□□□□□ -0.78
CHKA-207ENST00000533728 HADHQ16836 314 aaKnown RBP10.16□□□□□ -0.78
CHKA-207ENST00000533728 DNAJC21Q5F1R6 531 aaKnown RBP10.16□□□□□ -0.78
CHKA-207ENST00000533728 JADE1Q6IE81 842 aa10.16□□□□□ -0.78
CHKA-207ENST00000533728 SPOCD1Q6ZMY3 1216 aa10.16□□□□□ -0.78
CHKA-207ENST00000533728 C16orf59Q7L2K0 433 aa10.16□□□□□ -0.78
CHKA-207ENST00000533728 VSIG1Q86XK7 387 aa10.16□□□□□ -0.78
CHKA-207ENST00000533728 CCDC50Q8IVM0 306 aa10.16□□□□□ -0.78
CHKA-207ENST00000533728 KIAA0319LQ8IZA0 1049 aa10.16□□□□□ -0.78
CHKA-207ENST00000533728 CEP120Q8N960 986 aa10.16□□□□□ -0.78
CHKA-207ENST00000533728 SLC4A11Q8NBS3 891 aa10.16□□□□□ -0.78
CHKA-207ENST00000533728 OR6J1Q8NGC5 347 aa10.16□□□□□ -0.78
CHKA-207ENST00000533728 C1orf54Q8WWF1 131 aa10.16□□□□□ -0.78
CHKA-207ENST00000533728 TFAP2BQ92481 460 aa10.16□□□□□ -0.78
CHKA-207ENST00000533728 EDAQ92838 391 aa10.16□□□□□ -0.78
CHKA-207ENST00000533728 ELMO3Q96BJ8 720 aa10.16□□□□□ -0.78
CHKA-207ENST00000533728 MCRS1Q96EZ8 462 aa10.16□□□□□ -0.78
CHKA-207ENST00000533728 TMEM176AQ96HP8 235 aa10.16□□□□□ -0.78
CHKA-207ENST00000533728 SCLT1Q96NL6 688 aa10.16□□□□□ -0.78
CHKA-207ENST00000533728 SERPINB12Q96P63 405 aa10.16□□□□□ -0.78
CHKA-207ENST00000533728 PPCSQ9HAB8 311 aa10.16□□□□□ -0.78
CHKA-207ENST00000533728 CHST7Q9NS84 486 aa10.16□□□□□ -0.78
CHKA-207ENST00000533728 ASIC3Q9UHC3 531 aa10.16□□□□□ -0.78
CHKA-207ENST00000533728 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.16□□□□□ -0.78
CHKA-207ENST00000533728 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.16□□□□□ -0.78
CHKA-207ENST00000533728 NRCAMQ92823 1304 aa10.15□□□□□ -0.78
CHKA-207ENST00000533728 TEP1Q99973 2627 aaKnown RBP10.15□□□□□ -0.78
CHKA-207ENST00000533728 MBLAC1A4D2B0 266 aaPredicted RBP10.15□□□□□ -0.78
CHKA-207ENST00000533728 EBAG9O00559 213 aa10.15□□□□□ -0.78
CHKA-207ENST00000533728 TP73O15350 636 aa10.15□□□□□ -0.78
CHKA-207ENST00000533728 LIASO43766 372 aa10.15□□□□□ -0.78
CHKA-207ENST00000533728 ITGB3P05106 788 aa10.15□□□□□ -0.78
CHKA-207ENST00000533728 ITGAVP06756 1048 aa10.15□□□□□ -0.78
CHKA-207ENST00000533728 FAM163BP0C2L3 166 aa10.15□□□□□ -0.78
CHKA-207ENST00000533728 ZNF865P0CJ78 1059 aaPredicted RBP10.15□□□□□ -0.78
CHKA-207ENST00000533728 KRT3P12035 628 aa10.15□□□□□ -0.78
CHKA-207ENST00000533728 MYOGP15173 224 aa10.15□□□□□ -0.78
CHKA-207ENST00000533728 SMPD1P17405 629 aa10.15□□□□□ -0.78
CHKA-207ENST00000533728 CD58P19256 250 aa10.15□□□□□ -0.78
CHKA-207ENST00000533728 KLRC2P26717 231 aa10.15□□□□□ -0.78
CHKA-207ENST00000533728 RDXP35241 583 aaKnown RBP10.15□□□□□ -0.78
CHKA-207ENST00000533728 PCK1P35558 622 aa10.15□□□□□ -0.78
CHKA-207ENST00000533728 KCNJ1P48048 391 aa10.15□□□□□ -0.78
CHKA-207ENST00000533728 RABGGTBP53611 331 aa10.15□□□□□ -0.78
CHKA-207ENST00000533728 VCPP55072 806 aaKnown RBP10.15□□□□□ -0.78
CHKA-207ENST00000533728 RPL7AP62424 266 aaKnown RBP10.15□□□□□ -0.78
CHKA-207ENST00000533728 ZP2Q05996 745 aa10.15□□□□□ -0.78
CHKA-207ENST00000533728 MYO1EQ12965 1108 aa10.15□□□□□ -0.78
CHKA-207ENST00000533728 CBLBQ13191 982 aa10.15□□□□□ -0.78
CHKA-207ENST00000533728 PTGISQ16647 500 aa10.15□□□□□ -0.78
CHKA-207ENST00000533728 WDR72Q3MJ13 1102 aa10.15□□□□□ -0.78
CHKA-207ENST00000533728 PTPN20Q4JDL3 420 aa10.15□□□□□ -0.78
CHKA-207ENST00000533728 TFDP3Q5H9I0 405 aa10.15□□□□□ -0.78
CHKA-207ENST00000533728 MARCH8Q5T0T0 291 aa10.15□□□□□ -0.78
CHKA-207ENST00000533728 MFSD14CQ5VZR4 134 aa10.15□□□□□ -0.78
CHKA-207ENST00000533728 KCTD16Q68DU8 428 aa10.15□□□□□ -0.78
CHKA-207ENST00000533728 PSRC1Q6PGN9 363 aaPredicted RBP10.15□□□□□ -0.78
CHKA-207ENST00000533728 LCLAT1Q6UWP7 414 aa10.15□□□□□ -0.78
CHKA-207ENST00000533728 TRIM67Q6ZTA4 783 aa10.15□□□□□ -0.78
CHKA-207ENST00000533728 ZNF365Q70YC5 407 aa10.15□□□□□ -0.78
CHKA-207ENST00000533728 UNC93AQ86WB7 457 aa10.15□□□□□ -0.78
CHKA-207ENST00000533728 RIBC1Q8N443 379 aaPredicted RBP10.15□□□□□ -0.78
CHKA-207ENST00000533728 SH2D3CQ8N5H7 860 aa10.15□□□□□ -0.78
CHKA-207ENST00000533728 LRRC52Q8N7C0 313 aa10.15□□□□□ -0.78
CHKA-207ENST00000533728 ARRDC4Q8NCT1 418 aa10.15□□□□□ -0.78
CHKA-207ENST00000533728 BCAS4Q8TDM0 211 aa10.15□□□□□ -0.78
CHKA-207ENST00000533728 STK32AQ8WU08 396 aa10.15□□□□□ -0.78
CHKA-207ENST00000533728 RNF25Q96BH1 459 aaPredicted RBP10.15□□□□□ -0.78
CHKA-207ENST00000533728 HPDLQ96IR7 371 aa10.15□□□□□ -0.78
CHKA-207ENST00000533728 MCEEQ96PE7 176 aa10.15□□□□□ -0.78
CHKA-207ENST00000533728 GCOM2Q9BZD3 368 aaPredicted RBP10.15□□□□□ -0.78
CHKA-207ENST00000533728 CERS4Q9HA82 394 aa10.15□□□□□ -0.78
CHKA-207ENST00000533728 CYLDQ9NQC7 956 aa10.15□□□□□ -0.78
CHKA-207ENST00000533728 DPP3Q9NY33 737 aa10.15□□□□□ -0.78
CHKA-207ENST00000533728 POLIQ9UNA4 740 aa10.15□□□□□ -0.78
CHKA-207ENST00000533728 hCG_1818297A0A087WSY0 165 aa10.14□□□□□ -0.79
CHKA-207ENST00000533728 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.14□□□□□ -0.79
CHKA-207ENST00000533728 EPOPA6NHQ4 379 aa10.14□□□□□ -0.79
CHKA-207ENST00000533728 ZNF487B1APH4 448 aa10.14□□□□□ -0.79
CHKA-207ENST00000533728 O00370 1275 aa10.14□□□□□ -0.79
CHKA-207ENST00000533728 DPYSL4O14531 572 aa10.14□□□□□ -0.79
CHKA-207ENST00000533728 RASGRF2O14827 1237 aa10.14□□□□□ -0.79
CHKA-207ENST00000533728 RGS16O15492 202 aaPredicted RBP10.14□□□□□ -0.79
CHKA-207ENST00000533728 MEFVO15553 781 aaPredicted RBP10.14□□□□□ -0.79
CHKA-207ENST00000533728 XPOTO43592 962 aaKnown RBP10.14□□□□□ -0.79
CHKA-207ENST00000533728 PQBP1O60828 265 aaKnown RBP10.14□□□□□ -0.79
CHKA-207ENST00000533728 TTC4O95801 387 aa10.14□□□□□ -0.79
CHKA-207ENST00000533728 FAM107AO95990 144 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms