RNA–Protein interactions for RNA: ENST00000533683.6

SAMD1-202, Transcript of sterile alpha motif domain containing 1, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene SAMD1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD1-202ENST00000533683 DPYSL4O14531 572 aa29.81■■■□□ 2.36
SAMD1-202ENST00000533683 DNALI1O14645 258 aaPredicted RBP29.81■■■□□ 2.36
SAMD1-202ENST00000533683 ADORA2BP29275 332 aa29.81■■■□□ 2.36
SAMD1-202ENST00000533683 LSP1P33241 339 aa29.81■■■□□ 2.36
SAMD1-202ENST00000533683 ATP11AP98196 1134 aa29.81■■■□□ 2.36
SAMD1-202ENST00000533683 GPS1Q13098 491 aa29.81■■■□□ 2.36
SAMD1-202ENST00000533683 CROCCP2Q86T23 111 aa29.81■■■□□ 2.36
SAMD1-202ENST00000533683 RFX6Q8HWS3 928 aa29.81■■■□□ 2.36
SAMD1-202ENST00000533683 FRMD8P1Q9BZ68 369 aaPredicted RBP29.81■■■□□ 2.36
SAMD1-202ENST00000533683 STAU2Q9NUL3 570 aaKnown RBP eCLIP29.81■■■□□ 2.36
SAMD1-202ENST00000533683 ABT1Q9ULW3 272 aaKnown RBP29.81■■■□□ 2.36
SAMD1-202ENST00000533683 ST3GAL5Q9UNP4 418 aa29.81■■■□□ 2.36
SAMD1-202ENST00000533683 SGK1O00141 431 aa29.81■■■□□ 2.36
SAMD1-202ENST00000533683 ENDOD1O94919 500 aa29.81■■■□□ 2.36
SAMD1-202ENST00000533683 BST2Q10589 180 aaKnown RBP29.81■■■□□ 2.36
SAMD1-202ENST00000533683 TRIM32Q13049 653 aa29.81■■■□□ 2.36
SAMD1-202ENST00000533683 KYNUQ16719 465 aa29.81■■■□□ 2.36
SAMD1-202ENST00000533683 PPP1R10Q96QC0 940 aaKnown RBP29.81■■■□□ 2.36
SAMD1-202ENST00000533683 RABEP2Q9H5N1 569 aa29.81■■■□□ 2.36
SAMD1-202ENST00000533683 MEIS3P2A8K0S8 358 aa29.8■■■□□ 2.36
SAMD1-202ENST00000533683 PRPSAP2O60256 369 aa29.8■■■□□ 2.36
SAMD1-202ENST00000533683 HUS1O60921 280 aa29.8■■■□□ 2.36
SAMD1-202ENST00000533683 SNX16P57768 344 aa29.8■■■□□ 2.36
SAMD1-202ENST00000533683 PPARDQ03181 441 aa29.8■■■□□ 2.36
SAMD1-202ENST00000533683 ADGRF2Q8IZF7 708 aa29.8■■■□□ 2.36
SAMD1-202ENST00000533683 RSAD1Q9HA92 442 aa29.8■■■□□ 2.36
SAMD1-202ENST00000533683 CALCOCO1Q9P1Z2 691 aa29.8■■■□□ 2.36
SAMD1-202ENST00000533683 RASGRF2O14827 1237 aa29.8■■■□□ 2.36
SAMD1-202ENST00000533683 RGS16O15492 202 aaPredicted RBP29.8■■■□□ 2.36
SAMD1-202ENST00000533683 CTSHP09668 335 aa29.8■■■□□ 2.36
SAMD1-202ENST00000533683 LRPAP1P30533 357 aa29.8■■■□□ 2.36
SAMD1-202ENST00000533683 SLCO1A2P46721 670 aa29.8■■■□□ 2.36
SAMD1-202ENST00000533683 BCAT1P54687 386 aa29.8■■■□□ 2.36
SAMD1-202ENST00000533683 ZDHHC17Q8IUH5 632 aa29.8■■■□□ 2.36
SAMD1-202ENST00000533683 ZCCHC9Q8N567 271 aaKnown RBP29.8■■■□□ 2.36
SAMD1-202ENST00000533683 BCAS4Q8TDM0 211 aa29.8■■■□□ 2.36
SAMD1-202ENST00000533683 SPC25Q9HBM1 224 aa29.8■■■□□ 2.36
SAMD1-202ENST00000533683 PCDH9Q9HC56 1237 aa29.8■■■□□ 2.36
SAMD1-202ENST00000533683 NINJ2Q9NZG7 142 aa29.8■■■□□ 2.36
SAMD1-202ENST00000533683 DCAF8L1A6NGE4 600 aa29.79■■■□□ 2.36
SAMD1-202ENST00000533683 IFNB1P01574 187 aa29.79■■■□□ 2.36
SAMD1-202ENST00000533683 CHRNA1P02708 482 aa29.79■■■□□ 2.36
SAMD1-202ENST00000533683 CDH6P55285 790 aa29.79■■■□□ 2.36
SAMD1-202ENST00000533683 MMRN1Q13201 1228 aa29.79■■■□□ 2.36
SAMD1-202ENST00000533683 FAM47CQ5HY64 1035 aa29.79■■■□□ 2.36
SAMD1-202ENST00000533683 RSPH3Q86UC2 560 aa29.79■■■□□ 2.36
SAMD1-202ENST00000533683 C10orf88Q9H8K7 445 aa29.79■■■□□ 2.36
SAMD1-202ENST00000533683 TPX2Q9ULW0 747 aaKnown RBP29.79■■■□□ 2.36
SAMD1-202ENST00000533683 SEPT4O43236 478 aa29.79■■■□□ 2.36
SAMD1-202ENST00000533683 SDC4P31431 198 aa29.79■■■□□ 2.36
SAMD1-202ENST00000533683 RELL1Q8IUW5 271 aa29.79■■■□□ 2.36
SAMD1-202ENST00000533683 SLC2A14Q8TDB8 520 aa29.79■■■□□ 2.36
SAMD1-202ENST00000533683 ROPN1BQ9BZX4 212 aaPredicted RBP29.79■■■□□ 2.36
SAMD1-202ENST00000533683 SENP6Q9GZR1 1112 aaPredicted RBP29.79■■■□□ 2.36
SAMD1-202ENST00000533683 ROPN1Q9HAT0 212 aaPredicted RBP29.79■■■□□ 2.36
SAMD1-202ENST00000533683 NGRNQ9NPE2 291 aaKnown RBP29.79■■■□□ 2.36
SAMD1-202ENST00000533683 APOC4-APOC2K7ER74 178 aa29.78■■■□□ 2.36
SAMD1-202ENST00000533683 APOC2P02655 101 aa29.78■■■□□ 2.36
SAMD1-202ENST00000533683 RARBP10826 455 aa29.78■■■□□ 2.36
SAMD1-202ENST00000533683 IFI35P80217 286 aaPredicted RBP29.78■■■□□ 2.36
SAMD1-202ENST00000533683 SERINC5Q86VE9 423 aa29.78■■■□□ 2.36
SAMD1-202ENST00000533683 OSTM1Q86WC4 334 aa29.78■■■□□ 2.36
SAMD1-202ENST00000533683 CLEC4CQ8WTT0 213 aa29.78■■■□□ 2.36
SAMD1-202ENST00000533683 FAM172AQ8WUF8 416 aa29.78■■■□□ 2.36
SAMD1-202ENST00000533683 FOXP3Q9BZS1 431 aa29.78■■■□□ 2.36
SAMD1-202ENST00000533683 PECAM1P16284 738 aaPredicted RBP29.77■■■□□ 2.36
SAMD1-202ENST00000533683 AUHQ13825 339 aaKnown RBP29.77■■■□□ 2.36
SAMD1-202ENST00000533683 TOP6BLQ8N6T0 577 aa29.77■■■□□ 2.36
SAMD1-202ENST00000533683 GSTCDQ8NEC7 633 aa29.77■■■□□ 2.36
SAMD1-202ENST00000533683 RBM15Q96T37 977 aaKnown RBP eCLIP29.77■■■□□ 2.36
SAMD1-202ENST00000533683 FAM105AQ9NUU6 356 aa29.77■■■□□ 2.36
SAMD1-202ENST00000533683 CWC15Q9P013 229 aaKnown RBP29.77■■■□□ 2.36
SAMD1-202ENST00000533683 IGFBP6P24592 240 aaPredicted RBP29.77■■■□□ 2.36
SAMD1-202ENST00000533683 RPL34P49207 117 aaKnown RBP29.77■■■□□ 2.36
SAMD1-202ENST00000533683 GDF10P55107 478 aa29.77■■■□□ 2.36
SAMD1-202ENST00000533683 PRKCZQ05513 592 aa29.77■■■□□ 2.36
SAMD1-202ENST00000533683 DPYSL3Q14195 570 aa29.77■■■□□ 2.36
SAMD1-202ENST00000533683 SCYL2Q6P3W7 929 aa29.77■■■□□ 2.36
SAMD1-202ENST00000533683 AGTP01019 485 aa29.76■■■□□ 2.35
SAMD1-202ENST00000533683 WARSP23381 471 aaKnown RBP29.76■■■□□ 2.35
SAMD1-202ENST00000533683 NKX3-2P78367 333 aa29.76■■■□□ 2.35
SAMD1-202ENST00000533683 CACNB2Q08289 660 aaPredicted RBP29.76■■■□□ 2.35
SAMD1-202ENST00000533683 PTGISQ16647 500 aa29.76■■■□□ 2.35
SAMD1-202ENST00000533683 LONRF1Q17RB8 773 aa29.76■■■□□ 2.35
SAMD1-202ENST00000533683 TNFAIP8L3Q5GJ75 292 aa29.76■■■□□ 2.35
SAMD1-202ENST00000533683 TNIP3Q96KP6 325 aa29.76■■■□□ 2.35
SAMD1-202ENST00000533683 ADAMTS4O75173 837 aa29.76■■■□□ 2.35
SAMD1-202ENST00000533683 TKTP29401 623 aaKnown RBP29.76■■■□□ 2.35
SAMD1-202ENST00000533683 BOLA3Q53S33 107 aa29.76■■■□□ 2.35
SAMD1-202ENST00000533683 RNASEH2BQ5TBB1 312 aaKnown RBP29.76■■■□□ 2.35
SAMD1-202ENST00000533683 MFSD5Q6N075 450 aa29.76■■■□□ 2.35
SAMD1-202ENST00000533683 B3GALNT2Q8NCR0 500 aa29.76■■■□□ 2.35
SAMD1-202ENST00000533683 MAK16Q9BXY0 300 aaKnown RBP29.76■■■□□ 2.35
SAMD1-202ENST00000533683 DNAI2Q9GZS0 605 aa29.76■■■□□ 2.35
SAMD1-202ENST00000533683 EPN3Q9H201 632 aa29.76■■■□□ 2.35
SAMD1-202ENST00000533683 CACNG4Q9UBN1 327 aa29.76■■■□□ 2.35
SAMD1-202ENST00000533683 CYB561D2O14569 222 aa29.75■■■□□ 2.35
SAMD1-202ENST00000533683 LCP1P13796 627 aa29.75■■■□□ 2.35
SAMD1-202ENST00000533683 MLH1P40692 756 aa29.75■■■□□ 2.35
SAMD1-202ENST00000533683 AFF1P51825 1210 aaKnown RBP29.75■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms