RNA–Protein interactions for RNA: ENST00000533464.5

PHRF1-205, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-205ENST00000533464 VSIG10LQ86VR7 867 aa18.21■□□□□ 0.51
PHRF1-205ENST00000533464 SH3KBP1Q96B97 665 aa18.21■□□□□ 0.51
PHRF1-205ENST00000533464 RPRD1AQ96P16 312 aaPredicted RBP18.21■□□□□ 0.51
PHRF1-205ENST00000533464 CAMTA1Q9Y6Y1 1673 aa18.21■□□□□ 0.51
PHRF1-205ENST00000533464 PLSCR1O15162 318 aa18.21■□□□□ 0.51
PHRF1-205ENST00000533464 THP07101 528 aa18.21■□□□□ 0.51
PHRF1-205ENST00000533464 PPATQ06203 517 aa18.21■□□□□ 0.51
PHRF1-205ENST00000533464 PDCD2Q16342 344 aaPredicted RBP18.21■□□□□ 0.51
PHRF1-205ENST00000533464 WDR59Q6PJI9 974 aa18.21■□□□□ 0.51
PHRF1-205ENST00000533464 DCLK3Q9C098 648 aa18.21■□□□□ 0.51
PHRF1-205ENST00000533464 GBA2Q9HCG7 927 aaPredicted RBP18.21■□□□□ 0.51
PHRF1-205ENST00000533464 SLC40A1Q9NP59 571 aa18.21■□□□□ 0.51
PHRF1-205ENST00000533464 PTPRAP18433 802 aa18.21■□□□□ 0.51
PHRF1-205ENST00000533464 CCDC60Q8IWA6 550 aaPredicted RBP18.21■□□□□ 0.51
PHRF1-205ENST00000533464 VCPIP1Q96JH7 1222 aa18.21■□□□□ 0.51
PHRF1-205ENST00000533464 ASCC2Q9H1I8 757 aaPredicted RBP18.21■□□□□ 0.51
PHRF1-205ENST00000533464 PCDHGC5Q9Y5F6 944 aa18.21■□□□□ 0.51
PHRF1-205ENST00000533464 CES2O00748 559 aa18.21■□□□□ 0.51
PHRF1-205ENST00000533464 FGRP09769 529 aa18.21■□□□□ 0.51
PHRF1-205ENST00000533464 HIST1H2AGP0C0S8 130 aaPredicted RBP18.21■□□□□ 0.51
PHRF1-205ENST00000533464 HIST1H2ADP20671 130 aa18.21■□□□□ 0.51
PHRF1-205ENST00000533464 INPP1P49441 399 aa18.21■□□□□ 0.51
PHRF1-205ENST00000533464 VCPP55072 806 aaKnown RBP18.21■□□□□ 0.51
PHRF1-205ENST00000533464 FCGRTP55899 365 aa18.21■□□□□ 0.51
PHRF1-205ENST00000533464 MAP3K7CLP57077 242 aa18.21■□□□□ 0.51
PHRF1-205ENST00000533464 PTK6Q13882 451 aa18.21■□□□□ 0.51
PHRF1-205ENST00000533464 GRIK4Q16099 956 aa18.21■□□□□ 0.51
PHRF1-205ENST00000533464 KIRREL3Q8IZU9 778 aa18.21■□□□□ 0.51
PHRF1-205ENST00000533464 PBXIP1Q96AQ6 731 aa18.21■□□□□ 0.51
PHRF1-205ENST00000533464 NSL1Q96IY1 281 aa18.21■□□□□ 0.51
PHRF1-205ENST00000533464 HIST1H2AHQ96KK5 128 aa18.21■□□□□ 0.51
PHRF1-205ENST00000533464 HIST1H2AJQ99878 128 aa18.21■□□□□ 0.51
PHRF1-205ENST00000533464 H2AFJQ9BTM1 129 aa18.21■□□□□ 0.51
PHRF1-205ENST00000533464 ITGA11Q9UKX5 1188 aa18.21■□□□□ 0.51
PHRF1-205ENST00000533464 PIK3CDO00329 1044 aa18.2■□□□□ 0.5
PHRF1-205ENST00000533464 ASPSCR1Q9BZE9 553 aa18.2■□□□□ 0.5
PHRF1-205ENST00000533464 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.2■□□□□ 0.5
PHRF1-205ENST00000533464 SASH3O75995 380 aa18.2■□□□□ 0.5
PHRF1-205ENST00000533464 SLC2A3P11169 496 aa18.2■□□□□ 0.5
PHRF1-205ENST00000533464 RPL21P46778 160 aaKnown RBP18.2■□□□□ 0.5
PHRF1-205ENST00000533464 KCNMA1Q12791 1236 aa18.2■□□□□ 0.5
PHRF1-205ENST00000533464 NFIL3Q16649 462 aa18.2■□□□□ 0.5
PHRF1-205ENST00000533464 IFNEQ86WN2 208 aa18.2■□□□□ 0.5
PHRF1-205ENST00000533464 KCND1Q9NSA2 647 aa18.2■□□□□ 0.5
PHRF1-205ENST00000533464 CDYLQ9Y232 598 aa18.2■□□□□ 0.5
PHRF1-205ENST00000533464 ALDH1A1P00352 501 aa18.2■□□□□ 0.5
PHRF1-205ENST00000533464 PYGLP06737 847 aa18.2■□□□□ 0.5
PHRF1-205ENST00000533464 PRKCIP41743 596 aa18.2■□□□□ 0.5
PHRF1-205ENST00000533464 BST2Q10589 180 aaKnown RBP18.2■□□□□ 0.5
PHRF1-205ENST00000533464 CCNJLQ8IV13 435 aa18.2■□□□□ 0.5
PHRF1-205ENST00000533464 C3orf20Q8ND61 904 aa18.2■□□□□ 0.5
PHRF1-205ENST00000533464 APOL2Q9BQE5 337 aa18.2■□□□□ 0.5
PHRF1-205ENST00000533464 ACP6Q9NPH0 428 aa18.2■□□□□ 0.5
PHRF1-205ENST00000533464 TM4SF1P30408 202 aa18.2■□□□□ 0.5
PHRF1-205ENST00000533464 ATXN3P54252 364 aaPredicted RBP18.2■□□□□ 0.5
PHRF1-205ENST00000533464 SREBF2Q12772 1141 aa18.2■□□□□ 0.5
PHRF1-205ENST00000533464 TTC30BQ8N4P2 665 aa18.2■□□□□ 0.5
PHRF1-205ENST00000533464 ASB7Q9H672 318 aa18.2■□□□□ 0.5
PHRF1-205ENST00000533464 PCDH9Q9HC56 1237 aa18.2■□□□□ 0.5
PHRF1-205ENST00000533464 DYRK4Q9NR20 520 aa18.2■□□□□ 0.5
PHRF1-205ENST00000533464 ATRNO75882 1429 aa18.2■□□□□ 0.5
PHRF1-205ENST00000533464 SYF2O95926 243 aaKnown RBP18.19■□□□□ 0.5
PHRF1-205ENST00000533464 TARSP26639 723 aaKnown RBP18.19■□□□□ 0.5
PHRF1-205ENST00000533464 ABCE1P61221 599 aaKnown RBP18.19■□□□□ 0.5
PHRF1-205ENST00000533464 TMC3Q7Z5M5 1100 aa18.19■□□□□ 0.5
PHRF1-205ENST00000533464 ADM5C9JUS6 153 aa18.19■□□□□ 0.5
PHRF1-205ENST00000533464 AKT1P31749 480 aa18.19■□□□□ 0.5
PHRF1-205ENST00000533464 TDRD10Q5VZ19 366 aaKnown RBP18.19■□□□□ 0.5
PHRF1-205ENST00000533464 MFSD7Q6UXD7 560 aa18.19■□□□□ 0.5
PHRF1-205ENST00000533464 MAGEB18Q96M61 343 aa18.19■□□□□ 0.5
PHRF1-205ENST00000533464 NAT9Q9BTE0 207 aa18.19■□□□□ 0.5
PHRF1-205ENST00000533464 HEY2Q9UBP5 337 aa18.19■□□□□ 0.5
PHRF1-205ENST00000533464 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.19■□□□□ 0.53e-6■■■■□ 19.3
PHRF1-205ENST00000533464 ASTN1O14525 1302 aa18.19■□□□□ 0.5
PHRF1-205ENST00000533464 SYCE1LA8MT33 242 aa18.19■□□□□ 0.5
PHRF1-205ENST00000533464 PDHXO00330 501 aa18.19■□□□□ 0.5
PHRF1-205ENST00000533464 C2CD2LO14523 706 aa18.19■□□□□ 0.5
PHRF1-205ENST00000533464 IFNA8P32881 189 aa18.19■□□□□ 0.5
PHRF1-205ENST00000533464 SPDYAQ5MJ70 313 aa18.19■□□□□ 0.5
PHRF1-205ENST00000533464 NLRP9Q7RTR0 991 aa18.19■□□□□ 0.5
PHRF1-205ENST00000533464 TTC30AQ86WT1 665 aa18.19■□□□□ 0.5
PHRF1-205ENST00000533464 MFN1Q8IWA4 741 aa18.19■□□□□ 0.5
PHRF1-205ENST00000533464 ARHGAP18Q8N392 663 aa18.19■□□□□ 0.5
PHRF1-205ENST00000533464 ATP6V0D2Q8N8Y2 350 aa18.19■□□□□ 0.5
PHRF1-205ENST00000533464 EPS8L1Q8TE68 723 aa18.19■□□□□ 0.5
PHRF1-205ENST00000533464 HASPINQ8TF76 798 aa18.19■□□□□ 0.5
PHRF1-205ENST00000533464 CCDC90BQ9GZT6 254 aa18.19■□□□□ 0.5
PHRF1-205ENST00000533464 NAALADL1Q9UQQ1 740 aa18.19■□□□□ 0.5
PHRF1-205ENST00000533464 PCDHB7Q9Y5E2 793 aa18.19■□□□□ 0.5
PHRF1-205ENST00000533464 SLC4A7Q9Y6M7 1214 aa18.19■□□□□ 0.5
PHRF1-205ENST00000533464 SUPT3HB4E1H0 165 aa18.19■□□□□ 0.5
PHRF1-205ENST00000533464 PDE2AO00408 941 aaPredicted RBP18.19■□□□□ 0.5
PHRF1-205ENST00000533464 SUPT3HO75486 399 aa18.19■□□□□ 0.5
PHRF1-205ENST00000533464 CCND1P24385 295 aa18.19■□□□□ 0.5
PHRF1-205ENST00000533464 NUP93Q8N1F7 819 aa18.19■□□□□ 0.5
PHRF1-205ENST00000533464 AVENQ9NQS1 362 aaPredicted RBP18.19■□□□□ 0.5
PHRF1-205ENST00000533464 PCDHGB4Q9UN71 923 aa18.19■□□□□ 0.5
PHRF1-205ENST00000533464 RIPK2O43353 540 aa18.18■□□□□ 0.5
PHRF1-205ENST00000533464 GJB6O95452 261 aa18.18■□□□□ 0.5
PHRF1-205ENST00000533464 AKAP5P24588 427 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms