RNA–Protein interactions for RNA: ENST00000532800.1

RPUSD4-207, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 2

Gene RPUSD4, Length 1,030 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-207ENST00000532800 GRAMD1CQ8IYS0 662 aa18.2■□□□□ 0.5
RPUSD4-207ENST00000532800 ELMO3Q96BJ8 720 aa18.2■□□□□ 0.5
RPUSD4-207ENST00000532800 ZC3H10Q96K80 434 aaKnown RBP18.2■□□□□ 0.5
RPUSD4-207ENST00000532800 DUSP15Q9H1R2 295 aaPredicted RBP18.2■□□□□ 0.5
RPUSD4-207ENST00000532800 SMYD3Q9H7B4 428 aa18.2■□□□□ 0.5
RPUSD4-207ENST00000532800 NXF1Q9UBU9 619 aaKnown RBP18.2■□□□□ 0.5
RPUSD4-207ENST00000532800 CPQQ9Y646 472 aa18.2■□□□□ 0.5
RPUSD4-207ENST00000532800 CNOT1A5YKK6 2376 aaKnown RBP18.19■□□□□ 0.5
RPUSD4-207ENST00000532800 A8MXQ7 604 aa18.19■□□□□ 0.5
RPUSD4-207ENST00000532800 K7EQS6 105 aa18.19■□□□□ 0.5
RPUSD4-207ENST00000532800 OAS1P00973 400 aaKnown RBP18.19■□□□□ 0.5
RPUSD4-207ENST00000532800 CYP17A1P05093 508 aa18.19■□□□□ 0.5
RPUSD4-207ENST00000532800 PFKLP17858 780 aa18.19■□□□□ 0.5
RPUSD4-207ENST00000532800 MPLP40238 635 aa18.19■□□□□ 0.5
RPUSD4-207ENST00000532800 AFMP43652 599 aa18.19■□□□□ 0.5
RPUSD4-207ENST00000532800 SNRPFP62306 86 aaKnown RBP18.19■□□□□ 0.5
RPUSD4-207ENST00000532800 TRPC3Q13507 836 aa18.19■□□□□ 0.5
RPUSD4-207ENST00000532800 PLA2G2CQ5R387 149 aa18.19■□□□□ 0.5
RPUSD4-207ENST00000532800 SFTPA1Q8IWL2 248 aa18.19■□□□□ 0.5
RPUSD4-207ENST00000532800 B3GALNT2Q8NCR0 500 aa18.19■□□□□ 0.5
RPUSD4-207ENST00000532800 B3GNT5Q9BYG0 378 aa18.19■□□□□ 0.5
RPUSD4-207ENST00000532800 ELOVL4Q9GZR5 314 aa18.19■□□□□ 0.5
RPUSD4-207ENST00000532800 MAGEF1Q9HAY2 307 aa18.19■□□□□ 0.5
RPUSD4-207ENST00000532800 CACNA1BQ00975 2339 aa18.18■□□□□ 0.5
RPUSD4-207ENST00000532800 STAU1O95793 577 aaKnown RBP18.18■□□□□ 0.5
RPUSD4-207ENST00000532800 LIMK1P53667 647 aa18.18■□□□□ 0.5
RPUSD4-207ENST00000532800 CDH8P55286 799 aa18.18■□□□□ 0.5
RPUSD4-207ENST00000532800 MESP2Q0VG99 397 aa18.18■□□□□ 0.5
RPUSD4-207ENST00000532800 C2orf27AQ580R0 203 aa18.18■□□□□ 0.5
RPUSD4-207ENST00000532800 TDRD10Q5VZ19 366 aaKnown RBP18.18■□□□□ 0.5
RPUSD4-207ENST00000532800 IL31Q6EBC2 164 aa18.18■□□□□ 0.5
RPUSD4-207ENST00000532800 TCEAL6Q6IPX3 200 aa18.18■□□□□ 0.5
RPUSD4-207ENST00000532800 C12orf56Q8IXR9 622 aa18.18■□□□□ 0.5
RPUSD4-207ENST00000532800 USP33Q8TEY7 942 aa18.18■□□□□ 0.5
RPUSD4-207ENST00000532800 TCEAL3Q969E4 200 aa18.18■□□□□ 0.5
RPUSD4-207ENST00000532800 TPSD1Q9BZJ3 242 aa18.18■□□□□ 0.5
RPUSD4-207ENST00000532800 EHD2Q9NZN4 543 aa18.18■□□□□ 0.5
RPUSD4-207ENST00000532800 EBF1Q9UH73 591 aa18.18■□□□□ 0.5
RPUSD4-207ENST00000532800 PCDHA7Q9UN72 937 aa18.18■□□□□ 0.5
RPUSD4-207ENST00000532800 INVSQ9Y283 1065 aa18.18■□□□□ 0.5
RPUSD4-207ENST00000532800 PCDHGA5Q9Y5G8 931 aa18.18■□□□□ 0.5
RPUSD4-207ENST00000532800 EXOC3O60645 756 aa18.17■□□□□ 0.5
RPUSD4-207ENST00000532800 PHACTR2O75167 634 aa18.17■□□□□ 0.5
RPUSD4-207ENST00000532800 F13A1P00488 732 aa18.17■□□□□ 0.5
RPUSD4-207ENST00000532800 FAM163BP0C2L3 166 aa18.17■□□□□ 0.5
RPUSD4-207ENST00000532800 ME1P48163 572 aa18.17■□□□□ 0.5
RPUSD4-207ENST00000532800 PPP3CCP48454 512 aa18.17■□□□□ 0.5
RPUSD4-207ENST00000532800 DGKEP52429 567 aa18.17■□□□□ 0.5
RPUSD4-207ENST00000532800 DHCR24Q15392 516 aa18.17■□□□□ 0.5
RPUSD4-207ENST00000532800 KNOP1Q1ED39 458 aaKnown RBP18.17■□□□□ 0.5
RPUSD4-207ENST00000532800 RESP18Q5W5W9 173 aa18.17■□□□□ 0.5
RPUSD4-207ENST00000532800 SCARA5Q6ZMJ2 495 aa18.17■□□□□ 0.5
RPUSD4-207ENST00000532800 CCDC33Q8N5R6 958 aa18.17■□□□□ 0.5
RPUSD4-207ENST00000532800 TSTD1Q8NFU3 115 aa18.17■□□□□ 0.5
RPUSD4-207ENST00000532800 SYAP1Q96A49 352 aaPredicted RBP18.17■□□□□ 0.5
RPUSD4-207ENST00000532800 SLITRK1Q96PX8 696 aa18.17■□□□□ 0.5
RPUSD4-207ENST00000532800 KCNK16Q96T55 309 aa18.17■□□□□ 0.5
RPUSD4-207ENST00000532800 SDCBP2Q9H190 292 aa18.17■□□□□ 0.5
RPUSD4-207ENST00000532800 CFAP97Q9P2B7 532 aa18.17■□□□□ 0.5
RPUSD4-207ENST00000532800 ABCA7Q8IZY2 2146 aa18.17■□□□□ 0.5
RPUSD4-207ENST00000532800 NUP205Q92621 2012 aa18.16■□□□□ 0.5
RPUSD4-207ENST00000532800 KMT2BQ9UMN6 2715 aaPredicted RBP18.16■□□□□ 0.5
RPUSD4-207ENST00000532800 CHD8Q9HCK8 2581 aa18.16■□□□□ 0.5
RPUSD4-207ENST00000532800 PVALEFA0A1B0GWK0 134 aa18.16■□□□□ 0.5
RPUSD4-207ENST00000532800 LRRIQ3A6PVS8 624 aaPredicted RBP18.16■□□□□ 0.5
RPUSD4-207ENST00000532800 CLSTN1O94985 981 aa18.16■□□□□ 0.5
RPUSD4-207ENST00000532800 ZSCAN22P10073 491 aaPredicted RBP18.16■□□□□ 0.5
RPUSD4-207ENST00000532800 MBL2P11226 248 aaPredicted RBP18.16■□□□□ 0.5
RPUSD4-207ENST00000532800 ATICP31939 592 aa18.16■□□□□ 0.5
RPUSD4-207ENST00000532800 SLC6A11P48066 632 aa18.16■□□□□ 0.5
RPUSD4-207ENST00000532800 BIRC3Q13489 604 aa18.16■□□□□ 0.5
RPUSD4-207ENST00000532800 PKP1Q13835 747 aa18.16■□□□□ 0.5
RPUSD4-207ENST00000532800 ELF2Q15723 593 aa18.16■□□□□ 0.5
RPUSD4-207ENST00000532800 ZNF699Q32M78 642 aa18.16■□□□□ 0.5
RPUSD4-207ENST00000532800 STPG1Q5TH74 334 aa18.16■□□□□ 0.5
RPUSD4-207ENST00000532800 FAM35AQ86V20 835 aa18.16■□□□□ 0.5
RPUSD4-207ENST00000532800 C12orf40Q86WS4 652 aa18.16■□□□□ 0.5
RPUSD4-207ENST00000532800 ADGRG2Q8IZP9 1017 aa18.16■□□□□ 0.5
RPUSD4-207ENST00000532800 NUP93Q8N1F7 819 aa18.16■□□□□ 0.5
RPUSD4-207ENST00000532800 SNX21Q969T3 373 aa18.16■□□□□ 0.5
RPUSD4-207ENST00000532800 FAM13BQ9NYF5 915 aa18.16■□□□□ 0.5
RPUSD4-207ENST00000532800 THADAQ6YHU6 1953 aa18.15■□□□□ 0.5
RPUSD4-207ENST00000532800 TM4SF5O14894 197 aa18.15■□□□□ 0.5
RPUSD4-207ENST00000532800 KLRC4O43908 158 aa18.15■□□□□ 0.5
RPUSD4-207ENST00000532800 CHRM1P11229 460 aaPredicted RBP18.15■□□□□ 0.5
RPUSD4-207ENST00000532800 HNRNPLP14866 589 aaKnown RBP eCLIP18.15■□□□□ 0.5
RPUSD4-207ENST00000532800 YWHAQP27348 245 aa18.15■□□□□ 0.5
RPUSD4-207ENST00000532800 GBP1P32455 592 aa18.15■□□□□ 0.5
RPUSD4-207ENST00000532800 CREB5Q02930 508 aa18.15■□□□□ 0.5
RPUSD4-207ENST00000532800 ANO7Q6IWH7 933 aa18.15■□□□□ 0.5
RPUSD4-207ENST00000532800 PAQR9Q6ZVX9 377 aa18.15■□□□□ 0.5
RPUSD4-207ENST00000532800 KIAA0895Q8NCT3 520 aa18.15■□□□□ 0.5
RPUSD4-207ENST00000532800 MDGA1Q8NFP4 955 aa18.15■□□□□ 0.5
RPUSD4-207ENST00000532800 SCAMP5Q8TAC9 235 aa18.15■□□□□ 0.5
RPUSD4-207ENST00000532800 PARD3BQ8TEW8 1205 aa18.15■□□□□ 0.5
RPUSD4-207ENST00000532800 FBXO32Q969P5 355 aa18.15■□□□□ 0.5
RPUSD4-207ENST00000532800 ZFRQ96KR1 1074 aaKnown RBP18.15■□□□□ 0.5
RPUSD4-207ENST00000532800 MED10Q9BTT4 135 aa18.15■□□□□ 0.5
RPUSD4-207ENST00000532800 VRTNQ9H8Y1 702 aa18.15■□□□□ 0.5
RPUSD4-207ENST00000532800 VPS45Q9NRW7 570 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms